Reconstructing the phylogeny of African mitochondrial DNA lineages in Slavs

European Journal of Human Genetics

Volumn 16, Issue 9, 2008, Pages 1091-1096

  Malyarchuk, Boris A ^a   Derenko, Miroslava ^a   Perkova, Maria ^a   Grzybowski, Tomasz ^b   Vanecek, Tomas ^c   Lazur, Jan ^d  

^a INSTITUTE OF BIOLOGICAL PROBLEMS OF THE NORTH   (Russian Federation)

^b NICOLAUS COPERNICUS UNIVERSITY   (Poland)

^c CHARLES UNIVERSITY   (Czech Republic)

^d LABMED   (Slovakia)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

ARTICLE; CLADISTICS; CONTROLLED STUDY; CZECH REPUBLIC; EASTERN EUROPE; GENE FREQUENCY; GENE MUTATION; GENE POOL; GENE SEQUENCE; GENETIC VARIABILITY; GENOME ANALYSIS; GEOGRAPHIC ORIGIN; HUMAN; INTROGRESSION; MOLECULAR PHYLOGENY; NEGRO; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; PHYLOGEOGRAPHY; POLAND; POPULATION GENETICS; POPULATION MIGRATION; PREHISTORIC PERIOD; PRIORITY JOURNAL; RUSSIAN FEDERATION; SLOVAKIA;

AFRICA, WESTERN; AFRICAN CONTINENTAL ANCESTRY GROUP; DNA, MITOCHONDRIAL; EUROPE, EASTERN; GENE POOL; GENETICS, POPULATION; HAPLOTYPES; HUMANS; PHYLOGENY; VARIATION (GENETICS);

EID: 50149093054     PISSN: 10184813     EISSN: 14765438     Source Type: Journal    
DOI: 10.1038/ejhg.2008.70     Document Type: Article

References (42)

