Biodegradation of carbazole in oil/water biphasic system by a newly isolated bacterium Klebsiella sp. LSSE-H2

Biochemical Engineering Journal

Volumn 41, Issue 2, 2008, Pages 166-170

  Li, Yu Guang ^a   Li, Wang Liang ^a   Huang, Jie Xun ^a   Xiong, Xiao Chao ^a   Gao, Hong Shuai ^a   Xing, Jian Min ^a   Liu, Hui Zhou ^a  

^a INSTITUTE OF PROCESS ENGINEERING   (China)

Author keywords

Biocatalysis; Biodegradation; Biodesulfurization; Carbazole; Microbial growth; Oil water biphasic system

Indexed keywords

BIOCHEMISTRY; BIODEGRADATION; NITROGEN; SOIL POLLUTION;

BIPHASIC; BIPHASIC SYSTEMS; CARBAZOLE (CZ); CO CULTURES; CONTAMINATED SOILS; DENITROGENATION; DIBENZOTHIOPHENE (DBTS); ELSEVIER (CO); ISOLATED BACTERIUM; MODEL DIESEL; OIL WATER; ORGANIC MEDIUM; PSEUDOMONAS DELAFIELDII R-8; SOLVENT TOLERANCE;

STRAIN;

CARBAZOLE DERIVATIVE; OIL; ORGANIC COMPOUND; WATER;

AQUEOUS SOLUTION; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BIODEGRADATION; CATALYSIS; DESULFURIZATION; KLEBSIELLA; MICROBIAL GROWTH; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PSEUDOMONAS; PSEUDOMONAS DELAFIELDII;

ACIDOVORAX DELAFIELDII; BACTERIA (MICROORGANISMS); KLEBSIELLA SP.;

EID: 47849099069     PISSN: 1369703X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bej.2008.04.009     Document Type: Article

References (23)

1. Benedik M.J., Gibbs P.R., Riddle R.R., and Willson R.C. Microbial denitrogenation of fossil fuels. Trends Biotechnol. 16 (1998) 390-395
2. Ouchiyama N., Zhang Y., Omori T., and Kodama T. Biodegradation of carbazole by Pseudomonas spp. CA06 and CA10. Biosci. Biotechnol. Biochem. 57 (1993) 455-460
3. Gieg L.M., Otter A., and Fedorak P.M. Carbazole degradation by Pseudomonas sp. LD2: metabolic characteristics and the identification of some metabolites. Environ. Sci. Technol. 30 (1996) 575-585
4. Li L., Li Q., Li F., Shi Q., Yu B., Liu F., and Xu P. Degradation of carbazole and its derivatives by a Pseudomonas sp. Appl. Microbiol. Biotechnol. 73 (2006) 941-948
5. Kilbane J.J., Daram A., Abbasian J., and Kayser K.J. Isolation and characterization of Sphingomonas sp. GTIN11 capable of carbazole metabolism in petroleum. Biochem. Biophys. Res. Commun. 297 (2002) 242-248
6. 2. Curr. Microbiol. 44 (2002) 251-256
7. Inoue K., Habe H., Yamane H., and Nojiri H. Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177. Appl. Environ. Microbiol. 72 (2006) 3321-3329
8. Castorena G., Mugica V., Le Borgne S., Acuna M.E., Bustos-Jaimes I., and Aburto J. Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC. J. Appl. Microbiol. 100 (2006) 739-745
9. Schneider J., Grosser R.J., Jayasimhulu K., Xue W., Kinkle B., and Warshawsky D. Biodegradation of carbazole by Ralstonia sp. RJGII.123 isolated from a hydrocarbon contaminated soil. Can. J. Microbiol. 46 (2000) 269-277
10. Sato S.I., Nam J.W., Kasuga K., Nojiri H., Yamane H., and Omori T. Identification and characterization of genes encoding carbazole 1, 9a-dioxygenase in Pseudomonas sp. strain CA10. J. Bacteriol. 179 (1997) 4850-4858
11. Nam J.W., Nojiri H., Noguchi H., Uchimura H., Yoshida T., Habe H., Yamane H., and Omori T. Purification and characterization of carbazole 1, 9a-Dioxygenase, a three-component dioxygenase system of Pseudomonas resinovorans strain CA10. Appl. Environ. Microbiol. 68 (2002) 5882-5890
12. Yu B., Xu P., Zhu S., Cai X., Wang Y., Li L., Li F., Liu X., and Ma C. Selective biodegradation of S and N heterocycles by a recombinant Rhodococcus erythropolis strain containing carbazole dioxygenase. Appl. Environ. Microbiol. 72 (2006) 2235-2238
13. Kilbane J.J. Microbial biocatalyst developments to upgrade fossil fuels. Curr. Opin. Biotechnol. 17 (2006) 305-314
14. Shan G.B., Xing J.M., Zhang H.Y., and Liu H.Z. Biodesulfurization of dibenzothiophene by microbial cells coated with magnetite nanoparticles. Appl. Environ. Microbiol. 71 (2005) 4497-4502
15. Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl K. Short Protocols in Molecular Biology. 4th edition (1999), Wiley, New York
16. Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
17. Kirimura K., Nakagawa H., Tsuji K., Matsuda K., Kurane R., and Usami S. Selective and continuous degradation of carbazole contained in petroleum oil by resting cells of Sphingomonas sp. CDH-7. Biosci. Biotechnol. Biochem. 63 (1999) 1563-1568
18. Nielsen L.E., Kadavy D.R., Rajagopal S., Drijber R., and Nickerson K.W. Survey of extreme solvent tolerance in gram-positive cocci: membrane fatty acid changes in Staphylococcus haemolyticus grown in toluene. Appl. Environ. Microbiol. 71 (2005) 5171-5176
19. Sikkema J., de Bont J.A., and Poolman B. Mechanisms of membrane toxicity of hydrocarbons. Microbiol. Rev. 59 (1995) 201-222
20. Inoue A., and Horikoshi K. Estimation of solvent-tolerance of bacteria by the solvent parameter Log P. J. Ferment. Bioeng. 71 (1991) 194-196
21. Li L., Xu P., and Blankespoor H.D. Degradation of carbazole in the presence of non-aqueous phase liquids by Pseudomonas sp. Biotechnol. Lett. 26 (2004) 581-584
22. Nakamura C.E., and Whited G.M. Metabolic engineering for the microbial production of 1,3-propanediol. Curr. Opin. Biotechnol. 14 (2003) 454-459
23. Kao C.M., Chen K.F., Liu J.K., Chou S.M., and Chen S.C. Enzymatic degradation of nitriles by Klebsiella oxytoca. Appl. Microbiol. Biotechnol. 71 (2006) 228-233