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Volumn 382, Issue 2, 2008, Pages 257-265

The Novel Protein Complex with SMARCAD1/KIAA1122 Binds to the Vicinity of TSS

Author keywords

ChIP chip; mass spectrometry; MSH2; SMARCAD1 KIAA1122; TRIM28

Indexed keywords

BINDING PROTEIN; PROTEIN KIAA1122; PROTEIN MSH2; PROTEIN SMARCAD 1; PROTEIN TRIM 28; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 50049132579     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2008.07.031     Document Type: Article
Times cited : (25)

References (38)
  • 1
    • 0035997356 scopus 로고    scopus 로고
    • ATP-dependent nucleosome remodeling
    • Becker P.B., and Horz W. ATP-dependent nucleosome remodeling. Annu. Rev. Biochem. 71 (2002) 247-273
    • (2002) Annu. Rev. Biochem. , vol.71 , pp. 247-273
    • Becker, P.B.1    Horz, W.2
  • 2
    • 0037380161 scopus 로고    scopus 로고
    • Recent advances in understanding chromatin remodeling by SWI/SNF complexes
    • Martens J.A., and Winston F. Recent advances in understanding chromatin remodeling by SWI/SNF complexes. Curr. Opin. Genet. Dev. 13 (2003) 136-142
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 136-142
    • Martens, J.A.1    Winston, F.2
  • 3
    • 0025726160 scopus 로고
    • Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation
    • Laurent B.C., Treitel M.A., and Carlson M. Functional interdependence of the yeast SNF2, SNF5, and SNF6 proteins in transcriptional activation. Proc. Natl Acad. Sci. USA 88 (1991) 2687-2691
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 2687-2691
    • Laurent, B.C.1    Treitel, M.A.2    Carlson, M.3
  • 4
    • 0027434083 scopus 로고
    • A human homologue of Saccharomyces cerevisiae SNF2/SWI2 and Drosophila brm genes potentiates transcriptional activation by the glucocorticoid receptor
    • Muchardt C., and Yaniv M. A human homologue of Saccharomyces cerevisiae SNF2/SWI2 and Drosophila brm genes potentiates transcriptional activation by the glucocorticoid receptor. EMBO J. 12 (1993) 4279-4290
    • (1993) EMBO J. , vol.12 , pp. 4279-4290
    • Muchardt, C.1    Yaniv, M.2
  • 5
    • 0027493251 scopus 로고
    • BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription
    • Khavari P.A., Peterson C.L., Tamkun J.W., Mendel D.B., and Crabtree G.R. BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription. Nature 366 (1993) 170-174
    • (1993) Nature , vol.366 , pp. 170-174
    • Khavari, P.A.1    Peterson, C.L.2    Tamkun, J.W.3    Mendel, D.B.4    Crabtree, G.R.5
  • 6
    • 0029157378 scopus 로고
    • Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions
    • Eisen J.A., Sweder K.S., and Hanawalt P.C. Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions. Nucleic Acids Res. 23 (1995) 2715-2723
    • (1995) Nucleic Acids Res. , vol.23 , pp. 2715-2723
    • Eisen, J.A.1    Sweder, K.S.2    Hanawalt, P.C.3
  • 7
    • 33745122231 scopus 로고    scopus 로고
    • Identification of multiple distinct Snf2 subfamilies with conserved structural motifs
    • Flaus A., Martin D.M., Barton G.J., and Owen-Hughes T. Identification of multiple distinct Snf2 subfamilies with conserved structural motifs. Nucleic Acids Res. 34 (2006) 2887-2905
    • (2006) Nucleic Acids Res. , vol.34 , pp. 2887-2905
    • Flaus, A.1    Martin, D.M.2    Barton, G.J.3    Owen-Hughes, T.4
  • 8
    • 0028093378 scopus 로고
    • Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex
    • Kwon H., Imbalzano A.N., Khavari P.A., Kingston R.E., and Green M.R. Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex. Nature 370 (1994) 477-481
    • (1994) Nature , vol.370 , pp. 477-481
    • Kwon, H.1    Imbalzano, A.N.2    Khavari, P.A.3    Kingston, R.E.4    Green, M.R.5
  • 9
    • 0029787059 scopus 로고    scopus 로고
    • Diversity and specialization of mammalian SWI/SNF complexes
