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Volumn 105, Issue 34, 2008, Pages 12101-12107

Dissecting the roles of MuB in Mu transposition: ATP regulation of DNA binding is not essential for target delivery

Author keywords

ATP ADP switch; Genetic recombination; Transposition immunity; Transposition targeting; Transposon target

Indexed keywords

ADENOSINE TRIPHOSPHATE; DNA BINDING PROTEIN; HYBRID PROTEIN; MUA TRANSPOSASE; MUB TRANSPOSASE; NUCLEOTIDE; REPRESSOR PROTEIN; TRANSPOSASE; UNCLASSIFIED DRUG;

EID: 50449093490     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0805868105     Document Type: Article
Times cited : (6)

References (45)
  • 1
    • 0242636324 scopus 로고    scopus 로고
    • The outs and ins of transposition: From Mu to kangaroo
    • Curcio MJ, Derbyshire KM (2003) The outs and ins of transposition: From Mu to kangaroo. Nat Rev Mol Cell Biol 4:865-877.
    • (2003) Nat Rev Mol Cell Biol , vol.4 , pp. 865-877
    • Curcio, M.J.1    Derbyshire, K.M.2
  • 2
    • 21144436287 scopus 로고    scopus 로고
    • Genetic evidence that GTP is required for transposition of IS903 and Tn552 in Escherichia coli
    • Coros AM, Twiss E, Tavakoli NP, Derbyshire KM (2005) Genetic evidence that GTP is required for transposition of IS903 and Tn552 in Escherichia coli. J Bacteriol 187:4598-4606.
    • (2005) J Bacteriol , vol.187 , pp. 4598-4606
    • Coros, A.M.1    Twiss, E.2    Tavakoli, N.P.3    Derbyshire, K.M.4
  • 3
    • 0026638840 scopus 로고
    • P element transposition in vitro proceeds by a cut-and-paste mechanism and uses GTP as a cofactor
    • Kaufman PD, Rio DC (1992) P element transposition in vitro proceeds by a cut-and-paste mechanism and uses GTP as a cofactor. Cell 69:27-39.
    • (1992) Cell , vol.69 , pp. 27-39
    • Kaufman, P.D.1    Rio, D.C.2
  • 4
    • 22344432173 scopus 로고    scopus 로고
    • Guanosine triphosphate acts as a cofactor to promote assembly of initial P-element transposase-DNA synaptic complexes
    • Tang M, Cecconi C, Kim H, Bustamante C, Rio DC (2005) Guanosine triphosphate acts as a cofactor to promote assembly of initial P-element transposase-DNA synaptic complexes. Genes Dev 19:1422-1425.
    • (2005) Genes Dev , vol.19 , pp. 1422-1425
    • Tang, M.1    Cecconi, C.2    Kim, H.3    Bustamante, C.4    Rio, D.C.5
  • 5
    • 0037447298 scopus 로고    scopus 로고
    • Regulation of RAG1/RAG2-mediated transposition by GTP and the C-terminal region of RAG2
    • Tsai CL, Schatz DG (2003) Regulation of RAG1/RAG2-mediated transposition by GTP and the C-terminal region of RAG2. EMBO J 22:1922-1930.
    • (2003) EMBO J , vol.22 , pp. 1922-1930
    • Tsai, C.L.1    Schatz, D.G.2
  • 6
    • 0023122585 scopus 로고
    • B protein of bacteriophage Mu is an ATPase that preferentially stimulates intermolecular DNA strand transfer
    • Maxwell A, Craigie R, Mizuuchi K (1987) B protein of bacteriophage Mu is an ATPase that preferentially stimulates intermolecular DNA strand transfer. Proc Natl Acad Sci USA 84:699-703.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 699-703
    • Maxwell, A.1    Craigie, R.2    Mizuuchi, K.3
  • 7
    • 0024294381 scopus 로고
    • Target immunity of Mu transposition reflects a differential distribution of Mu B protein
    • Adzuma K, Mizuuchi K (1988) Target immunity of Mu transposition reflects a differential distribution of Mu B protein. Cell 53:257-266.
