Determination of ligand-binding sites on proteins using long-range hydrophobic potential

Biological and Pharmaceutical Bulletin

Volumn 31, Issue 8, 2008, Pages 1552-1558

  Yamaotsu, Noriyuki ^a   Oda, Akifumi ^b,c   Hirono, Shuichi ^a  

^a KITASATO UNIVERSITY   (Japan)

^b TOYAMA CHEMICAL CO LTD   (Japan)

^c TOHOKU PHARMACEUTICAL UNIVERSITY   (Japan)

Author keywords

Binding pocket; Binding site; Hydrophobic interaction; Hydrophobicity; Ligand; Structure based drug design

Indexed keywords

4 HYDROXYBENZOATE 3 MONOOXYGENASE; ALCOHOL DEHYDROGENASE; AMIDE; CAMPHOR 5 MONOOXYGENASE; CARBOHYDRATE BINDING PROTEIN; CARBOXYPEPTIDASE A; CATHEPSIN D; CETRIMIDE; DIHYDRODIPICOLINATE REDUCTASE; ENDTHIAPEPSIN; ENOLASE; FATTY ACID BINDING PROTEIN; GALACTOSE; GLUCAN 1,4 ALPHA GLUCOSIDASE; GLUTAMATE AMMONIA LIGASE; MYOGLOBIN; PENICILLOPEPSIN; PROTEIN; PROTEINASE; PURINE NUCLEOSIDE PHOSPHORYLASE; RETINOL BINDING PROTEIN; SIALIDASE; THERMOLYSIN; THROMBIN; TRIOSEPHOSPHATE ISOMERASE; TRYPSIN; XYLOSE ISOMERASE;

ARTICLE; BINDING SITE; DRUG DESIGN; HYDROPHOBICITY; INFLUENZA VIRUS; LIGAND BINDING; LIPOPHILICITY; MATHEMATICAL MODEL; PROTEIN STRUCTURE; VIRUS MUTATION;

BINDING SITES; CHEMISTRY, PHYSICAL; COMPUTER SIMULATION; LIGANDS; MOLECULAR CONFORMATION; PROTEIN BINDING; PROTEINS; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 48849107165     PISSN: 09186158     EISSN: 13475215     Source Type: Journal    
DOI: 10.1248/bpb.31.1552     Document Type: Article

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