    • Wang W., Xue Y., Zhou S., Kuo A., Cairns B.R., and Crabtree G.R. Diversity and specialization of mammalian SWI/SNF complexes. Genes Dev. 10 (1996) 2117-2130
    • (1996) Genes Dev. , vol.10 , pp. 2117-2130
    • Wang, W.1    Xue, Y.2    Zhou, S.3    Kuo, A.4    Cairns, B.R.5    Crabtree, G.R.6
  • 10
    • 35348984181 scopus 로고    scopus 로고
    • DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes
    • Rippe K., Schrader A., Riede P., Strohner R., Lehmann E., and Langst G. DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes. Proc. Natl Acad. Sci. USA 104 (2007) 15635-15640
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , pp. 15635-15640
    • Rippe, K.1    Schrader, A.2    Riede, P.3    Strohner, R.4    Lehmann, E.5    Langst, G.6
  • 12
    • 0027076562 scopus 로고
    • The mouse Enhancer trap locus 1 (Etl-1): a novel mammalian gene related to Drosophila and yeast transcriptional regulator genes
    • Soininen R., Schoor M., Henseling U., Tepe C., Kisters-Woike B., Rossant J., and Gossler A. The mouse Enhancer trap locus 1 (Etl-1): a novel mammalian gene related to Drosophila and yeast transcriptional regulator genes. Mech. Dev. 39 (1992) 111-123
    • (1992) Mech. Dev. , vol.39 , pp. 111-123
    • Soininen, R.1    Schoor, M.2    Henseling, U.3    Tepe, C.4    Kisters-Woike, B.5    Rossant, J.6    Gossler, A.7
  • 13
    • 0033166982 scopus 로고    scopus 로고
    • Skeletal dysplasias, growth retardation, reduced postnatal survival, and impaired fertility in mice lacking the SNF2/SWI2 family member ETL1
    • Schoor M., Schuster-Gossler K., Roopenian D., and Gossler A. Skeletal dysplasias, growth retardation, reduced postnatal survival, and impaired fertility in mice lacking the SNF2/SWI2 family member ETL1. Mech. Dev. 85 (1999) 73-83
    • (1999) Mech. Dev. , vol.85 , pp. 73-83
    • Schoor, M.1    Schuster-Gossler, K.2    Roopenian, D.3    Gossler, A.4
  • 14
    • 0027438752 scopus 로고
    • The Etl-1 gene encodes a nuclear protein differentially expressed during early mouse development
    • Schoor M., Schuster-Gossler K., and Gossler A. The Etl-1 gene encodes a nuclear protein differentially expressed during early mouse development. Dev. Dyn. 197 (1993) 227-237
    • (1993) Dev. Dyn. , vol.197 , pp. 227-237
    • Schoor, M.1    Schuster-Gossler, K.2    Gossler, A.3
  • 15
    • 0033615373 scopus 로고    scopus 로고
    • Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain
    • Hirosawa M., Nagase T., Ishikawa K., Kikuno R., Nomura N., and Ohara O. Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain. DNA Res. 6 (1999) 329-336
    • (1999) DNA Res. , vol.6 , pp. 329-336
    • Hirosawa, M.1    Nagase, T.2    Ishikawa, K.3    Kikuno, R.4    Nomura, N.5    Ohara, O.6
  • 16
    • 0034667350 scopus 로고    scopus 로고
    • SMARCAD1, a novel human helicase family-defining member associated with genetic instability: cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases
    • Adra C.N., Donato J.L., Badovinac R., Syed F., Kheraj R., Cai H., et al. SMARCAD1, a novel human helicase family-defining member associated with genetic instability: cloning, expression, and mapping to 4q22-q23, a band rich in breakpoints and deletion mutants involved in several human diseases. Genomics 69 (2000) 162-173
    • (2000) Genomics , vol.69 , pp. 162-173
    • Adra, C.N.1    Donato, J.L.2    Badovinac, R.3    Syed, F.4    Kheraj, R.5    Cai, H.6
  • 17
    • 34548813366 scopus 로고    scopus 로고
    • The chromatin remodeling protein, SRCAP, is critical for deposition of the histone variant H2A.Z at promoters
    • Wong M.M., Cox L.K., and Chrivia J.C. The chromatin remodeling protein, SRCAP, is critical for deposition of the histone variant H2A.Z at promoters. J. Biol. Chem. 282 (2007) 26132-26139
    • (2007) J. Biol. Chem. , vol.282 , pp. 26132-26139
    • Wong, M.M.1    Cox, L.K.2    Chrivia, J.C.3
  • 19
    • 34147101544 scopus 로고    scopus 로고
    • INO80 subfamily of chromatin remodeling complexes