1. Salas A, Richards M, De la Fe T et al: The making of the African mtDNA landscape. Am J Hum Genet 2002; 71: 1082-1111.
2. Richards M, Rengo C, Cruciani F et al: Extensive female mediated gene flow from sub-Saharan Africa into Near Eastern Arab populations. Am J Hum Genet 2003; 72: 1058-1064.
3. Salas A, Richards M, Lareu M-V et al: The African diaspora: mitochondrial DNA and the Atlantic slave trade. Am J Hum Genet 2004; 74: 454-465.
4. Pereira L, Cunha C, Amorim A: Predicting sampling saturation of mtDNA haplotypes: An application to an enlarged Portuguese database. Int J Legal Med 2004; 118: 132-136.
5. Larruga JM, Diez F, Pinto FM, Flores C, Gonzalez AM: Mitochondrial DNA characterisation of European isolates: The Maragatos. from Spain. Eur J Hum Genet 2001; 9: 708-716.
6. Gonzalez AM, Brehm A, Perez JA, Maca-Meyer N, Flores C, Cabrera VM: Mitochondrial DNA affinities at the Atlantic fringe of Europe. Am J Phys Anthropol 2003; 120: 391-404.
7. Gnammankou, D: African Slave Trade in Russia. Paris: UNESCO, 1988.
8. Sajantila A, Lahermo P, Anttinen T et al: Genes and languages in Europe - an analysis of mitochondrial lineages. Genome Res 1995; 5: 42-52.
9. Bermisheva M, Tambets K, Villems R, Khusnutdinova E: Diversity of mitochondrial DNA haplogroups in ethnic populations of the Volga-Ural region. Mol Biol (Mosk) 2002; 36: 990-1001.
10. Pliss L, Tambets K, Loogvali E-L et al: Mitochondrial DNA portrait of Latvians: Towards the understanding of the genetic structure of Baltic-speaking populations. Ann Hum Genet 2006; 70: 439-458.
11. Malyarchuk BA, Derenko MV, Grzybowski T et al: Differentiation of mitochondrial DNA and Y chromosome in Russian populations. Hum Biol 2004; 76: 877-900.
12. Grzybowski T, Malyarchuk BA, Derenko MV, Perkova MA, Bednarek J, Wozniak M: Complex interactions of the Eastern and Western Slavic populations with other European groups as revealed by mitochondrial DNA analysis. Forensic Sci Int: Genetics 2007; 1: 141-147.
13. Malyarchuk BA, Grzybowski T, Derenko MV, Czarny J, Woniak M, Micicka-liwka D: Mitochondrial DNA variability in Poles and Russians. Ann Hum Genet 2002; 66: 261-283.
14. Malyarchuk BA, Grzybowski T, Derenko MV, Czarny J, Drobni K, Miscicka-Sliwka D: Mitochondrial DNA variability in Bosnians and Slovenians. Ann Hum Genet 2003; 67: 412-425.
15. Malyarchuk BA, Vanecek T, Perkova MA, Derenko MV, Sip M: Mitochondrial DNA variability in the Czech population, with application to the ethnic history of Slavs. Hum Biol 2006; 78: 681-696.
16. Malyarchuk BA, Perkova MA, Derenko MV, Vanecek T, Lazur J, Gomolcak P: Mitochondrial DNA variability in Slovaks, with application to the Roma origin. Ann Hum Genet 2008; 72: 228-240.
17. Richards MB, Macaulay VA, Hickey E et al: Tracing European founder lineages in the near eastern mtDNA pool. Am J Hum Genet 2000; 67: 1251-1276.
18. Malyarchuk BA, Czarny J: African DNA lineages in the mitochondrial gene pool of Europeans. Mol Biol (Mosk) 2005; 39: 703-709.
19. Casas MJ, Hagelberg E, Fregel R, Larruga JM, Gonzalez AM: Human mitochondrial DNA diversity in an archaeological site in al-Andalus: genetic impact of migrations from North Africa in medieval Spain. Am J Phys Anthropol 2006; 131: 539-551.
20. Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N: Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 1999; 23: 147.
21. Torroni A, Rengo C, Guida V et al: Do the four clades of the mtDNA haplogroup L2 evolve at different rates? Am J Hum Genet 2001; 69: 1348-1356.
22. Cerny V, Salas A, Hájek M, aloudková M, Brdicka R: A bidirectional corridor in the Sahel-Sudan belt and the distinctive features of the Chad Basin populations: A history revealed by the mitochondrial DNA genome. Ann Hum Genet 2007; 71: 433-452.
23. Hünemeier T, Carvalho C, Marrero AR, Salzano FM, Pena SDJ, Bortolini MC: Niger-Congo speaking populations and the formation of the Brazilian gene pool: MtDNA and Y-chromosome data. Am J Phys Anthropol 2007; 133: 854-867.
24. Ruiz-Pesini E, Lott MT, Procaccio V et al: An enhanced MITOMAP with a global mtDNA mutational phylogeny. Nucleic Acids Res 2007;.35 (Database issue): D823-D828.
25. Bandelt HJ, Forster P, Rohl A: Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 1999; 16: 37-48.
26. Forster P, Harding R, Torroni A, Bandelt HJ: Origin and evolution of Native American mtDNA variation: A reappraisal. Am J Hum Genet 1996; 59: 935-945.
27. Saillard J, Forster P, Lynnerup N, Bandelt H-J, Norby S: MtDNA variation among Greenland Eskimos: The edge of the Beringian expansion. Am J Hum Genet 2000; 67: 718-726.
28. Mishmar D, Ruiz-Pesini E, Golik P et al: Natural selection shaped regional mtDNA variation in humans. Proc Natl Acad Sci USA 2003; 100: 171-176.
29. Olivieri A, Achilli A, Pala M et al: The mtDNA legacy of the Levantine early upper Palaeolithic in Africa. Science 2006; 314 1767-1770.
30. Torroni A, Achilli A, Macaulay V, Richards M, Bandelt H-J: Harvesting the fruit of the human mtDNA tree. Trends Genet 2006; 22: 339-345.
31. Richard C, Pennarun E, Kivisild T et al: An mtDNA perspective of French genetic variation. Ann Hum Biol 2007; 34: 68-79.
32. Derenko M, Malyarchuk B, Grzybowski T et al: Phylogeographic analysis of mitochondrial DNA in northern Asian populations. Am J Hum Genet 2007; 81: 1025-1041.
33. Herrnstadt C, Elson JL, Fahy E, et al: Reduced median-network analysis of complete mitochondrial DNA coding-region sequences from the major African, Asian, and European haplo-groups. Am J Hum Genet 2002; 70: 1152-1171.
34. Plaza S, Calafell F, Helal A et al: Joining the pillars of Hercules: MtDNA sequences show multidirectional gene flow in the western Mediterranean. Ann Hum Genet 2003; 67: 312-328.
35. Francalacci P, Bertranpetit J, Calafell F, Underhill PA: Sequence diversity of the control region of mitochondrial DNA in Tuscany and its implications for the peopling of Europe. Am J Phys Anthropol 1996; 100: 443-460.
36. Kivisild T, Shen P, Wall DP et al: The role of selection in the evolution of human mitochondrial genomes. Genetics 2006; 172 373-387.
37. Gonzalez AM, Larruga JM, Abu-Amero KK, Shi Y, Pestano J, Cabrera VM: Mitochondrial lineage M1 traces an early human backflow to Africa. BMC Genomics 2007; 8: 223.
38. Alzualde A, Izagirre N, Alonso, S et al: Insights into the 'isolation' of the Basques: MtDNA lineages from the historical site of Aldaieta (6th-7th centuries AD). Am J Phys Anthropol 2006; 130 394-404.
39. Torroni A, Bandelt HJ, D'Urbano L et al: MtDNA analysis reveals a major late Paleolithic population expansion from southwestern to northeastern Europe. Am J Hum Genet 1998; 62: 1137-1152.
40. Achilli A, Rengo C, Battaglia V et al: Saami and Berbers - an unexpected mitochondrial DNA link. Am J Hum Genet 2005; 76: 883-886.
41. Gonzalez AM, Garcia O, Larruga JM, Cabrera VM: The mitochondrial lineage U8a reveals a Paleolithic settlement in the Basque country. BMC Genomics 2006; 7: 124.
42. Behar DM, Metspalu E, Kivisild T et al: The matrilineal ancestry of Ashkenazi Jewry: Portrait of a recent founder event. Am J Hum Genet 2006; 78: 487-497.