Achromobacter insolitus and Zoogloea ramigera associated with wheat plants (Triticum aestivum)

Biology and Fertility of Soils

Volumn 44, Issue 8, 2008, Pages 1107-1112

  Sala, Valéria Marino Rodrigues ^a   Cardoso, Elke Jurandy Bran Nogueira ^a   Garboggini, Fabiana Fantinatti ^b   De Lima Nogueira, Neusa ^a   Da Silveira, Adriana Parada Dias ^c  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

^c INSTITUTO AGRONÔMICO   (Brazil)

Author keywords

Diazotrophic bacteria; Electron microscope; Identification; Root colonization

Indexed keywords

BACTERIUM; COLONIZATION; DETECTION METHOD; GENETIC ANALYSIS; ROOT COLONIZATION; SCANNING ELECTRON MICROSCOPY; WHEAT;

ACHROMOBACTER; ACHROMOBACTER INSOLITUS; AZOSPIRILLUM; AZOSPIRILLUM BRASILENSE; BACTERIA (MICROORGANISMS); TRITICUM AESTIVUM; ZOOGLOEA; ZOOGLOEA RAMIGERA;

EID: 50649108162     PISSN: 01782762     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00374-008-0292-4     Document Type: Article

References (37)

1. JI Baldani VLD Baldani 2005 History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience An Acad Bras Cienc 77 549 579
2. H Bertrand C Plassard X Pinochet B Touraine P Normand JC Cleyet-Marel 2000 Stimulation of the ionic transport system in Brassica napus by a plant growth-promoting rhizobacterium (Achromobacter sp.) Can J Microbiol 46 229 236
3. 2-fixing Zoogloea-forming bacterium from kallar grass histoplane J Appl Bacteriol 62 289 294
4. Döbereiner J, Baldani JI, Baldani VLD (1995) Como isolar e identificar bactérias diazotróficas de plantas não leguminosas. EMBRAPA, SPI, Brasília and EMBRAPA, CNPAB, Itaguaí
5. B Ewing L Hillier M Wendl P Green 1998 Basecalling of automated sequencer traces using phred. I. Accuracy assessment Genome Res 8 175 185
6. JJ Germida SD Siciliano 2001 Taxonomic diversity of bacteria associated with the roots of modern, recent and ancient wheat cultivars Biol Fertil Soil 33 410 415
7. JJ Germida SD Siciliano JR Freitas AM Seib 1998 Diversity of root-associated bacteria with field-grown canola (Brassica napus L.) and wheat (Triticum aestivum L.) FEMS Microbiol Ecol 26 43 50
8. LP Gerk K Gilchrist IR Kennedy 2000 Mutants with enhance nitrogenase activity in hydroponic Azospirillum brasilense-wheat associations Appl Environ Microbiol 66 2175 2184
9. JJ Godon E Zumstein P Dabert F Habouzit R Moletta 1997 Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis Appl Environ Microbiol 63 2802 2813
10. RD Goertz RM Pengra 1960 Physiology of nitrogen fixation by a species of Achromobacter J Bacteriol 81 568 572
11. P Gyaneshwar EK James N Mathan PM Reddy B Reinhold-Hurek JK Ladha 2001 Endophytic colonization of rice by diazotrophic strain of Serratia marcescens J Bacteriol 183 2634 2645
12. P Gyaneshwar EK James PM Reddy JK Ladha 2002 Herbaspirillum colonization increases accumulation in aluminium-tolerant rice varieties New Phytologist 154 131 145
13. Y Hashidoko M Tada S Tahara 2002 Soft gel medium solidified with gellan gum for preliminary screening for root-associating, free-living nitrogen-fixing bacteria inhabiting the rhizoplane of plants Biosci Biotechnol Biochem 66 2259 2263
14. Hoagland DR, Arnon DI (1950) The water-culture method for growing plants without soil. University of California, Irvine
15. AL Iniguez Y Dong EW Triplett 2004 Nitrogen fixation in wheat provided by Klebsiella pneumoniae 342 Mol Plant-Microb Interact 17 1078 1085
16. EK James 2000 Nitrogen fixation in endophytic and associative symbiosis Field Crops Res 65 197 209
