-
1
-
-
8844283351
-
Which is better for cDNA-microarray-based classification: Ratios or direct intensities
-
Attoor,S. et al. (2004) Which is better for cDNA-microarray-based classification: Ratios or direct intensities. Bioinformatics, 20, 2513-2520.
-
(2004)
Bioinformatics
, vol.20
, pp. 2513-2520
-
-
Attoor, S.1
-
2
-
-
0036629509
-
Simulation of cDNA microarrays via a parameterized random signal model
-
Balagurunathan,Y. et al. (2002) Simulation of cDNA microarrays via a parameterized random signal model. J. Biomed. Opt., 7, 507-523.
-
(2002)
J. Biomed. Opt
, vol.7
, pp. 507-523
-
-
Balagurunathan, Y.1
-
3
-
-
33845981513
-
aCGH local copy number aberrations associated with overall copy number genomic instability in colorectal cancer: Coordinate involvement of the regions including BCR and ABL
-
Bartos,J.D. et al. (2007) aCGH local copy number aberrations associated with overall copy number genomic instability in colorectal cancer: Coordinate involvement of the regions including BCR and ABL. Mutat. Res., 615, 1-11.
-
(2007)
Mutat. Res
, vol.615
, pp. 1-11
-
-
Bartos, J.D.1
-
4
-
-
16344388209
-
Detection of low level genomic alterations by comparative genomic hybridization based on cDNA micro-arrays
-
Bilke,S. et al. (2005) Detection of low level genomic alterations by comparative genomic hybridization based on cDNA micro-arrays. Bioinformatics, 21, 1138-1145.
-
(2005)
Bioinformatics
, vol.21
, pp. 1138-1145
-
-
Bilke, S.1
-
5
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on bias and variance
-
Bolstad,B. et al. (2003) A comparison of normalization methods for high density oligonucleotide array data based on bias and variance. Bioinformatics, 19, 185-193.
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.1
-
6
-
-
33645769276
-
High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients
-
Carrasco,D.R. et al. (2006) High-resolution genomic profiles define distinct clinico-pathogenetic subgroups of multiple myeloma patients. Cancer Cell, 9, 313-325.
-
(2006)
Cancer Cell
, vol.9
, pp. 313-325
-
-
Carrasco, D.R.1
-
7
-
-
33845191779
-
Genomic and transcriptional aberrations linked to breast cancer pathophysiologies
-
Chin,K. et al. (2006) Genomic and transcriptional aberrations linked to breast cancer pathophysiologies. Cancer Cell, 10, 529-541.
-
(2006)
Cancer Cell
, vol.10
, pp. 529-541
-
-
Chin, K.1
-
8
-
-
0031226737
-
Selection of invasive and metastatic subpopulations from a human lung adenocarcinoma cell line
-
Chu,Y.W. et al. (1997) Selection of invasive and metastatic subpopulations from a human lung adenocarcinoma cell line. Am. J. Respir. Cell Mol. Biol., 17, 353-360.
-
(1997)
Am. J. Respir. Cell Mol. Biol
, vol.17
, pp. 353-360
-
-
Chu, Y.W.1
-
9
-
-
0002629270
-
Maximum likelihood from incomplete data via the EM algorithm
-
Dempster,A.P. et al. (1977) Maximum likelihood from incomplete data via the EM algorithm. J. R. Stat. Soc. B, 39, 1-38.
-
(1977)
J. R. Stat. Soc. B
, vol.39
, pp. 1-38
-
-
Dempster, A.P.1
-
13
-
-
0036841790
-
Up-regulated caveolin-1 accentuates the metastasis capability of lung adenocarcinoma by inducing filopodia formation
-
Ho,C.-C. et al. (2002) Up-regulated caveolin-1 accentuates the metastasis capability of lung adenocarcinoma by inducing filopodia formation. Am. J. Pathol. 161, 1647-1656.
-
(2002)
Am. J. Pathol
, vol.161
, pp. 1647-1656
-
-
Ho, C.-C.1
-
14
-
-
33748921022
-
Genetic inactivation of the APC gene contributes to the malignant progression of sporadic hepatocellular carcinoma: A case report
-
Katoh,H. et al. (2006) Genetic inactivation of the APC gene contributes to the malignant progression of sporadic hepatocellular carcinoma: A case report. Genes Chromosomes Cancer, 45, 1050-1057.
-
(2006)
Genes Chromosomes Cancer
, vol.45
, pp. 1050-1057
-
-
Katoh, H.1
-
15
-
-
28344444255
-
A stepwise framework for the normalization of array CGH data
-
Khojasteh,M. et al. (2005) A stepwise framework for the normalization of array CGH data. BMC Bioinformatics, 6, 274.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 274
-
-
Khojasteh, M.1
-
16
-
-
27544483495
-
Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data
-
Lai,W.R. et al. (2005) Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data. Bioinformatics, 21, 3763-3770.
-
(2005)
Bioinformatics
, vol.21
, pp. 3763-3770
-
-
Lai, W.R.1
-
17
-
-
0032542364
-
Genetic instabilities in human cancers
-
Lengauer,C. et al. (1998) Genetic instabilities in human cancers. Nature, 396, 643-649.