    • Bao Y., and Shen X. INO80 subfamily of chromatin remodeling complexes. Mutat. Res. 618 (2007) 18-29
    • (2007) Mutat. Res. , vol.618 , pp. 18-29
    • Bao, Y.1    Shen, X.2
  • 20
    • 0035839104 scopus 로고    scopus 로고
    • The p400 complex is an essential E1A transformation target
    • Fuchs M., Gerber J., Drapkin R., Sif S., Ikura T., Ogryzko V., et al. The p400 complex is an essential E1A transformation target. Cell 106 (2001) 297-307
    • (2001) Cell , vol.106 , pp. 297-307
    • Fuchs, M.1    Gerber, J.2    Drapkin, R.3    Sif, S.4    Ikura, T.5    Ogryzko, V.6
  • 21
    • 0037398652 scopus 로고    scopus 로고
    • A SWI2/SNF2-type ATPase/helicase protein, mDomino, interacts with myeloid zinc finger protein 2A (MZF-2A) to regulate its transcriptional activity
    • Ogawa H., Ueda T., Aoyama T., Aronheim A., Nagata S., and Fukunaga R. A SWI2/SNF2-type ATPase/helicase protein, mDomino, interacts with myeloid zinc finger protein 2A (MZF-2A) to regulate its transcriptional activity. Genes Cells 8 (2003) 325-339
    • (2003) Genes Cells , vol.8 , pp. 325-339
    • Ogawa, H.1    Ueda, T.2    Aoyama, T.3    Aronheim, A.4    Nagata, S.5    Fukunaga, R.6
  • 22
    • 34147158728 scopus 로고    scopus 로고
    • The Chd family of chromatin remodelers
    • Marfella C.G., and Imbalzano A.N. The Chd family of chromatin remodelers. Mutat. Res. 618 (2007) 30-40
    • (2007) Mutat. Res. , vol.618 , pp. 30-40
    • Marfella, C.G.1    Imbalzano, A.N.2
  • 23
    • 34249790579 scopus 로고    scopus 로고
    • Insights on the functional role of chromatin remodelers in osteogenic cells
    • Benayahu D., Shacham N., and Shur I. Insights on the functional role of chromatin remodelers in osteogenic cells. Crit. Rev. Eukaryotic Gene Expression 17 (2007) 103-113
    • (2007) Crit. Rev. Eukaryotic Gene Expression , vol.17 , pp. 103-113
    • Benayahu, D.1    Shacham, N.2    Shur, I.3
  • 24
    • 44949144048 scopus 로고    scopus 로고
    • CHD8 is an ATP-dependent chromatin remodeling factor that regulates beta-catenin target genes
    • Thompson B.A., Tremblay V., Lin G., and Bochar D.A. CHD8 is an ATP-dependent chromatin remodeling factor that regulates beta-catenin target genes. Mol. Cell. Biol. 28 (2008) 3894-3904
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 3894-3904
    • Thompson, B.A.1    Tremblay, V.2    Lin, G.3    Bochar, D.A.4
  • 25
    • 34948902396 scopus 로고    scopus 로고
    • CHD proteins: a diverse family with strong ties
    • Hall J.A., and Georgel P.T. CHD proteins: a diverse family with strong ties. Biochem. Cell Biol. 85 (2007) 463-476
    • (2007) Biochem. Cell Biol. , vol.85 , pp. 463-476
    • Hall, J.A.1    Georgel, P.T.2
  • 26
    • 22544465243 scopus 로고    scopus 로고
    • Human SRCAP and Drosophila melanogaster DOM are homologs that function in the notch signaling pathway
    • Eissenberg J.C., Wong M., and Chrivia J.C. Human SRCAP and Drosophila melanogaster DOM are homologs that function in the notch signaling pathway. Mol. Cell. Biol. 25 (2005) 6559-6569
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 6559-6569
    • Eissenberg, J.C.1    Wong, M.2    Chrivia, J.C.3
  • 27
    • 19944401170 scopus 로고    scopus 로고
    • A comprehensive approach for establishment of the platform to analyze functions of KIAA proteins II: public release of inaugural version of InGaP database containing gene/protein expression profiles for 127 mouse KIAA genes/proteins
    • Koga H., Yuasa S., Nagase T., Shimada K., Nagano M., Imai K., et al. A comprehensive approach for establishment of the platform to analyze functions of KIAA proteins II: public release of inaugural version of InGaP database containing gene/protein expression profiles for 127 mouse KIAA genes/proteins. DNA Res. 11 (2004) 293-304
    • (2004) DNA Res. , vol.11 , pp. 293-304
    • Koga, H.1    Yuasa, S.2    Nagase, T.3    Shimada, K.4    Nagano, M.5    Imai, K.6