17. EK James FL Olivares 1997 Infection and colonization of sugar cane and other graminaceous plants by endophytic diazotrophs Crit Rev Plant Sci 17 77 119
18. M Kimura 1980 A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences J Mol Evol 16 111 120
19. S Kumar K Tamura IB Jakobsen M Nei 2001 MEGA2: molecular evolutionary genetics analysis software, Arizona State University, Tempe, Arizona, USA Bioinformatics 17 1244 1245
20. Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Academic, Chichester, UK, pp 115-175
21. H Levanony Y Bashan B Romano E Klein 1989 Ultrastructural localization and identification of Azospirillum brasilense Cd on and within wheat root by immuno-gold labeling Plant and Soil 117 207 218
22. Y Liu S Chen J Li 2003 Colonization pattern of Azospirillum brasilense Yu62 on maize roots Acta Botânica Sínese 45 748 752
23. S Mayak T Tirosh B Glick 2004 Plant growth-promoting bacteria that confer resistance in tomato plants to salt stress Plant Physiol Biochem 42 565 572
24. S Mayak T Tirosh B Glick 2004 Plant growth-promoting bacteria that confer resistance to water stress in tomatoes and peppers Plant Sci 166 525 530
25. AB Norberg S Enfors 1982 Production of extracellular polysaccharide by Zoogloea ramigera Appl Environ Microbiol 44 1231 1237
26. M Pesaro F Widmer 2006 Identification and specific detection of a novel Pseudomonadaceae cluster associated with soils from winter wheat plots of a long-term agricultural field experiment Appl Environ Microbiol 72 37 43
27. Pinton R, Varanini Z, Nannipieri P (2001) The rhizosphere. Biochemistry and organic substances at the soil-plant interface. Marcel Dekker, New York
28. DG Pitcher NA Saunders RJ Owens 1989 Rapid extraction of bacterial genomic DNA with guanidium thiocyanate Lett Appl Microbiol 8 151 156
29. N Saito M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
30. T Saito H Saegusa Y Myata T Fukiu 1992 Intracellular degradation of poly(3-hydroxybutyrate) granules of Zoogloea ramigera I-16-M FEMS Microbiol Rev 103 333 338
31. VMR Sala SS Freitas VP Donzeli JG Freitas PB Gallo APD Silveira 2005 Ocorrência e efeito de bactérias diazotróficas em genótipos de trigo Revista Brasileira de Ciência do Solo 29 345 352
32. VMR Sala SS Freitas APD Silveria 2007 Interaction between arbuscular mycorrhizal fungi and diazotrophic bacteria in wheat plants Pesq Agropec Bras 42 1593 1600
33. VMR Sala EJBN Cardoso JG Freitas APD Silveria 2007 Wheat genotype response to inoculation of diazotrophic bacteria in field conditions Pesq Agropec Bras 44 846 849
34. O Steenhoudt J Vaderleyden 2000 Azospirillum, a free-living nitrogen-fixing bacterium closely associated with grasses: genetic, biochemical and ecological aspects FEMS Microbiol Rev 24 487 506
35. JD Thompson DG Higgins TJ Gibson W Clustal 1994 Improving the sensitivity of progressive multiple alignment through sequence weighting, positions-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
36. YG Yanni RY Rizk V Corich A Squartini K Ninke S Philip-Hollingsworth G Orgambide FD Bruijn J Stoltzfus D Buckley TM Schmidt PF Mateos JK Ladha FB Dazzo 1997 Natural endophytic associations between Rhizobium leguminosarum bv. Trifolii and rice roots and assessment of its potential to promote rice growth Plant and Soil 194 99 114
37. DK Zinniel P Lambrecht B Harris Z Feng D Kuczmarski P Higley CA Ishimaru A Arunakumari R Barletta AK Vidaver 2002 Isolation and characterization of endophytic colonizing bacteria from agronomic crops and prairie plants Appl Environ Microbiol 68 2198 2208