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Volumn 2, Issue , 2008, Pages

Systematic reconstruction of TRANSPATH data into Cell System Markup Language

Author keywords

[No Author keywords available]

Indexed keywords

MUS; RATTUS;

EID: 48249136945     PISSN: None     EISSN: 17520509     Source Type: Journal    
DOI: 10.1186/1752-0509-2-53     Document Type: Article
Times cited : (10)

References (29)
  • 2
    • 0030026495 scopus 로고    scopus 로고
    • Qualitative analysis of biochemical reaction systems
    • 10.1016/0010-4825(95)00042-9 8654057
    • Reddy VN Liebman MN Mavrovouniotis ML Qualitative analysis of biochemical reaction systems Comput Biol Med 1996, 26:9-24 10.1016/ 0010-4825(95)00042-9 8654057
    • (1996) Comput Biol Med , vol.26 , pp. 9-24
    • Reddy, V.N.1    Liebman, M.N.2    Mavrovouniotis, M.L.3
  • 3
    • 0032229446 scopus 로고    scopus 로고
    • Quantitative modeling of biochemical networks
    • 11471241
    • Hofestädt R Thelen S Quantitative modeling of biochemical networks In Silico Biol 1998, 1(1):39-53 11471241
    • (1998) In Silico Biol , vol.1 , Issue.1 , pp. 39-53
    • Hofestädt, R.1    Thelen, S.2
  • 5
    • 0345096675 scopus 로고    scopus 로고
    • Steady state analysis of metabolic pathways using Petri nets
    • 14700469
    • Voss K Monika H Koch I Steady state analysis of metabolic pathways using Petri nets In Silico Biol 2003, 3(3):367-87 14700469
    • (2003) In Silico Biol , vol.3 , Issue.3 , pp. 367-387
    • Voss, K.1    Monika, H.2    Koch, I.3
  • 6
    • 0345602990 scopus 로고    scopus 로고
    • Topological analysis of metabolic networks based on Petri net theory
    • 12954094
    • Zevedei-Oancea I Schuster S Topological analysis of metabolic networks based on Petri net theory In Silico Biol 2003, 3(3):323-45 12954094
    • (2003) In Silico Biol , vol.3 , Issue.3 , pp. 323-345
    • Zevedei-Oancea, I.1    Schuster, S.2
  • 8
    • 33845569120 scopus 로고    scopus 로고
    • Petri net based descriptions for systematic understanding of biological pathways
    • Matsuno H Li C Miyano S Petri net based descriptions for systematic understanding of biological pathways IEICE Trans Fundam Electron Commun Comput Sci 2006, E89-A(11):3166-3174
    • (2006) IEICE Trans Fundam Electron Commun Comput Sci , vol.E89 , Issue.11 , pp. 3166-3174
    • Matsuno, H.1    Li, C.2    Miyano, S.3
  • 9
    • 34548302044 scopus 로고    scopus 로고
    • Petri net modelling of biological networks
    • 10.1093/bib/bbm029 17626066
    • Chaouiya C Petri net modelling of biological networks Briefings in Bioinformatics 2007, 8(4):210-219 10.1093/bib/bbm029 17626066
    • (2007) Briefings in Bioinformatics , vol.8 , Issue.4 , pp. 210-219
    • Chaouiya, C.1
  • 10
    • 18244391495 scopus 로고    scopus 로고
    • A versatile Petri net based architecture for modeling and simulation of complex biological processes
    • 15712121
    • Nagasaki M Doi A Matsuno H Miyano S A versatile Petri net based architecture for modeling and simulation of complex biological processes Genome Inform 2004, 15(1):180-197 15712121
    • (2004) Genome Inform , vol.15 , Issue.1 , pp. 180-197
    • Nagasaki, M.1    Doi, A.2    Matsuno, H.3    Miyano, S.4
  • 12
    • 0033670135 scopus 로고    scopus 로고
    • Pathway analysis in metabolic databases via differential metabolic display (DMD)
    • 10.1093/bioinformatics/16.9.825 11108705
    • Küffner R Zimmer R Lengauer T Pathway analysis in metabolic databases via differential metabolic display (DMD) Bioinformatics 2000, 16(9):825-836 10.1093/bioinformatics/16.9.825 11108705
