Preparation of oligonucleotide microarrays on modified glass using a photoreactive heterobifunctional reagent, 1-N-(maleimidohexanoyl)-6-N-(anthraquinon-2-oyl) hexanediamine (MHAHD)

Surface Science

Volumn 602, Issue 14, 2008, Pages 2389-2394

  Choithani, Jyoti ^a   Sethi, Dalip ^a   Kumar, P ^a   Gupta, Kailash C ^a  

^a CSIR INSTITUTE OF GENOMICS AND INTEGRATIVE BIOLOGY   (India)

Author keywords

Heterobifunctional reagent; Hybridization; Immobilization; Microwaves; Mismatches; Oligonucleotide microarrays

Indexed keywords

KETONES; MICROWAVES; NUCLEOTIDES; REACTION KINETICS;

ANTHRAQUINONE (AQ); ELSEVIER (CO); FLUORESCENCE INTENSITY (FI); HEXANEDIAMINE; HYBRIDIZATION EFFICIENCY; IN ORDER; MALEIMIDE; MALEIMIDE GROUP; NOVE L APPROACH; OLIGONUCLEOTIDE ARRAYS; OLIGONUCLEOTIDE MICROARRAYS; PHOTO ACTIVE; SPEED UPS; THERMAL STABILITY;

OLIGONUCLEOTIDES;

EID: 48149110828     PISSN: 00396028     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.susc.2008.05.020     Document Type: Article

References (42)

1. Hermanson G.T. Bioconjugate Techniques (1996), Academic Press, San Diego
2. Yan M., Cai S.X., Wybourne M.N., and Keana J.F.W. Bioconjug. Chem. 5 (1994) 151
3. Collioud A., Clemence J.-F., Sanger M., and Sigrist H. Bioconjug. Chem. 4 (1993) 528
4. Sigrist H., Gao H., and Wegmuller B. Biotechnology 10 (1992) 1026
5. Sanger M., and Segrist H. Sensors and Actuators A: Physical 51 (1995) 83
6. Penchovsky R., Hirch-Hirschfeld E., and McCaskill J.S. Nucl. Acids Res. 28 (2000) e98
7. Toyokuni T., Walsh J.C., Dominguez A., Phelps M.E., Barrio J.R., Gambir S.S., and Satyamurthy N. Bioconjug. Chem. 14 (2003) 1253
8. Kumar P., Agarwal S.K., Misra A., and Gupta K.C. BioMed. Chem. Lett. 14 (2004) 1097
9. Kumar P., Choithani J., and Gupta K.C. Nucleic Acids Res. 32 (2004) e80
10. Kumar P., Agarwal S.K., and Gupta K.C. Bioconjug. Chem. 15 (2004) 7
11. Patnaik S., Swami A., Sethi D., Pathak A., Garg B.S., Gupta K.C., and Kumar P. Bioconjug. Chem. 18 (2007) 8
12. Reddy R.E., Chen Y.-Y., Johnson D.D., Beligere G.S., Rege S.D., Pan Y., and Thottathil J.K. Bioconjug. Chem. 16 (2005) 1323
13. Vaijayanthi B., Kumar P., Ghosh P.K., and Gupta K.C. Ind. J. Biochem. Biophys. 40 (2003) 377
14. Hacia J.G., Brody L.C., Chee M.S., Fodor S.P.A., and Collins F.S. Nature Genet. 14 (1996) 441
15. Chee M., Yang R., Hubbell E., Berno A., Huang X.C., Stern D., Winkler J., Lockhort D.J., Morris M.S., and Ford S.P. Science 274 (1996) 610
16. DeRisi J., Penland L., Brown O.P., Bittner M.L., Meltzer P.S., Ray M., Chen Y., Su Y.A., and Trent J.M. Nature Genet. 14 (1996) 457
17. Schena M., Shalon D., Heller R., Chai A., Brown P.O., and Davis R.W. Proc. Natl. Acad. Sci. USA 93 (1996) 10614
18. Pease A.C., Solas D., Sullivan E.J., Cronin M.T., Holmes C.P., and Fodor S.P. Proc. Natl. Acad. Sci. USA 91 (1994) 5022
19. Hacia J.G., Brody L.C., and Collins F.S. Mol. Psychiatry 3 (1998) 483
20. Milosavljevic A., Savkovic S., Crkvenjakov R., Salbego D., Serrato H., Kreuzer H., Gemmell A., Batus S., Grujie D., Carnahan S., Paunesku T., and Tepavcevic J. Genomics 37 (1996) 77
21. Heller R.A., Schena M., Chai A., Shalon D., Bedilion T., Gilmore J., Woolley D.E., and Davis R.W. Proc. Natl. Acad. Sci. USA 94 (1997) 2150
22. Cheung V.G., Gregg J.P., Gogolin-Ewens K.J., Bandong J., Stanley C.A., Baker L., Higgins M.J., Nowak N.J., Shows T.B., Ewens W.J., and Spielman R.S. Nature Genet. 18 (1998) 225
23. Barone A.D., Beecher J.E., Bury P.A., Chen C., Doede T., Fidanza J.A., and McGall G.H. Nucleosides Nucleotides Nucleic Acids 20 (2001) 525
24. Southern E.M., Case-Green S.C., Elder J.K., Johnson M., Mir K.U., Wang L., and Williams J.C. Nucleic Acids Res. 22 (1994) 1368
25. Maskos U., and Southern E.M. Nucleic Acids Res. 20 (1992) 1679
26. McGall G.H., Labadie J., Brock P., Wallraff G., Nguyen T., and Hinsberg W. Proc. Natl Acad. Sci. USA 93 (1996) 13555
27. Okamoto T., Suzuki T., and Yamamoto N. Nature Biotechnol. 18 (2000) 438
28. Morozov V.N., and Ya Morozova T. Anal. Chem. 71 (1999) 3110
29. Cheung V.G., Morley M., Aguilar F., Massimi A., Kucherlapati R., and Childs G. Nature Genet. 21 (1999) 15
30. Beier M., and Hoheisel J.D. Nucleic Acids Res. 27 (1999) 1970
31. Rasmussen S.R., Larsen M.R., and Rasmussen R.E. Anal. Biochem. 198 (1991) 138
32. Proudnikov D., Timofeev E., and Mirzabekov A. Anal. Biochem. 259 (1998) 34
33. Chrisey L.A., Lee G.U., and O′Ferrall C.E. Nucleic Acids Res. 24 (1996) 3031
34. Cohen G., Deutsch J., Fineberg J., and Levine A. Nucleic Acids Res. 25 (1997) 911
35. Wolkenberg S.E., Shipe W.D., Lindsley C.W., Guare J.P., and Pawluczyk J.M. Curr. Opin. Drug Discov. Devel. 8 (2005) 701
36. Roberts B.A., and Strauss C.R. Acc. Chem. Res. 38 (2005) 653
37. Kalgutkar A.S., Crews B.C., and Marnett L.J. J. Med. Chem. 39 (1996) 1692
38. Kumar P., Bhatia D., Rastogi R.C., and Gupta K.C. BioMed. Chem. Lett. 6 (1996) 683
39. Gupta K.C., Sharma P., Sathyanarayana S., and Kumar P. Tetrahedron Lett. 31 (1990) 247
40. Choithani J., Kumar P., and Gupta K.C. Anal. Biochem. 357 (2006) 240
41. Koch T., Jacobsen N., Fensholdt N., Boas U., Fenger M., and Jacobsen M.H. Bioconjug. Chem. 11 (2000) 474
42. Choithani J., Goel M., Sharma A.K., and Gupta K.C. Anal. Biochem. 355 (2006) 313