    • (1988) Cell , vol.53 , pp. 257-266
    • Adzuma, K.1    Mizuuchi, K.2
  • 8
    • 0026524585 scopus 로고
    • Purification and characterization of TnsC, a Tn7 transposition protein that binds ATP and DNA
    • Gamas P, Craig NL (1992) Purification and characterization of TnsC, a Tn7 transposition protein that binds ATP and DNA. Nucleic Acids Res 20:2525-2532.
    • (1992) Nucleic Acids Res , vol.20 , pp. 2525-2532
    • Gamas, P.1    Craig, N.L.2
  • 9
    • 0030859543 scopus 로고    scopus 로고
    • Avoiding self: Two Tn7-encoded proteins mediate target immunity in Tn7 transposition
    • Stellwagen AE, Craig NL (1997) Avoiding self: Two Tn7-encoded proteins mediate target immunity in Tn7 transposition. EMBO J 16:6823-6834.
    • (1997) EMBO J , vol.16 , pp. 6823-6834
    • Stellwagen, A.E.1    Craig, N.L.2
  • 10
    • 0032429191 scopus 로고    scopus 로고
    • Mobile DNA elements: Controlling transposition with ATP-dependent molecular switches
    • Stellwagen AE, Craig NL (1998) Mobile DNA elements: Controlling transposition with ATP-dependent molecular switches. Trends Biochem Sci 23:486-490.
    • (1998) Trends Biochem Sci , vol.23 , pp. 486-490
    • Stellwagen, A.E.1    Craig, N.L.2
  • 11
    • 0028317055 scopus 로고
    • Identification of residues in the Mu transposase essential for catalysis
    • Baker TA, Luo L (1994) Identification of residues in the Mu transposase essential for catalysis. Proc Natl Acad Sci USA 91:6654-6658.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 6654-6658
    • Baker, T.A.1    Luo, L.2
  • 12
    • 0029129435 scopus 로고
    • Structure of the bacteriophage Mu transposase core: A common structural motif for DNA transposition and retroviral integration
    • Rice P, Mizuuchi K (1995) Structure of the bacteriophage Mu transposase core: A common structural motif for DNA transposition and retroviral integration. Cell 82:209-220.
    • (1995) Cell , vol.82 , pp. 209-220
    • Rice, P.1    Mizuuchi, K.2
  • 13
    • 0021676867 scopus 로고
    • Site-specific recognition of the bacteriophage Mu ends by the Mu A protein
    • Craigie R, Mizuuchi M, Mizuuchi K (1984) Site-specific recognition of the bacteriophage Mu ends by the Mu A protein. Cell 39:387-394.
    • (1984) Cell , vol.39 , pp. 387-394
    • Craigie, R.1    Mizuuchi, M.2    Mizuuchi, K.3
  • 14
    • 0025899314 scopus 로고
    • Inversion of the phosphate chirality at the target site of Mu DNA strand transfer: Evidence for a one-step transesterification mechanism
    • Mizuuchi K, Adzuma K (1991) Inversion of the phosphate chirality at the target site of Mu DNA strand transfer: Evidence for a one-step transesterification mechanism. Cell 66:129-140.
    • (1991) Cell , vol.66 , pp. 129-140
    • Mizuuchi, K.1    Adzuma, K.2
  • 15
    • 0029871975 scopus 로고    scopus 로고
    • The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis
    • Aldaz H, Schuster E, Baker TA (1996) The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis. Cell 85:257-269.
    • (1996) Cell , vol.85 , pp. 257-269
    • Aldaz, H.1    Schuster, E.2    Baker, T.A.3
  • 16
    • 0032125708 scopus 로고    scopus 로고
    • The same two monomers within a MuA tetramer provide the DDE domains for the strand cleavage and strand transfer steps of transposition
    • Namgoong SY, Harshey RM (1998) The same two monomers within a MuA tetramer provide the DDE domains for the strand cleavage and strand transfer steps of transposition. EMBO J 17:3775-3785.
    • (1998) EMBO J , vol.17 , pp. 3775-3785
    • Namgoong, S.Y.1    Harshey, R.M.2
  • 17
    • 0033569428 scopus 로고    scopus 로고
    • Organization and dynamics of the Mu transpososome: Recombination by communication between two active sites
    • Williams TL, Jackson EL, Carritte A, Baker TA (1999) Organization and dynamics of the Mu transpososome: Recombination by communication between two active sites. Genes Dev 13:2725-2737.
