Natural endophytic association between Rhizobium leguminosarum bv. trifolii and rice roots and assessment of its potential to promote rice growth

Plant and Soil

Volumn 194, Issue 1-2, 1997, Pages 99-114

  Yanni, Youssef G ^a   Rizk, R Y ^a   Corich, V ^b   Squartini, A ^b   Ninke, K ^c,d   Philip Hollingsworth, S ^c   Orgambide, G ^c   De Bruijn, F ^c,d   Stoltzfus, J ^d   Buckley, D ^c,d   Schmidt, T M ^c,d   Mateos, P F ^e   Ladha, J K ^f   Dazzo, Frank B ^c,d  

^a Sakha Agricultural Research Station   (Egypt)

^b UNIVERSITY OF PADOVA   (Italy)

^c Michigan State University ^*  (United States)

^d MICHIGAN STATE UNIVERSITY   (United States)

^e UNIVERSITY OF SALAMANCA   (Spain)

^f INTERNATIONAL RICE RESEARCH INSTITUTE   (Philippines)

Author keywords

Association; Clover; Endophyte; PGPR; Rhizobium leguminosarum bv. trifolii; Rice; Root; Symbiosis

Indexed keywords

ENDOPHYTIC ASSOCIATION; GROWTH; NITROGEN FIXATION; RICE;

EGYPT;

ORYZA SATIVA; POACEAE; RHIZOBIUM; RHIZOBIUM LEGUMINOSARUM; RHIZOBIUM LEGUMINOSARUM BV. TRIFOLII; RHIZOBIUM LEGUMINOSARUM TRIFOLII; TRIFOLIUM; TRIFOLIUM ALEXANDRINUM;

EID: 9844233174     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-94-011-5744-5_10     Document Type: Conference Paper

References (60)

