Cyanobacteriochrome CcaS is the green light receptor that induces the expression of phycobilisome linker protein

Proceedings of the National Academy of Sciences of the United States of America

Volumn 105, Issue 28, 2008, Pages 9528-9533

  Hirose, Yuu ^a   Shimada, Takashi ^b   Narikawa, Rei ^a   Katayama, Mitsunori ^c   Ikeuchi, Masahiko ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b SHIMADZU CORPORATION   (Japan)

^c NIHON UNIVERSITY   (Japan)

Author keywords

Chromatic adaptation; Cyanobacteria; Photoreceptor; Phycocyanobilin; Phytochrome

Indexed keywords

BACTERIAL PROTEIN; PHYCOBILISOME LINKER PROTEIN; PROTEIN HISTIDINE KINASE;

ACCLIMATIZATION; ARTICLE; AUTOPHOSPHORYLATION; BINDING SITE; CHEMICAL BOND; CHROMATOPHORE; COLORIMETRY; CYANOBACTERIOCHROME; DENATURATION; ESCHERICHIA COLI; IRRADIATION; MASS SPECTROMETRY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTORECEPTOR; PHYCOBILISOME; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN EXPRESSION; UPREGULATION;

ADAPTATION, PHYSIOLOGICAL; BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; CYANOBACTERIA; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION; LIGHT; MOLECULAR SEQUENCE DATA; PHOSPHORYLATION; PHOTORECEPTORS, MICROBIAL; PHYCOBILINS; PHYCOBILISOMES; PHYCOCYANIN; PROTEIN STRUCTURE, TERTIARY; SYNECHOCYSTIS;

CYANOBACTERIA; ESCHERICHIA COLI; SYNECHOCYSTIS; SYNECHOCYSTIS SP. PCC 6803;

EID: 47749102135     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0801826105     Document Type: Article

References (37)