    • (1999) Genes Dev , vol.13 , pp. 2725-2737
    • Williams, T.L.1    Jackson, E.L.2    Carritte, A.3    Baker, T.A.4
  • 18
    • 0025794342 scopus 로고
    • MuB protein allosterically activates strand transfer by the transposase of phage Mu
    • Baker TA, Mizuuchi M, Mizuuchi K (1991) MuB protein allosterically activates strand transfer by the transposase of phage Mu. Cell 65:1003-1013.
    • (1991) Cell , vol.65 , pp. 1003-1013
    • Baker, T.A.1    Mizuuchi, M.2    Mizuuchi, K.3
  • 19
    • 0025953885 scopus 로고
    • Stimulation of the Mu DNA strand cleavage and intramolecular strand transfer reactions by the Mu B protein is independent of stable binding of the Mu B protein to DNA
    • Surette MG, Chaconas G (1991) Stimulation of the Mu DNA strand cleavage and intramolecular strand transfer reactions by the Mu B protein is independent of stable binding of the Mu B protein to DNA. J Biol Chem 266:17306-17313.
    • (1991) J Biol Chem , vol.266 , pp. 17306-17313
    • Surette, M.G.1    Chaconas, G.2
  • 20
    • 0032530649 scopus 로고    scopus 로고
    • An ATP-ADP switch in MuB controls progression of the Mu transposition pathway
    • Yamauchi M, Baker TA (1998) An ATP-ADP switch in MuB controls progression of the Mu transposition pathway. EMBO J 17:5509-5518.
    • (1998) EMBO J , vol.17 , pp. 5509-5518
    • Yamauchi, M.1    Baker, T.A.2
  • 21
    • 0036282822 scopus 로고    scopus 로고
    • Direct observation of single MuB polymers: Evidence for a DNA-dependent conformational change for generating an active target complex
    • Greene EC, Mizuuchi K (2002) Direct observation of single MuB polymers: Evidence for a DNA-dependent conformational change for generating an active target complex. Mol Cell 9:1079-1089.
    • (2002) Mol Cell , vol.9 , pp. 1079-1089
    • Greene, E.C.1    Mizuuchi, K.2
  • 22
    • 0023441547 scopus 로고
    • Mini-Mu transduction: Cis inhibition of the insertion of Mud transposons
    • Reyes O, Beyou A, Mignotte-Vieux C, Richaud F (1987) Mini-Mu transduction: Cis inhibition of the insertion of Mud transposons. Plasmid 18:183-192.
    • (1987) Plasmid , vol.18 , pp. 183-192
    • Reyes, O.1    Beyou, A.2    Mignotte-Vieux, C.3    Richaud, F.4
  • 23
    • 0024349092 scopus 로고
    • Transposon Tn7: Cis-acting sequences in transposition and transposition immunity
    • Arciszewska LK, Drake D, Craig NL (1989) Transposon Tn7: Cis-acting sequences in transposition and transposition immunity. J Mol Biol 207:35-52.
    • (1989) J Mol Biol , vol.207 , pp. 35-52
    • Arciszewska, L.K.1    Drake, D.2    Craig, N.L.3
  • 24
    • 0021061260 scopus 로고
    • Identification of a transposon Tn3 sequence required for transposition immunity
    • Lee CH, Bhagwat A, Heffron F (1983) Identification of a transposon Tn3 sequence required for transposition immunity. Proc Natl Acad Sci USA 80:6765-6769.
    • (1983) Proc Natl Acad Sci USA , vol.80 , pp. 6765-6769
    • Lee, C.H.1    Bhagwat, A.2    Heffron, F.3
  • 25
    • 0030281753 scopus 로고    scopus 로고
    • A cell-free system of Tn3 transposition and transposition immunity
    • Maekawa T, Yanagihara K, Ohtsubo E (1996) A cell-free system of Tn3 transposition and transposition immunity. Genes Cells 1:1007-1016.
    • (1996) Genes Cells , vol.1 , pp. 1007-1016
    • Maekawa, T.1    Yanagihara, K.2    Ohtsubo, E.3
  • 26
    • 0035026052 scopus 로고    scopus 로고
    • Mu and IS1 transpositions exhibit strong orientation bias at the Escherichia coli bgl locus
    • Manna D, Wang X, Higgins NP (2001) Mu and IS1 transpositions exhibit strong orientation bias at the Escherichia coli bgl locus. J Bacteriol 183:3328-3335.