1. Abdel Wahab A M, Zahran H H, Abd-Alla M H 1996 Root-hair infection and nodulation of four grain legumes as affected by the form and the application time of nitrogen fertilizer. Folia Microbiol. 41, 303-308.
2. Balandreau J and Knowles R 1978 The rhizosphere. In Interactions Between Non-Pathogenic Soil Microorganisms and Plants. Eds. Y R Dommergues, S V Krupa. pp 243-268, Elsevier, Amsterdam.
3. 2-fixing bacteria in a rice rhizosphere. Can. J. Microbiol. 29, 881-887.
4. 2-fixing zoogloea-forming bacterium from kallar grass histoplane. J. Appl. Bacteriol. 62, 289-294.
5. Black A D, Evans F, Ensminger J, White F, Clar J and Dinaver R1965 Methods of Soil Analysis - II. Chemical and Microbiological Properties. No. 9 in the Series of Agronomy, American Society for Agronomy, Madison, WI.
6. Boddey R and Dobereiner J 1988 Nitrogen fixation associated with grasses and cereals: recent results and perspectives for future research. Plant Soil 108, 53-65.
7. Chabot R H, Antoun H, Kloepper J and Beauchamp C 1996 Root colonization of maize and lettuce by bioluminescent Rhizobium leguminosarum biovar phaseoli. Appl. Environ. Microbiol. 62, 2767-2772.
8. Cocking E C, Davey M R, Kothari S L, Srivastava J S, Jing Y, Ridge R W and Rolfe B G 1992 Altering the specificity control of the interaction between rhizobia and plants. Symbiosis 14, 123-130.
9. Corich V, Giacomini A, Ollero F J, Squartini A and Nuti M P 1991 Pulsed-field electrophoresis in contour-clamped homogeneous electric fields (CHEF) for the fingerprinting of Rhizobium spp. FEMS Microbiol. Lett. 83, 193-198.
10. Dazzo F B 1982 Leguminous root nodules. In Experimental Microbial Ecology. Ed. J Slater and R Burns, pp 431-446. Blackwell Scientific Publications, Oxford, UK.
11. Dazzo F B and Brill W J 1978 Regulation by fixed nitrogen of host-symbiont recognition in the Rhizobium-clover symbiosis. Plant Physiol. 62, 18-21.
12. Dazzo F B, Orgambide G G, Philip-Hollingsworth S, Hollingsworth R I, Ninke K O and Salzwedel J L 1996 Modulation of development, growth dynamics, wall crystallinity, and infection sites in white clover root hairs by membrane chitolipooligosaccharides from Rhizobium leguminosarum biovar trifolii. J. Bacteriol. 178, 3621-3627.
13. Dazzo F B and Petersen J 1989 Applications of computer-assisted image analysis for microscopical studies of the Rhizobium-legume symbiosis. Symbiosis 7, 193-210.
14. de Bruijn F J, Jing Y and Dazzo F B 1995 Potentials and pitfalls of trying to extend symbiotic interactions of nitrogen-fixing organisms to presently non-nodulated plants, such as rice. Plant Soil 174, 225-240.
15. DeSoete G 1984 Additive-tree representations of incomplete dissimilarity data. Quality Quantity 18, 387-393.
16. Dobereiner J, Reis V, Paula M and Olivares F 1993 Endophytic diazotrophs in sugar cane, cereals, and tuber plants. In New Horizons in Nitrogen Fixation. Eds. R Palacios, J Mora and W E Newton, pp 671-679. Kluwer Academic Publishers, Dordrecht, The Netherlands.
17. Eckhardt T 1978 A rapid method for the identification of plasmid deoxyribonucleic acid in bacteria. Plasmid 1, 584-588.
18. Espuny M R, Ollero F J, Bellogin R A, Ruiz-Sainz J E and Perez-Silva J 1987 Transfer of the Rhizobium leguminosarum biovar trifolii symbiotic plasmid pRtr5a to a strain of Rhizobium sp. that nodulates Hedysarum coronarium. J. Appl. Bacteriol. 63, 13-20.
19. Graves W L, Williams W A, Wegrzyn V A, Calderon D, George M R and Sullins J L 1987 Berseem clover is getting a second chance. California Agriculture September-October 1987, pp 15-18.
20. Gough C, Webster G, Vasse J, Galera C, Batchelor C, O'Callaghan K, Davey M, Denarie J and Cocking E 1996 Intercellular infection of wheat and Arabidopsis by rhizobial strains. Abstr. S-45, 8th International Congress on Molecular Plant-Microbe Interactions, Knoxville, TN.
21. Hashem F M and Kuykendall D 1994 Plasmid DNA content of several agronomically important Rhizobium species that nodulate alfalfa, berseem clover, or Leucaena. In Symbiotic Nitrogen Fixation. Eds. P Graham, M Sadowsky and C Vance. pp 181-188. Kluwer Academic Publishers, Dordrecht, The Netherlands.
22. Holflich G, Wiehe W and Hecht-Bucholz C 1995 Rhizosphere colonization of different crops with growth promoting Pseudomonas and Rhizobium bacteria. Microbiol. Res. 150, 139-147.
23. Hollingsworth R I, Squartini A, Philip-Hollingsworth S and Dazzo F B 1989 Root hair deforming and nodule initiating factors from Rhizobium trifolii. In Signal Molecules in Plants and Plant-Microbe Interactions. Ed. B Lugtenberg. pp 387-393. Springer-Verlag, Berlin, Germany.
24. Hurek T, Reinhold-Hurek B, van Montague M, and Kellenberger E 1994 Root colonization and systemic spreading of Azoarcus sp. strain BH72 in grasses. J. Bacteriol. 176, 1913-1923.
25. International Rice Research Institute 1996 IRRI towards 2020. International Rice Research Institute. P.O. Box 933, Manila, Philippines. 43 p.
26. Khush G S and Bennett J 1992 Nodulation and Nitrogen fixation in rice: Potential and prospects. International Rice Research Institute Press, Manila, Philippines. 136 p.
27. Klein D A, Salzwedel J L and Dazzo F B 1990 Microbial colonization of plant roots. In Biotechnology of Plant-Microbe Interactions. Eds. J P Nakas and C Hagedorn. pp 189-225. McGraw-Hill Publishing Company, NY.
28. Kloepper J W, Schippers B and Bakker P A 1992 Proposed elimination of the term endorhizosphere. Phytopathol. 82, 726-727.
29. Ladha J K 1986 Studies on nitrogen fixation by free-living and rice-plant associated bacteria in wetland rice field. Bionature 6, 47-58.
