메뉴 건너뛰기




Volumn 73, Issue 8, 2008, Pages 693-701

Statistical mixture modeling for cell subtype identification in flow cytometry

Author keywords

Automation; Bayesian analysis; Gating; Identification; Markov chain Monte Carlo; Mixture models; Statistics

Indexed keywords

ANTIBODY; CD19 ANTIBODY; CD3 ANTIBODY; CD4 ANTIBODY; CD8 ANTIBODY; CELL MARKER; FLUORESCEIN ISOTHIOCYANATE;

EID: 48849105886     PISSN: 15524922     EISSN: 15524930     Source Type: Journal    
DOI: 10.1002/cyto.a.20583     Document Type: Article
Times cited : (94)

References (24)
  • 1
  • 2
    • 26444448037 scopus 로고    scopus 로고
    • Maecker HT, Rinfret A, D'souza P, Darden J, Roig E, Landry C, Hayes P, Birungi J, Anzala O, Garcia M, Harari A, Frank I, Baydo R, Baker M, Holbrook J, Ottinger J, Lamoreaux L, Epling CL, Sinclair E, Suni MA, Punt K, Calarota S, El-Bahi S, Alter G, Maila H, Kuta E, Cox J, Gray C, Altfeld M, Nougarede N, Boyer J, Tussey L, Tobery T, Bredt B, Roederer M, Koup R, Maino VC, Weinhold K, Pantaleo G, Gilmour J, Horton H, Sekaly RP. Standardization of cytokine flow cytometry assays. BMC Immunol 2005;6:13.
    • Maecker HT, Rinfret A, D'souza P, Darden J, Roig E, Landry C, Hayes P, Birungi J, Anzala O, Garcia M, Harari A, Frank I, Baydo R, Baker M, Holbrook J, Ottinger J, Lamoreaux L, Epling CL, Sinclair E, Suni MA, Punt K, Calarota S, El-Bahi S, Alter G, Maila H, Kuta E, Cox J, Gray C, Altfeld M, Nougarede N, Boyer J, Tussey L, Tobery T, Bredt B, Roederer M, Koup R, Maino VC, Weinhold K, Pantaleo G, Gilmour J, Horton H, Sekaly RP. Standardization of cytokine flow cytometry assays. BMC Immunol 2005;6:13.
  • 3
    • 35348978336 scopus 로고    scopus 로고
    • A focus on automated recognition
    • Tarnok A. A focus on automated recognition. Cytometry Part A 2007;71A:769-770.
    • (2007) Cytometry Part A , vol.71 A , pp. 769-770
    • Tarnok, A.1
  • 4
    • 0000599677 scopus 로고    scopus 로고
    • Mixtures of distributions: Inference and estimation
    • Gilks WR, Richardson S, Spiegelhalter DJ, editors, London: Chapman & Hall/CRC;
    • Robert CP. Mixtures of distributions: Inference and estimation. In: Gilks WR, Richardson S, Spiegelhalter DJ, editors. Markov Chain Monte Carlo in Practice. London: Chapman & Hall/CRC; 1996. pp 441-464.
    • (1996) Markov Chain Monte Carlo in Practice , pp. 441-464
    • Robert, C.P.1
  • 6
    • 0003049326 scopus 로고
    • Modelling with mixtures (with discussion)
    • Bernardo JM, Berger JO, Dawid AP, Smith AFM, editors, Oxford: Oxford University Press;
    • West M. Modelling with mixtures (with discussion). In: Bernardo JM, Berger JO, Dawid AP, Smith AFM, editors. Bayesian Statistics 4. Oxford: Oxford University Press; 1992. pp 503-524.
    • (1992) Bayesian Statistics , vol.4 , pp. 503-524
    • West, M.1
  • 7
    • 84950937290 scopus 로고
    • Bayesian density estimation and inference using mixtures
    • Escobar MD, West M. Bayesian density estimation and inference using mixtures. J Am Stat Assoc 1995;90:577-588.
    • (1995) J Am Stat Assoc , vol.90 , pp. 577-588
    • Escobar, M.D.1    West, M.2
  • 8
    • 0027263996 scopus 로고
    • Statistical analysis of mixtures applied to postsynaptic potential fluctuations
    • Turner DA, West M. Statistical analysis of mixtures applied to postsynaptic potential fluctuations. J Neurosci Methods 1993;47:1-23.
    • (1993) J Neurosci Methods , vol.47 , pp. 1-23
    • Turner, D.A.1    West, M.2
  • 9
    • 0031497384 scopus 로고    scopus 로고
    • Hierarchical mixture models in neurological transmission analysis
    • West M. Hierarchical mixture models in neurological transmission analysis. J Am Stat Assoc 1997;92:587-606.
    • (1997) J Am Stat Assoc , vol.92 , pp. 587-606
    • West, M.1
  • 10
    • 0030938810 scopus 로고    scopus 로고