    • (2001) J Bacteriol , vol.183 , pp. 3328-3335
    • Manna, D.1    Wang, X.2    Higgins, N.P.3
  • 28
    • 0037086543 scopus 로고    scopus 로고
    • Dynamics of a protein polymer: The assembly and disassembly pathways of the MuB transposition target complex
    • Greene EC, Mizuuchi K (2002) Dynamics of a protein polymer: The assembly and disassembly pathways of the MuB transposition target complex. EMBO J 21:1477-1486.
    • (2002) EMBO J , vol.21 , pp. 1477-1486
    • Greene, E.C.1    Mizuuchi, K.2
  • 29
    • 0036923696 scopus 로고    scopus 로고
    • Target immunity during Mu DNA transposition: Transpososome assembly and DNA looping enhance MuA-mediated disassembly of the MuB target complex
    • Greene EC, Mizuuchi K (2002) Target immunity during Mu DNA transposition: Transpososome assembly and DNA looping enhance MuA-mediated disassembly of the MuB target complex. Mol Cell 10:1367-1378.
    • (2002) Mol Cell , vol.10 , pp. 1367-1378
    • Greene, E.C.1    Mizuuchi, K.2
  • 30
    • 0021045079 scopus 로고
    • In vitro transposition of bacteriophage Mu: A biochemical approach to a novel replication reaction
    • Mizuuchi K (1983) In vitro transposition of bacteriophage Mu: A biochemical approach to a novel replication reaction. Cell 35:785-794.
    • (1983) Cell , vol.35 , pp. 785-794
    • Mizuuchi, K.1
  • 31
    • 0025911364 scopus 로고
    • Steady-state kinetic analysis of ATP hydrolysis by the B protein of bacteriophage Mu: Involvement of protein oligomerization in the ATPase cycle
    • Adzuma K, Mizuuchi K (1991) Steady-state kinetic analysis of ATP hydrolysis by the B protein of bacteriophage Mu: Involvement of protein oligomerization in the ATPase cycle. J Biol Chem 266:6159-6167.
    • (1991) J Biol Chem , vol.266 , pp. 6159-6167
    • Adzuma, K.1    Mizuuchi, K.2
  • 32
    • 0018849312 scopus 로고
    • A new gene of bacteriophage P22 which regulates synthesis of antirepressor
    • Susskind MM (1980) A new gene of bacteriophage P22 which regulates synthesis of antirepressor. J Mol Biol 138:685-713.
    • (1980) J Mol Biol , vol.138 , pp. 685-713
    • Susskind, M.M.1
  • 33
    • 0022413774 scopus 로고
    • The bacteriophage P22 Arc and Mnt repressors: Overproduction, purification, and properties
    • Vershon AK, Youderian P, Susskind MM, Sauer RT (1985) The bacteriophage P22 Arc and Mnt repressors: Overproduction, purification, and properties. J Biol Chem 260:12124-12129.
    • (1985) J Biol Chem , vol.260 , pp. 12124-12129
    • Vershon, A.K.1    Youderian, P.2    Susskind, M.M.3    Sauer, R.T.4
  • 34
    • 0029671279 scopus 로고    scopus 로고
    • Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA
    • Robinson CR, Sauer RT (1996) Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA. Biochemistry 35:109-116.
    • (1996) Biochemistry , vol.35 , pp. 109-116
    • Robinson, C.R.1    Sauer, R.T.2
  • 35
    • 0001607723 scopus 로고
    • Distantly related sequences in the α-and β-subunits of ATP synthase, myosin, kinases, and other ATP-requiring enzymes and a common nucleotide binding fold
    • Walker JE, Saraste M, Runswick MJ, Gay NJ (1982) Distantly related sequences in the α-and β-subunits of ATP synthase, myosin, kinases, and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J 1:945-951.
    • (1982) EMBO J , vol.1 , pp. 945-951
    • Walker, J.E.1    Saraste, M.2    Runswick, M.J.3    Gay, N.J.4
  • 36
    • 0026680746 scopus 로고
    • Mutational analysis of a DEAD box RNA helicase: The mammalian translation initiation factor eIF-4A
    • Pause A, Sonenberg N (1992) Mutational analysis of a DEAD box RNA helicase: The mammalian translation initiation factor eIF-4A. EMBO J 11:2643-2654.
