Enhanced FRET contrast in lifetime imaging

Cytometry Part A

Volumn 73, Issue 8, 2008, Pages 745-753

  Spriet, Corentin ^a,c   Trinel, Dave ^a   Riquet, Franck ^a   Vandenbunder, Bernard ^a   Usson, Yves ^b   Heliot, Laurent ^a,d  

^a UNIV LILLE   (France)

^b UNIV GRENOBLE ALPES   (France)

^c GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

^d CNRS   (France)

Author keywords

Curve fitting; FLIM; FRET; Lifetime; Living cells; Model choice; Protein protein interactions; TCSPC

Indexed keywords

ALGORITHM; ARTICLE; EXPERIMENTAL MODEL; FLUORESCENCE LIFETIME IMAGING MICROSCOPY; FLUORESCENCE RESONANCE ENERGY TRANSFER; HUMAN; HUMAN CELL; IMAGE CYTOMETRY; IMAGING; MATHEMATICAL ANALYSIS; MOLECULAR INTERACTION; MONTE CARLO METHOD; PHOTON; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; SIMULATION; VALIDATION PROCESS;

ALGORITHMS; CELL SURVIVAL; FLUORESCENCE RESONANCE ENERGY TRANSFER; HELA CELLS; HUMANS; IMAGING, THREE-DIMENSIONAL; MODELS, BIOLOGICAL; NOCODAZOLE; PHOTONS; RAB GTP-BINDING PROTEINS; RECOMBINANT FUSION PROTEINS; TIME FACTORS;

EID: 48849083814     PISSN: 15524922     EISSN: 15524930     Source Type: Journal    
DOI: 10.1002/cyto.a.20581     Document Type: Article

References (22)

1. Wallrabe H, Periasamy A. Imaging protein molecules using FRET and FLIM microscopy. Curr Opin Biotechnol 2005;16:19-27.
2. Jares-Erijman EA, Jovin TM. FRET imaging. Nat Biotechnol 2003;21:1387-1395.
3. Sekar RB, Periasamy A. Fluorescence resonance energy transfer (FRET) microscopy imaging of live cell protein localizations. J Cell Biol 2003;160:629-633.
4. Gautier I, Tramier M, Durieux C, Coppey J, Pansu RB, Nicolas JC, Kemnitz K, Coppey-Moisan M. Homo-FRET microscopy in living cells to measure monomer-dimer transition of GFP-tagged proteins. Biophys J 2001;80:3000-3008.
5. Dong CY, French T, So PT, Buehler C, Berland KM, Gratton E. Fluorescence-lifetime imaging techniques for microscopy. Methods Cell Biol 2003;72:431-464.
6. Suhling K, French PM, Phillips D. Time-resolved fluorescence microscopy. Photochem Photobiol Sci 2005;4:13-22.
7. Waharte F, Spriet C, Heliot L. Setup and characterization of a multiphoton FLIM instrument for protein-protein interaction measurements in living cells. Cytometry Part A 2006;69:299-306.
8. Sillen A, Engelborghs Y. The correct use of "average" fluorescence parameters. Photochem Photobiol 1998;67:475-486.
9. Peter M, Ameer-Beg SM, Hughes MK, Keppler MD, Prag S, Marsh M, Vojnovic B, Ng T. Multiphoton-FLIM quantification of the EGFP-mRFP1 FRET pair for localization of membrane receptor-kinase interactions. Biophys J 2005;88:1224-1237.
10. Pelet S, Previte MJ, Laiho LH, So PT. A fast global fitting algorithm for fluorescence lifetime imaging microscopy based on image segmentation. Biophys J 2004;87:2807-2817.
11. Marquardt DW. An algorithm for least-squares estimation of non linear parameters. J Appl Math 1963;11:431-441.
12. Ritschard G, Zighed DA. Goodness-of-fit measures for inductions trees, In: Zhong N, Ras ZW, Tsumo S, Suzuki E editors, Foundations of Intelligent Systems. ISMIS03, LNAI 2871, Berlin: Springer; 2003. pp 57-64.
13. MacKay DJC. Information Theory, Inference, and Learning Algorithms. In: Press CU, editor. Cambridge: Cambridge University Press; 2003.
14. Myung IJ. The importance of complexity in model selection. J Math Psychol 2000; 44:190-204.
15. Wasserman L. Bayesian model selection and model averaging. J Math Psychol 2000; 44:92-107.
16. Zhong H, Wu X, Huang H, Fan Q, Zhu Z, Lin S. Vertebrate MAX-1 is required for vascular patterning in zebrafish. Proc Natl Acad Sci USA 2006;103:16800-16805.
17. Larson DR, Gosse JA, Holowka DA, Baird BA, Webb WW. Temporally resolved interactions between antigen-stimulated IgE receptors and Lyn kinase on living cells. J Cell Biol 2005;171:527-536.
18. Leonhardt H, Rahn HP, Weinzierl P, Sporbert A, Cremer T, Zink D, Cardoso MC. Dynamics of DNA replication factories in living cells. J Cell Biol 2000;149:271-280.
19. Monier S, Jollivet F, Janoueix-Lerosey I, Johannes L, Goud B. Characterization of novel Rab6-interacting proteins involved in endosome-to-TGN transport. Traffic 2002;3:289-297.
20. Wilcke M, Johannes L, Galli T, Mayau V, Goud B, Salamero J. Rab11 regulates the compartmentalization of early endosomes required for efficient transport from early endosomes to the trans-golgi network. J Cell Biol 2000;151:1207-1220.
21. Miserey-Lenkei S, Waharte F, Boulet A, Cuif MH, Tenza D, El Marjou A, Raposo G, Salamero J, Heliot L, Goud B, Monier S. Rab6-interacting protein 1 links Rab6 and Rabll function. Traffic 2007;8:1385-1403.
22. Rasband WS. ImageJ. Bethesda, MD: U.S. National Institutes of Health. 1997-2007; http://rsb.info.nih.gov/ij/.