    • (2000) Bioinformatics , vol.16 , Issue.9 , pp. 825-836
    • Küffner, R.1    Zimmer, R.2    Lengauer, T.3
  • 13
    • 33244465693 scopus 로고    scopus 로고
    • Knowledge representation model for systems-level analysis of signal transduction networks
    • 15706509
    • Lee D Zimmer R Lee S Hanisch D Park S Knowledge representation model for systems-level analysis of signal transduction networks Genome Inform 2004, 15(2):234-243 15706509
    • (2004) Genome Inform , vol.15 , Issue.2 , pp. 234-243
    • Lee, D.1    Zimmer, R.2    Lee, S.3    Hanisch, D.4    Park, S.5
  • 14
    • 33644817463 scopus 로고    scopus 로고
    • Colored Petri Net Modeling and Simulation of Signal Transduction Pathways
    • 10.1016/j.ymben.2005.10.001 16376130
    • Lee D Zimmer R Lee S Park S Colored Petri Net Modeling and Simulation of Signal Transduction Pathways Metabolic Engineering 2006, 8(2):112-122 10.1016/j.ymben.2005.10.001 16376130
    • (2006) Metabolic Engineering , vol.8 , Issue.2 , pp. 112-122
    • Lee, D.1    Zimmer, R.2    Lee, S.3    Park, S.4
  • 15
    • 33750998814 scopus 로고    scopus 로고
    • Structural Modeling and Analysis of Signaling Pathways Based on Petri Nets
    • 10.1142/S021972000600234X 17099944
    • Li C Suzuki S Ge Q Nakata M Matsuno H Miyano S Structural Modeling and Analysis of Signaling Pathways Based on Petri Nets J Bioinform Comput Biol 2006, 4(5):1119-40 10.1142/S021972000600234X 17099944
    • (2006) J Bioinform Comput Biol , vol.4 , Issue.5 , pp. 1119-1140
    • Li, C.1    Suzuki, S.2    Ge, Q.3    Nakata, M.4    Matsuno, H.5    Miyano, S.6
  • 19
    • 41849092276 scopus 로고    scopus 로고
    • Cell System Ontology: Representation for modeling, visualizing, and simulating biological pathways
    • 18467775
    • Jeong E Nagasaki M Saito A Miyano S Cell System Ontology: Representation for modeling, visualizing, and simulating biological pathways In Silico Biol 2007, 7(6):623-638 18467775
    • (2007) In Silico Biol , vol.7 , Issue.6 , pp. 623-638
    • Jeong, E.1    Nagasaki, M.2    Saito, A.3    Miyano, S.4
  • 22
    • 33748545276 scopus 로고    scopus 로고
    • Automatic drawing of biological networks using cross cost and subcomponent data
    • 16901086
    • Kato M Nagasaki M Doi A Miyano S Automatic drawing of biological networks using cross cost and subcomponent data Genome Inform 2005, 16(2):22-31 16901086
    • (2005) Genome Inform , vol.16 , Issue.2 , pp. 22-31
    • Kato, M.1    Nagasaki, M.2    Doi, A.3    Miyano, S.4
  • 23
    • 33947388382 scopus 로고    scopus 로고
    • An efficient grid layout algorithm for biological networks utilizing various biological attributes
    • 1821340 17338825 10.1186/1471-2105-8-76
    • Kojima K Nagasaki M Jeong E Kato M Miyano S An efficient grid layout algorithm for biological networks utilizing various biological attributes BMC Bioinformatics 2007, 8:76 1821340 17338825 10.1186/ 1471-2105-8-76
    • (2007) BMC Bioinformatics , vol.8 , pp. 76
    • Kojima, K.1    Nagasaki, M.2    Jeong, E.3    Kato, M.4    Miyano, S.5
  • 25
    • 2642533799 scopus 로고    scopus 로고
    • Genomic Object Net: I. A platform for modeling and simulating biopathways
    • 15130806
    • Nagasaki M Doi A Matsuno H Miyano S Genomic Object Net: I. A platform for modeling and simulating biopathways Applied Bioinformatics 2003, 2:181-184 15130806
    • (2003) Applied Bioinformatics , vol.2 , pp. 181-184
    • Nagasaki, M.1    Doi, A.2    Matsuno, H.3    Miyano, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.