1. Karniol B, Wagner JR, Walker JM, Vierstra RD (2005) Phylogenetic analysis of the phytochrome superfamily reveals distinct microbial subfamilies of photoreceptors. Biochem J 392:103-116.
2. Lagarias JC, Rapoport H (1980) Chromopeptides from phytochrome - The structure and linkage of the Pr form of the phytochrome chromophore. J Am Chem Soc 102:4821-4828.
3. Hahn J, et al. (2006) Probing protein-chromophore interactions in Cph1 phytochrome by mutagenesis. FEBS 273:1415-1429.
4. Lamparter T, et al. (2004) The biliverdin chromophore binds covalently to a conserved cysteine residue in the N-terminus of Agrobacterium phytochrome Agp1. Biochemistry 43:3659-3669.
5. Rockwell NC, Su YS, Lagarias JC (2006) Phytochrome structure and signaling mechanisms. Annu Rev Plant Biol 57:837-858.
6. Wagner JR, Brunzelle JS, Forest KT, Vierstra RD (2005) A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome. Nature 438:325-331.
7. Wagner JR, Zhang J, Brunzelle JS, Vierstra RD, Forest KT (2007) High resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution. J Biol Chem 282:12298-12309.
8. Yang X, Stojkovic EA, Kuk J, Moffat K (2007) Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion. Proc Natl Acad Sci USA 104:12571-12576.
9. Yoshihara S, Katayama M, Geng X, Ikeuchi M (2004) Cyanobacterial phytochrome-like PixJ1 holoprotein shows novel reversible photoconversion between blue- and green-absorbing forms. Plant Cell Physiol 45:1729-1737.
10. Kehoe DM, Grossman AR (1996) Similarity of a chromatic adaptation sensor to phytochrome and ethylene receptors. Science 273:1409-1412.
11. Schmitz O, Katayama M, Williams SB, Kondo T, Golden SS (2000) CikA, a bacteriophytochrome that resets the cyanobacterial circadian clock. Science 289:765-768.
12. Wilde A, Churin Y, Schubert H, Borner T (1997) Disruption of a Synechocystis sp. PCC 6803 gene with partial similarity to phytochrome genes alters growth under changing light qualities. FEBS Lett 406:89-92.
13. Yoshihara S, Ikeuchi M (2004) Phototactic motility in the unicellular cyanobacterium Synechocystis sp. PCC 6803. Photochem Photobiol Sci 3:512-518.
14. Yoshihara S, et al. (2006) Reconstitution of blue-green reversible photoconversion of a cyanobacterial photoreceptor, PixJ1, in phycocyanobilin-producing Escherichia coli. Biochemistry 45:3775-3784.
15. Ishizuka T, et al. (2006) Characterization of cyanobacteriochrome TePixJ from a thermophilic cyanobacterium Thermosynechococcus elongatus strain BP-1. Plant Cell Physiol 47:1251-1261.
16. Ishizuka T, Narikawa R, Kohchi T, Katayama M, Ikeuchi M (2007) Cyanobacteriochrome TePixJ of Thermosynechococcus elongatus harbors phycoviolobilin as a chromophore. Plant Cell Physiol 48:1385-1390.
17. Grossman AR, Schaefer MR, Chiang GG, Collier JL (1993) The phycobilisome, a light-harvesting complex responsive to environmental conditions. Microbiol Rev 57:725-749.
18. Tandeau de Marsac N (1977) Occurrence and nature of chromatic adaptation in cyanobacteria. J Bacteriol 130:82-91.
19. Bjorn GS, Bjorn LO (1976) Photochromic pigments from blue-green algae: Phycochrome-a, phycochrome-b, and phycochrome-c. Physiol Plant 36:297-304.
20. Ohki K, Fujita Y (1979) Photoreversible absorption changes of guanidine-HCl-treated phycocyanin and allophycocyanin isolated from the blue-green alga Tolypothrix tenuis. Plant Cell Physiol 20:483-490.
21. Kehoe DM, Gutu A (2006) Responding to color: The regulation of complementary chromatic adaptation. Annu Rev Plant Biol 57:127-150.
22. Terauchi K, Montgomery BL, Grossman AR, Lagarias JC, Kehoe DM (2004) RcaE is a complementary chromatic adaptation photoreceptor required for green and red light responsiveness. Mol Microbiol 51:567-577.
23. Seib LO, Kehoe DM (2002) A turquoise mutant genetically separates expression of genes encoding phycoerythrin and its associated linker peptides. J Bacteriol 184:962-970.
24. Kaytayama M, Ikeuchi M (2006) Perception and transduction of light signals by cyanobacteria. Frontiers in Life Sciences, eds Fujiwara M, Sato N, Ishiura S (Research Signpost, Kerala, India), pp 65-90.
25. Kondo K, Geng XX, Katayama M, Ikeuchi M (2005) Distinct roles of CpcG1 and CpcG2 in phycobilisome assembly in the cyanobacterium Synechocystis sp. PCC 6803. Photosynth Res 84:269-273.
26. Kondo K, Ochiai Y, Katayama M, Ikeuchi M (2007) The membrane-associated CpcG2-phycobilisome in Synechocystis: A new photosystem I antenna. Plant Physiol 144:1200-1210.
27. Ikeuchi M, Tabata S (2001) Synechocystis sp. PCC 6803 - A useful tool in the study of the genetics of cyanobacteria. Photosynth Res 70:73-83.
28. Okamoto S, Ikeuchi M, Ohmori M (1999) Experimental analysis of recently transposed insertion sequences in the cyanobacterium Synechocystis sp. PCC 6803. DNA Res 6:265-273.
29. Christie JM (2007) Phototropin blue-light receptors. Annu Rev Plant Biol 58:21-45.
30. Berkelman TR, Lagarias JC (1986) Visualization of bilin-linked peptides and proteins in polyacrylamide gels. Anal Biochem 156:194-201.
31. Mukougawa K, Kanamoto H, Kobayashi T, Yokota A, Kohchi T (2006) Metabolic engineering to produce phytochromes with phytochromobilin, phycocyanobilin, or phycoerythrobilin chromophore in Escherichia coli. FEBS Lett 580:1333-1338.
32. Rudiger W, Thummler F, Cmiel E, Schneider S (1983) Chromophore structure of the physiologically active form (P(fr)) of phytochrome. Proc Natl Acad Sci USA 80:6244-6248.
33. Hubschmann T, Borner T, Hartmann E, Lamparter T (2001) Characterization of the Cph1 holo-phytochrome from Synechocystis sp. PCC 6803. Eur J Biochem 268:2055-2063.
34. Yeh KC, Wu SH, Murphy JT, Lagarias JC (1997) A cyanobacterial phytochrome two-component light sensory system. Science 277:1505-1508.
35. von Stetten D, et al. (2007) Highly conserved residues Asp-197 and His-250 in Agp1 phytochrome control the proton affinity of the chromophore and Pfr formation. J Biol Chem 282:2116-2123.
36. Yoshihara S, Suzuki F, Fujita H, Geng XX, Ikeuchi M (2000) Novel putative photoreceptor and regulatory genes required for the positive phototactic movement of the unicellular motile cyanobacterium Synechocystis sp. PCC 6803. Plant Cell Physiol 41:1299-1304.
37. Rippka R (1988) Isolation and purification of cyanobacteria. Methods Enzymol 167:3-27.