Comparison of maize similarity and dissimilarity genetic coefficients based on microsatellite markers

Genetics and Molecular Research

Volumn 7, Issue 3, 2008, Pages 695-705

  Balestre, M ^a   Von Pinho, R G ^a   Souza, J C ^a   Lima, J L ^a  

^a FEDERAL UNIVERSITY OF LAVRAS   (Brazil)

Author keywords

Cluster analysis; Genetic divergence; Heterotic groups

Indexed keywords

ARTICLE; GENETIC DISTANCE; GENETIC SIMILARITY; GENOTYPE; INBRED STRAIN; MAIZE; PHYLOGENETIC TREE; SIMPLE SEQUENCE REPEAT;

ZEA MAYS;

EID: 49749127285     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/vol7-3gmr458     Document Type: Article

References (19)

1. Amorim EP, Amorim VBO, dos Santos JB, Pereira deSouza A, et al. (2006). Genetic distance based on SSR and grain yield of inter- and intrapopulational maize single cross hybrids. Maydica 51: 507-513.
2. Cruz CD (1997). Programa Genes: aplicativo computacional em genética e estatística. Universidade Federal de Viçosa, Viçosa.
3. Dias LA, Picoli EA, Rocha RB and Alfenas AC (2004). A priori choice of hybrid parents in plants. Genet. Mol. Res. 3: 356-368.
4. Duarte JM, dos Santos JB and Melo LC (1999). Comparison of similarity coefficients based on RAPD markers in the common bean. Genet. Mol. Biol. 22: 427-432.
5. Emygdio BM, Antunes IF, Choer E and Nedel JL (2003). Eficiência de coeficientes de similaridade em genótipos de feijão mediante marcadores RAPD. Pesq. Agropec. Bras. 38: 243-250.
6. Guimarães PS, Paterniani MEAGZ, Lüders RR, Souza AP, et al. (2007). Correlation between the heterosis of maize hybrids and genetic divergence among lines. Pesq. Agropec. Bras. 42: 811-816.
7. Iemma M (2003). Use of best linear unbiased prediction in diallel analysis and in prediction of single crosses. Doctoral thesis, Escola Superior de Agricultura Luiz de Queiroz (ESALQ), Piracicaba.
8. Jackson AA, Somers KM and Harvey HH (1989). Similarity coefficients: measures for co-occurrence and association or simply measures of occurrence? Am. Nat. 133: 436-453.
9. Johns MA, Skroch PW, Nienhuis J, Kinrichsen P, et al. (1997). Gene pool classification of common bean landraces from Chile based on RAPD and morphological data. Crop Sci. 37: 605-613.
10. Johnson RA and Wichern DW (1998). Applied Multivariate Statistical Analysis. Prentice-Hall, New Jersey.
11. Kruskal JB (1964). Multidimensional scaling by optimizing goodness of fit to a non-metric hypothesis. Psychometrika 29: 1-27.
12. Melchinger AE (1999). Genetic diversity and heterosis. In: The Genetics and Exploitation of heterosis in Crops (Coors JG and Pandey S, eds.). CCSA, ASA, and SSA, Madison.
13. Meyer AS, Garcia AAF, Souza AP and Souza CL Jr (2004). Comparison of similarity coefficients used for cluster analysis with dominant markers in maize (Zea mays L). Genet. Mol. Biol. 27: 83-91.
14. Reif JC, Melchinger AE, Xia XC, Warburton ML, et al. (2003). Genetic distance based on simple sequence repeats and heterosis in tropical maize populations. Crop Sci. 43: 1275-1282.
15. Reif JC, Melchinger AE and Frisch M (2005). Genetical and mathematical properties of similarity and dissimilarity coefficients applied in plant breeding and seed bank management. Crop Sci. 41: 1-7.
16. Rocha BHG, Augustin E, da Silva JB and Viegas J (2001). Isoenzymatic variability in wild potatoes. Pesq. Agropec. Bras. 36: 781-791.
17. Rohlf FJ (2000). NTSYSpc numerical taxonomy and multivariate analysis system. Version 2.1. Exeter Software, Setauket.
18. Saghai-Maroof MA, Soliman KM, Jorgensen RA and Allard RW (1984). Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc. Natl. Acad. Sci. U. S. A. 81: 8014-8018.
19. SAS Institute (2000). SAS language and procedures: Usage. Version 8.1. SAS Institute, CD-ROM, Cary.