-
(1998)
Nature
, vol.396
, pp. 643-649
-
-
Lengauer, C.1
-
19
-
-
33646163019
-
BioHMM: A heterogeneous hidden Markov model for segmentmg array CGH data
-
Marioni,J.C. et al. (2006) BioHMM: A heterogeneous hidden Markov model for segmentmg array CGH data. Bioinformatics, 22, 1144-1146.
-
(2006)
Bioinformatics
, vol.22
, pp. 1144-1146
-
-
Marioni, J.C.1
-
20
-
-
33847105471
-
Spatial normalization of array-CGH data
-
Neuvial,P. et al. (2006) Spatial normalization of array-CGH data. BMC Bioinformatics, 7, 264.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 264
-
-
Neuvial, P.1
-
21
-
-
33845209913
-
A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes
-
Neve,R.M. et al. (2006) A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes. Cancer Cell 10, 515-527.
-
(2006)
Cancer Cell
, vol.10
, pp. 515-527
-
-
Neve, R.M.1
-
22
-
-
34548414218
-
A segmentation/clustering model for the analysis of array CGH data
-
Picard,F. et al. (2007) A segmentation/clustering model for the analysis of array CGH data. Biometrics, 63, 758-766.
-
(2007)
Biometrics
, vol.63
, pp. 758-766
-
-
Picard, F.1
-
23
-
-
17344371740
-
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
-
Pinkel,D. et al. (1998) High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat. Genet., 20, 207-211.
-
(1998)
Nat. Genet
, vol.20
, pp. 207-211
-
-
Pinkel, D.1
-
24
-
-
0032823523
-
Genome-wide analysis of DNA copy-number changes using cDNA microarrays
-
Pollack,J.R. et al. (1999) Genome-wide analysis of DNA copy-number changes using cDNA microarrays. Nat. Genet., 23, 41-46.
-
(1999)
Nat. Genet
, vol.23
, pp. 41-46
-
-
Pollack, J.R.1
-
25
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush,J. (2002) Microarray data normalization and transformation. Nature Genetics, 32, 496-501.
-
(2002)
Nature Genetics
, vol.32
, pp. 496-501
-
-
Quackenbush, J.1
-
26
-
-
0024610919
-
A tutorial on hidden Markov models and selected applications in speech recognition
-
Rabiner,L.R. (1989) A tutorial on hidden Markov models and selected applications in speech recognition. Proc. IEEE, 77, 257-286.
-
(1989)
Proc. IEEE
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
27
-
-
0038214755
-
Multicolor spectral karyotyping of human chromosomes
-
Schröck,E. et al. (1996) Multicolor spectral karyotyping of human chromosomes. Science, 273, 494-497.
-
(1996)
Science
, vol.273
, pp. 494-497
-
-
Schröck, E.1
-
28
-
-
33747890138
-
Integrating copy numbers polymorphisms into array CGH analysis using a robust HMM
-
Shah,S.P. et al. (2006) Integrating copy numbers polymorphisms into array CGH analysis using a robust HMM. Bioinformatics, 22 c431-c439.
-
(2006)
Bioinformatics
, vol.22
-
-
Shah, S.P.1
-
29
-
-
38049161350
-
Normalization of array-CGH data: Influence of copy number imbalances
-
Staaf,J. et al. (2007) Normalization of array-CGH data: Influence of copy number imbalances. BMC Genomics, 8, 382.
-
(2007)
BMC Genomics
, vol.8
, pp. 382
-
-
Staaf, J.1
-
30
-
-
34248523183
-
CGHcall: Calling aberrations for array CGH tumor profiles
-
van de Wiel,M.A. et al. (2007) CGHcall: Calling aberrations for array CGH tumor profiles. Bioinformatics, 23, 892-894.
-
(2007)
Bioinformatics
, vol.23
, pp. 892-894
-
-
van de Wiel, M.A.1
-
31
-
-
34147104969
-
A faster circular binary segmentation algorithm for the analysis of array CGH data
-
Venkatraman,E.S. and Olshen,A.B. (2007) A faster circular binary segmentation algorithm for the analysis of array CGH data. Bioinformatics, 23, 657-663.
-
(2007)
Bioinformatics
, vol.23
, pp. 657-663
-
-
Venkatraman, E.S.1
Olshen, A.B.2
-
32
-
-
0003916438
-
-
Chapman & Hall, London, UK
-
Wand,M.P. and Jones,M.C. (1995) Kernel Smoothing, Monographs on Statistics and Applied Probability. Chapman & Hall, London, UK.
-
(1995)
Kernel Smoothing, Monographs on Statistics and Applied Probability
-
-
Wand, M.P.1
Jones, M.C.2
-
33
-
-
27944455289
-
A comparison study: Applying segmentation to array CGH data for downstream analyses
-
Willenbrock,H. and Fridlyand,J. (2005) A comparison study: Applying segmentation to array CGH data for downstream analyses. Bioinformatics, 21, 4084-4091.
-
(2005)
Bioinformatics
, vol.21
, pp. 4084-4091
-
-
Willenbrock, H.1
Fridlyand, J.2
-
34
-
-
17744401429
-
Centralization: A new method for the normalization of gene. expression data
-
Zien,A. et al. (2001) Centralization: A new method for the normalization of gene. expression data. Bioinformatics, 17, 323-331.
-
(2001)
Bioinformatics
, vol.17
, pp. 323-331
-
-
Zien, A.1
|