Molecular architecture of the major histocompatibility complex class I-binding site of Ly49 natural killer cell receptors

Journal of Biological Chemistry

Volumn 283, Issue 24, 2008, Pages 16840-16849

  Deng, Lu ^a   Cho, Sangwoo ^a   Malchiodi, Emilio L ^a,b   Kerzic, Melissa C ^a   Dam, Julie ^a   Mariuzza, Roy A ^a  

^a UNIVERSITY OF MARYLAND BIOTECHNOLOGY INSTITUTE   (United States)

^b UNIVERSIDAD DE BUENOS AIRES   (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; BIOCHEMISTRY; CELL MEMBRANES; INTERNET;

BINDING SPECIFICITIES; CENTRAL REGIONS; FLANKING REGIONS; FUNCTIONAL ARCHITECTURES; I COMPLEXES; INNATE IMMUNE RESPONSES; MAJOR HISTOCOMPATIBILITY COMPLEX CLASSES; MODULAR DESIGNS; MOLECULAR ARCHITECTURES; MOLECULAR FEATURES; MUTATIONAL ANALYSIS; NATURAL KILLER CELL RECEPTORS; NATURAL KILLER CELLS; NK CELLS; TARGET CELLS; TUMOR CELLS;

BINDING SITES;

MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1; NATURAL KILLER CELL RECEPTOR; PROTEIN LY49C; PROTEIN LY49G; UNCLASSIFIED DRUG; HLA ANTIGEN CLASS 1; KILLER CELL LECTIN LIKE RECEPTOR, SUBFAMILY A; KILLER CELL LECTIN-LIKE RECEPTOR, SUBFAMILY A; LECTIN; LY ANTIGEN;

ALLELE; ARTICLE; BINDING SITE; CELL FUNCTION; COMPLEX FORMATION; CONTROLLED STUDY; CRYSTAL STRUCTURE; LIGAND BINDING; MOUSE; NATURAL KILLER CELL; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN STRUCTURE; AMINO ACID SEQUENCE; CHEMICAL STRUCTURE; CHEMISTRY; CONFORMATION; DIMERIZATION; GENE EXPRESSION REGULATION; HUMAN; KINETICS; METABOLISM; MOLECULAR GENETICS; PROTEIN BINDING; SEQUENCE HOMOLOGY; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ANTIGENS, LY; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; GENE EXPRESSION REGULATION; HISTOCOMPATIBILITY ANTIGENS CLASS I; HUMANS; KILLER CELLS, NATURAL; KINETICS; LECTINS, C-TYPE; MODELS, MOLECULAR; MOLECULAR CONFORMATION; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 47749085531     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M801526200     Document Type: Article

References (34)