    • Heterogeneity between non-NMDA synaptic sites in paired-pulse plasticity of CA1 pyramidal neurons in the hippocampus
    • Turner DA, Chen Y, Isaac J, West M, Wheal HV. Heterogeneity between non-NMDA synaptic sites in paired-pulse plasticity of CA1 pyramidal neurons in the hippocampus. J Physiol 1997;500:441-461.
    • (1997) J Physiol , vol.500 , pp. 441-461
    • Turner, D.A.1    Chen, Y.2    Isaac, J.3    West, M.4    Wheal, H.V.5
  • 11
    • 84988091828 scopus 로고
    • A Bayesian method for classification and discrimination
    • Lavine M, West M. A Bayesian method for classification and discrimination. Can J Stat 1992;20:451-461.
    • (1992) Can J Stat , vol.20 , pp. 451-461
    • Lavine, M.1    West, M.2
  • 14
    • 0000238336 scopus 로고
    • A simplex method for function minimization
    • Nelder JA, Mead R. A simplex method for function minimization. Comput J 1964;7:308-313.
    • (1964) Comput J , vol.7 , pp. 308-313
    • Nelder, J.A.1    Mead, R.2
  • 15
    • 0030539336 scopus 로고    scopus 로고
    • Markov Chain Monte Carlo convergence diagnostics: A comparative review
    • Cowles MK, Carlin BP. Markov Chain Monte Carlo convergence diagnostics: A comparative review. J Am Stat Assoc 1996;91:883-904.
    • (1996) J Am Stat Assoc , vol.91 , pp. 883-904
    • Cowles, M.K.1    Carlin, B.P.2
  • 16
    • 0000120766 scopus 로고
    • Estimating the dimension of a model
    • Schwarz G. Estimating the dimension of a model. Ann Stat 1978;6:461-464.
    • (1978) Ann Stat , vol.6 , pp. 461-464
    • Schwarz, G.1
  • 17
    • 84950453304 scopus 로고
    • Sampling-based approaches to calculating marginal densities
    • Gelfand AE, Smith AFM. Sampling-based approaches to calculating marginal densities. J Am Stat Assoc 1990;85:398-409.
    • (1990) J Am Stat Assoc , vol.85 , pp. 398-409
    • Gelfand, A.E.1    Smith, A.F.M.2
  • 18
    • 14644444573 scopus 로고    scopus 로고
    • Bagwell CB. Hyperlog-a flexible log-like transform for negative, zero, and positive valued data. Cytometry Part A 2005;64A:34-42.
    • Bagwell CB. Hyperlog-a flexible log-like transform for negative, zero, and positive valued data. Cytometry Part A 2005;64A:34-42.
  • 19
    • 85047699080 scopus 로고    scopus 로고
    • A new "Logicle" display method avoids deceptive effects of logarithmic scaling for low signals and compensated data
    • Parks DR, Roederer M, Moore WA. A new "Logicle" display method avoids deceptive effects of logarithmic scaling for low signals and compensated data. Cytometry Part A 2006;69A:541-551.
    • (2006) Cytometry Part A , vol.69 A , pp. 541-551
    • Parks, D.R.1    Roederer, M.2    Moore, W.A.3
  • 20
    • 0035531242 scopus 로고    scopus 로고
    • Modelling heterogeneity with and without the Dirichlet process
    • Green PJ, Richardson S. Modelling heterogeneity with and without the Dirichlet process. Scand J Stat 2000;28:355-375.
    • (2000) Scand J Stat , vol.28 , pp. 355-375
    • Green, P.J.1    Richardson, S.2
  • 21
    • 18244378520 scopus 로고    scopus 로고
    • On Bayesian analysis of mixtures with an unknown number of components
    • Richardson S, Green PJ. On Bayesian analysis of mixtures with an unknown number of components. J R Stat Soc Ser B 1997;59:731-792.
    • (1997) J R Stat Soc Ser B , vol.59 , pp. 731-792
    • Richardson, S.1    Green, P.J.2
  • 22
    • 0034374610 scopus 로고    scopus 로고
    • Bayesian analysis of mixture models with an unknown number of components - An alternative to reversible jump methods
    • Stephens M. Bayesian analysis of mixture models with an unknown number of components - An alternative to reversible jump methods. Ann Stat 2000;28:40-74.
    • (2000) Ann Stat , vol.28 , pp. 40-74
    • Stephens, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.