    • (1992) EMBO J , vol.11 , pp. 2643-2654
    • Pause, A.1    Sonenberg, N.2
  • 37
    • 0037169531 scopus 로고    scopus 로고
    • DNA transposition of bacteriophage Mu: A quantitative analysis of target site selection in vitro
    • Haapa-Paananen S, Rita H, Savilahti H (2002) DNA transposition of bacteriophage Mu: A quantitative analysis of target site selection in vitro. J Biol Chem 277:2843-2851.
    • (2002) J Biol Chem , vol.277 , pp. 2843-2851
    • Haapa-Paananen, S.1    Rita, H.2    Savilahti, H.3
  • 38
    • 3042834099 scopus 로고    scopus 로고
    • Microarray analysis of transposition targets in Escherichia coli: The impact of transcription
    • Manna D, Breier AM, Higgins NP (2004) Microarray analysis of transposition targets in Escherichia coli: The impact of transcription. Proc Natl Acad Sci USA 101:9780-9785.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9780-9785
    • Manna, D.1    Breier, A.M.2    Higgins, N.P.3
  • 39
    • 0034816496 scopus 로고    scopus 로고
    • Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4p
    • Xie W, et al. (2001) Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4p. Mol Cell Biol 21:6606-6614.
    • (2001) Mol Cell Biol , vol.21 , pp. 6606-6614
    • Xie, W.1
  • 40
    • 0028936732 scopus 로고
    • Requirement of RNA polymerase III transcription factors for in vitro position-specific integration of a retrovirus-like element
    • Kirchner J, Connolly CM, Sandmeyer SB (1995) Requirement of RNA polymerase III transcription factors for in vitro position-specific integration of a retrovirus-like element. Science 267:1488-1491.
    • (1995) Science , vol.267 , pp. 1488-1491
    • Kirchner, J.1    Connolly, C.M.2    Sandmeyer, S.B.3
  • 41
    • 0242660940 scopus 로고    scopus 로고
    • Alternative interactions between the Tn7 transposase and the Tn7 target DNA-binding protein regulate target immunity and transposition
    • Skelding Z, Queen-Baker J, Craig NL (2003) Alternative interactions between the Tn7 transposase and the Tn7 target DNA-binding protein regulate target immunity and transposition. EMBO J 22:5904-5917.
    • (2003) EMBO J , vol.22 , pp. 5904-5917
    • Skelding, Z.1    Queen-Baker, J.2    Craig, N.L.3
  • 42
    • 0023957915 scopus 로고
    • Tn7 transposition: Two transposition pathways directed by five Tn7-encoded genes
    • Waddell CS, Craig NL (1988) Tn7 transposition: Two transposition pathways directed by five Tn7-encoded genes. Genes Dev 2:137-149.
    • (1988) Genes Dev , vol.2 , pp. 137-149
    • Waddell, C.S.1    Craig, N.L.2
  • 43
    • 0342803313 scopus 로고
    • Tn7 transposition: Recognition of the attTn7 target sequence
    • Waddell CS, Craig NL (1989) Tn7 transposition: Recognition of the attTn7 target sequence. Proc Natl Acad Sci USA 86:3958-3962.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 3958-3962
    • Waddell, C.S.1    Craig, N.L.2
  • 44
    • 0026093974 scopus 로고
    • DNase protection analysis of the stable synaptic complexes involved in Mu transposition
    • Mizuuchi M, Baker TA, Mizuuchi K (1991) DNase protection analysis of the stable synaptic complexes involved in Mu transposition. Proc Natl Acad Sci USA 88:9031-9035.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 9031-9035
    • Mizuuchi, M.1    Baker, T.A.2    Mizuuchi, K.3
  • 45
    • 0027203762 scopus 로고
    • Division of labor among monomers within the Mu transposase tetramer
    • Baker TA, Mizuuchi M, Savilahti H, Mizuuchi K (1993) Division of labor among monomers within the Mu transposase tetramer. Cell 74:723-733.
    • (1993) Cell , vol.74 , pp. 723-733
    • Baker, T.A.1    Mizuuchi, M.2    Savilahti, H.3    Mizuuchi, K.4


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