30. Ladha J K, Tirol-Padre A, Reddy K and Ventura W 1993 Prospects and problems of biological nitrogen fixation in rice production: a critical assessment. In New Horizons in Nitrogen Fixation. Eds. R Palacios, J Mora and W E Newton, pp 677-682. Kluwer Academic Publishers, Dordrecht, The Netherlands.
31. Ladha J K, Garcia M, Miyan S, Padre A T and Watanabe I 1989 Survival of Azorhizobium caulinodans in the soil and rhizosphere of wetland rice under Sesbania rostrata-rice rotation. Appl. Environ. Microbiol. 55, 454-460.
32. Ladha J K, So R, Hernandez R, Dazzo F B, Reddy P M, Angeles O R, Ramos M C, de Bruijn F J and Stoltzfus J 1996a Rhizobial invasion and induction of phenotypic changes in rice roots are independent of Nod factors. Proceedings 8th International Congress on Molecular Plant-Microbe Interactions (Abstr. #L-11), Knoxville, TN.
33. Laemmli U 1970 Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London) 227, 680-685.
34. Larsen N, Olsen G, Maidak B, McCaughey M, Overbeek R, Macke T, Marsch T and Woese CR 1993 The ribosomal database project. Nucl. Acid Res. 21, 3021-3032.
35. Mateos P, Jiminez J, Chen J, Squartini A, Martinez-Molina E, Hubbell D H and Dazzo F B 1992 Cell-associated pectinolytic and cellulolytic enzymes in Rhizobium trifolii. Appl. Environ. Microbiol. 58, 1816-1822.
36. 2-Fixation Conference (Abstr. P104), Szeged, Hungary.
37. Ndoye I, DeBilly F, Vasse J, Dreyfus B and Truchet G 1994 Root nodulation of Sesbania rostrada. J. Bacteriol. 176, 1060-1068.
38. Old K and Nicolson T 1975 Electron microscopical studies of the microflora of roots of sand dune grasses. New Phytol. 74, 51-58.
39. Old K and Nicolson T 1978 The root cortex as part of a microbial continuum. In Microbial Ecology. Eds. M Loutit and J Miles, pp 291-294. Springer-Verlag, NY.
40. Okon Y and Labandera-Gonzalez C A 1994 Agronomic applications of Azospirillum: an evaluation of 20 years worldwide field inoculation. Soil Biol. Biochem. 26, 1591-1601.
41. Orgambide G, Lee J, Hollingsworth R and Dazzo F B 1995 Structurally diverse chitolipooligosaccharide Nod factors accumulate primarily in membranes of wild type Rhizobium leguminosarum bv. trifolii. Biochemistry 34, 3832-3840.
42. Orgambide G, Philip-Hollingsworth S, Hollingsworth R I and Dazzo F B 1994 Flavone-enhanced accumulation and symbiosis-related biological activity of a diglycosyl diacylglycerol membrane glycolipid from Rhizobium leguminosarum bv. trifolii. J. Bacteriol. 176, 4338-4347.
43. Orgambide G, Philip-Hollingsworth S, Mateos P F, Hollingsworth R I and Dazzo F B 1996 Subnanomolar concentrations of membrane chitolipooligosaccharides from Rhizobium leguminosarum bv. trifolii are fully capable of eliciting symbiosis-related responses on white clover. Plant Soil, 186, 93-98.
44. Philip-Hollingsworth S, Hollingsworth R I and Dazzo F B 1989 Host-range related structural features of the acidic extracellular polysaccharides of Rhizobium trifolii and Rhizobium leguminosarum. J. Biol. Chem. 264, 1461-1466.
45. Philip-Hollingsworth S, Hollingsworth R I and Dazzo F B 1991 N-acetylglutamic acid: an extracellular Nod signal of Rhizobium trifolii ANU843 which induces root hair branching and nodule-like primordia in white clover roots. J. Biol. Chem. 266, 16854-16858.
46. Reddy P M, Ladha J K, So R, Hernandez R, Dazzo F B, Angeles O R, Ramos M C and de Bruijn F J 1997 Rhizobial communication with rice: induction of phenotypic changes, mode of invasion and extent of colonization. Plant Soil 194, 81-98.
47. Roger P and Ladha J K 1992 Biological nitrogen fixation in wetland rice fields: estimation and contribution to nitrogen balance. Plant Soil 141, 41-55.
48. Roger P A and Watanabe I W 1986 Technologies for utilizing biological nitrogen fixation in wetland rice: potentialities, current usage, and limiting factors. Pert. Res. 9, 39-77.
49. 2-fixing bacteria to cereal roots. Appl. Environ. Microbiol. 38, 447-453.
50. Smucker A J 1993 Soil environmental modifications of root dynamics and measurement. Annu. Rev. Phytopathol. 31, 191-216.
51. Somasegaran P and Holben H J 1985 Methods in Legume-Rhizobium Technology. NifTAL Project, University of Hawaii, Maui, Hawaii. 367 p.
52. Spencer D, James E K, Ellis G J, Shaw J E and Sprent J I 1994 Interaction between rhizobia and potato tissues. J. Exp. Bot. 45, 1475-1482.
53. Subba-Rao N S, Mateos P F, Baker D, Pankratz H S, Palma J, Dazzo F B and Sprent J I 1995 The unique root-nodule symbiosis between Rhizobium and the aquatic legume, Neptunia natans (L. f.) Druce. Planta 196, 311-320.
54. Tien T, Gaskins M H and Hubbell D H 1979 Plant growth substances produced by Azospirillum brasilense and their effect on the growth of pearl millet (Pennisetum americanum L.). Appl. Environ. Microbiol. 37, 1016-1024.
55. 2-fixing bacterial diversity detected in rice roots by molecular evolutionary analysis of nifH gene sequences. J. Bacteriol. 177, 1414-1417.
56. Umali-Garcia M, Hubbell D H, Gaskins M H and Dazzo F B 1980 Association of Azospirillum with grass roots. Appl. Environ. Microbiol. 39, 219-226.
57. Versalovic J, Schneider M, de Bruijn F J and Lupski J R 1994 Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Methods Molec Cell. Biol 5, 25-40.
58. Willems A and Collins M D 1993 Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequences. Int. J. Syst. Bacteriol. 43, 305-313.
59. Yanni Y G 1991 Potential of indigenous cyanobacteria to contribute to rice performance under different schedules of nitrogen application. World J. Microbiol. Biotech. 7, 48-52.
60. Young J P and Haukka K E 1996 Diversity and phylogeny of rhizobia. New Phytol. 133, 87-94.