  • 28
    • 0032757952 scopus 로고    scopus 로고
    • Cellular and subcellular localization of a newly identified member of the protein 4.1 family, brain 4.1, in the cerebellum of adult and postnatally developing rats
    • Ohara R., Yamakawa H., Nakayama M., Yuasa S., and Ohara O. Cellular and subcellular localization of a newly identified member of the protein 4.1 family, brain 4.1, in the cerebellum of adult and postnatally developing rats. Brain Res. Dev. Brain Res. 117 (1999) 127-138
    • (1999) Brain Res. Dev. Brain Res. , vol.117 , pp. 127-138
    • Ohara, R.1    Yamakawa, H.2    Nakayama, M.3    Yuasa, S.4    Ohara, O.5
  • 29
    • 0347752389 scopus 로고    scopus 로고
    • The Kazusa cDNA project for identification of unknown human transcripts
    • Nagase T., Kikuno R., and Ohara O. The Kazusa cDNA project for identification of unknown human transcripts. C. R. Biol. 326 (2003) 959-966
    • (2003) C. R. Biol. , vol.326 , pp. 959-966
    • Nagase, T.1    Kikuno, R.2    Ohara, O.3
  • 30
    • 33846010529 scopus 로고    scopus 로고
    • An integrated map of p53-binding sites and histone modification in the human ENCODE regions
    • Kaneshiro K., Tsutsumi S., Tsuji S., Shirahige K., and Aburatani H. An integrated map of p53-binding sites and histone modification in the human ENCODE regions. Genomics 89 (2007) 178-188
    • (2007) Genomics , vol.89 , pp. 178-188
    • Kaneshiro, K.1    Tsutsumi, S.2    Tsuji, S.3    Shirahige, K.4    Aburatani, H.5
  • 31
    • 33745199392 scopus 로고    scopus 로고
    • Genomic approach for the understanding of dynamic aspect of chromosome behavior
    • Katou Y., Kaneshiro K., Aburatani H., and Shirahige K. Genomic approach for the understanding of dynamic aspect of chromosome behavior. Methods Enzymol. 409 (2006) 389-410
    • (2006) Methods Enzymol. , vol.409 , pp. 389-410
    • Katou, Y.1    Kaneshiro, K.2    Aburatani, H.3    Shirahige, K.4
  • 32
  • 33
    • 30344478870 scopus 로고    scopus 로고
    • A global map of p53 transcription-factor binding sites in the human genome
    • Wei C.L., Wu Q., Vega V.B., Chiu K.P., Ng P., Zhang T., et al. A global map of p53 transcription-factor binding sites in the human genome. Cell 124 (2006) 207-219
    • (2006) Cell , vol.124 , pp. 207-219
    • Wei, C.L.1    Wu, Q.2    Vega, V.B.3    Chiu, K.P.4    Ng, P.5    Zhang, T.6
  • 34
    • 22044456306 scopus 로고    scopus 로고
    • The DNA mismatch repair gene hMSH2 is a potent coactivator of oestrogen receptor alpha
    • Wada-Hiraike O., Yano T., Nei T., Matsumoto Y., Nagasaka K., Takizawa S., et al. The DNA mismatch repair gene hMSH2 is a potent coactivator of oestrogen receptor alpha. Br. J. Cancer 92 (2005) 2286-2291
    • (2005) Br. J. Cancer , vol.92 , pp. 2286-2291
    • Wada-Hiraike, O.1    Yano, T.2    Nei, T.3    Matsumoto, Y.4    Nagasaka, K.5    Takizawa, S.6
  • 35
    • 35449006644 scopus 로고    scopus 로고
    • MAGE-A, mMage-b, and MAGE-C proteins form complexes with KAP1 and suppress p53-dependent apoptosis in MAGE-positive cell lines
    • Yang B., O'Herrin S.M., Wu J., Reagan-Shaw S., Ma Y., Bhat K.M., et al. MAGE-A, mMage-b, and MAGE-C proteins form complexes with KAP1 and suppress p53-dependent apoptosis in MAGE-positive cell lines. Cancer Res. 67 (2007) 9954-9962
    • (2007) Cancer Res. , vol.67 , pp. 9954-9962
    • Yang, B.1    O'Herrin, S.M.2    Wu, J.3    Reagan-Shaw, S.4    Ma, Y.5    Bhat, K.M.6
  • 36
    • 33750373155 scopus 로고    scopus 로고
    • KAP1 dictates p53 response induced by chemotherapeutic agents via Mdm2 interaction
    • Okamoto K., Kitabayashi I., and Taya Y. KAP1 dictates p53 response induced by chemotherapeutic agents via Mdm2 interaction. Biochem. Biophys. Res. Commun. 351 (2006) 216-222
    • (2006) Biochem. Biophys. Res. Commun. , vol.351 , pp. 216-222
    • Okamoto, K.1    Kitabayashi, I.2    Taya, Y.3


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