1. McQueen, K. L., and Parham, P. (2002) Curr. Opin. Immunol. 14, 615-621
2. Plougastel, B. F. M., and Yokoyama, W. M. (2003) Nat. Rev. Immunol. 3, 304-316
3. Lanier, L. L. (2005) Annu. Rev. Immunol. 23, 225-274
4. Natarajan, K., Dimasi, N., Wang, J., Mariuzza, R. A., and Margulies, D. H. (2002) Annu. Rev. Immunol. 20, 853-885
5. Deng, L., and Mariuzza, R. A. (2006) Semin. Immunol. 18, 159-166
6. Vivier, E., Tomasello, E., and Paul, P. (2002) Curr. Opin. Immunol. 14, 306-311
7. Anderson, S. K., Ortaldo, J. R., and McVicar, D. W. (2001) Immunol. Rev. 181, 79-89
8. Arase, H., Mocarski, E. S., Campbell, A. E., Hill, A. B., and Lanier, L. L. (2002) Science 296, 1323-1329
9. Smith, H. R., Heusel, J. W., Mehta, I. K., Kim, S., Dorner, B. G., Naidenko, O. V., Iizuka, K., Furukawa, H., Beckman, D. L., Pingel, J. T., Scalzo, A. A., Fremont, D. H., and Yokoyama, W. M. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 8826-8831
10. Derosiers, M.-P., Kielczewska, A., Loredi-Osti, J.-C., Adam, S. G., Makrigiannis, A. P., Lemiex, S., Pham, T., Lodoen, M. B., Morgan, K., Lanier, L. L., and Vidal, S. M. (2005) Nat. Genet. 37, 593-599
11. Tormo, J., Natarajan, K., Margulies, D. H., and Mariuzza, R. A. (1999) Nature 402, 623-631
12. Dam, J., Guan, R., Natarajan, K., Dimasi, N., Chlewicki, L. K., Kranz, D. M., Schuck, P., Margulies, D. H., and Mariuzza, R. A. (2003) Nat. Immunol. 4, 1213-1222
13. Wang, J., Whitman, M. C., Natarajan, K., Tormo, J., Mariuzza, R. A., and Margulies, D. H. (2002) J. Biol. Chem. 277, 1433-1442
14. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
15. Sheldrick, G. M. (2002) XPREP, version 6.10, Brucker-AXS, Madison, WI
16. Storoni, L. C., McCoy, A. J., and Read, R. J. (2004) Acta Crystallogr. Sect. D Biol. Crystallogr. 60, 432-438
17. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. Sect. D Biol. Crystallogr. 53, 240-255
18. McRee, D. E. (1999) J. Struct. Biol. 125, 156-165
19. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291
20. Collaborative Computational Project, Number 4 (1994) Acta Crystallogr. Sect. D Biol. Crystallogr. 50, 240-255
21. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. Sect. D Biol. Crystallogr. 54, 905-921
22. Doucey, M. A., Scarpellino, L., Zimmer, J., Guillaume, P., Luescher, I. F., Dron, C., and Held, W. (2004) Nat. Immunol. 5, 328-336
23. Back, J., Chalifour, A., Scarpellino, L., and Held, W. (2007) Proc. Natl. Acad. Sci. U. S. A. 104, 3978-3983
24. Held, W., and Mariuzza, R. A. (2008) Nat. Rev. Immunol. 8, 269-278
25. Li, P., Morris, D. L., Willcox, B. E., Steinle, A., Spies, T., and Strong, R. K. (2001) Nat. Immunol. 2, 443-451
26. Weis, W. I., Kahn, R., Fourme, R., Drickamer, K., and Hendrickson, W. A. (1991) Science 254, 1608-1615
27. Drickamer, K. (1999) Curr. Opin. Struct. Biol. 9, 585-590
28. Dam, J., Baber, J., Grishaev, A., Malchiodi, E. L., Schuck, P., Bax, A., and Mariuzza, R. A. (2006) J. Mol. Biol. 362, 102-113
29. Silver, E. T., Lavender, K. J., Gong, D. E., Hazes, B., and Kane, K. P. (2002) J. Immunol. 169, 4752-4760
30. Ma, B. J., Silver, E. T., Hazes, B., and Kane, K. P. (2003) J. Immunol. 171, 5337-5344
31. Brennan, J., Mahon, G., Mager, D. L., Jeffries, W. A., and Takei, F. (1996) J. Exp. Med. 183, 1553-1559
32. Hanke, T., Takizawa, H., McMahon, C. W., Busch, D. H., Pamer, E. G., Miller, J. D., Altman, J. D., Liu, Y., Cado, D., Lemonnier, F. A., Bjorkman, P. J., and Raulet, D. H. (1999) Immunity 11, 67-77
33. Süel, G. M., Lockless, S. W., Wall, M. A., and Ranganathan, R. (2003) Nat. Struct. Biol. 10, 59-69
34. Moza, B., Buonpane, R. A., Zhu, P., Herfst, C. A., Nur-ur Rahman, A. K. M., McCormick, J. K., Kranz, D. M., and Sundberg, E. J. (2006) Proc. Natl. Acad. Sci. U. S. A. 103, 9867-9872