Relevance between lipid metabolism-associated genes and rat liver regeneration

Hepatology Research

Volumn 38, Issue 8, 2008, Pages 825-837

  Xu, Cunshuan ^a,b   Lin, Fang ^b   Qin, Shaowei ^b  

^a HENAN NORMAL UNIVERSITY   (China)

^b Key Laboratory for Cell Differentiation Regulation   (China)

Author keywords

Lipid metabolism associated genes; Liver regeneration; Partial hepatectomy; Rat Genome 230 2.0 array

Indexed keywords

(S) 2 HYDROXY ACID OXIDASE; ACYL COENZYME A DESATURASE; ADENOSINE TRIPHOSPHATASE; ALCOHOL DEHYDROGENASE; ANDROGEN; ARACHIDONATE 12 LIPOXYGENASE; ARYLSULFATASE; CARNITINE ACETYLTRANSFERASE; CARNITINE PALMITOYLTRANSFERASE; COMPLEMENTARY DNA; CYTOCHROME P450; ESTROGEN; EXCITATORY AMINO ACID TRANSPORTER 3; GLUTARYL COENZYME A DEHYDROGENASE; GLUTATHIONE TRANSFERASE; GLYCOSPHINGOLIPID; LANOSTEROL SYNTHASE; LEUKOTRIENE; PHOSPHATIDYLINOSITOL; PHOSPHOLIPASE C; PROGESTERONE; PROSTAGLANDIN; PROTEIN KINASE; RNA; SPHINGOMYELIN; SPHINGOMYELIN PHOSPHODIESTERASE; SQUALENE MONOOXYGENASE; STEROID DELTA ISOMERASE; TRIACYLGLYCEROL;

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CELL CYCLE G0 PHASE; CELL CYCLE G1 PHASE; CELL DIFFERENTIATION; CELL PROLIFERATION; CHOLESTEROL METABOLISM; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DOWN REGULATION; ESTROGEN SYNTHESIS; FATTY ACID SYNTHESIS; GENE EXPRESSION; GENE EXPRESSION REGULATION; LIPID METABOLISM; LIPOGENESIS; LIVER CELL; LIVER REGENERATION; NONHUMAN; PARTIAL HEPATECTOMY; PHOSPHOINOSITIDE METABOLISM; PRIORITY JOURNAL; PROGESTERONE SYNTHESIS; PROSTAGLANDIN SYNTHESIS; PROTEIN FUNCTION; RAT; UPREGULATION;

EID: 47649120987     PISSN: 13866346     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1872-034X.2008.00345.x     Document Type: Article

References (50)

1. Fausto N, Campbell JS, Riehle KJ. Liver regeneration. Hepatol 2006; 43: 45-53.
2. Michalopoulos GK, DeFrances M. Liver regeneration. Adv Biochem Eng Biotechnol 2005; 93: 101-34.
3. Higgins GM, Anderson RM. Experimental pathology of the liver: restoration of the liver of the white rat following partial surgical removal. Arch Pathol 1931; 12: 186-202.
4. Kountouras J, Boura P, Lygidakis NJ. Liver regeneration after hepatectomy. Hepatogastroenterology 2001; 48: 556-62.
5. Xu CS, Zhao LF, Yang KJ, Zhang JB. The origin and the function of liver stem cell. Acta Biol Exp Sin 2004; 37: 72-7.
6. Nagashima S, Yagyu H, Ishibashi S. Abnormalities of the enzymes involved in lipid metabolism. Nippon Rinsho 2007; 65: 93-9.
7. Bennet AM, Di Angelantonio E, Ye Z et al. Association of apolipoprotein E genotypes with lipid levels and coronary risk. JAMA 2007; 298: 1300-11.
8. Jiang JT, Xu N, Zhang XY, Wu CP. Lipids changes in liver cancer. J Zhejiang Univ Sci B 2007; 8: 398-409.
9. Reddy JK, Rao MS. Lipid metabolism and liver inflammation. II. Fatty liver disease and fatty acid oxidation. Am J Physiol Gastrointest Liver Physiol 2006; 290: G852-8.
10. Frayn KN, Arner P, Yki-Järvinen H. Fatty acid metabolism in adipose tissue, muscle and liver in health and disease. Essays Biochem 2006; 42: 89-103.
11. Knepp JH, Geahr MA, Forman MS, Valsamakis A. Comparison of automated and manual nucleic acid extraction methods for detection of enterovirus RNA. J Clin Microbiol 2003; 41: 3532-6.
12. Nuyts S, Van Mellaert L, Lambin P, Anne J. Efficient isolation of total RNA from clostridium without DNA contamination. J Microbiol Methods 2001; 44: 235-8.
13. Arkin A, Ross J, McAdams HH. Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells. Genetics 1998; 149: 1633-48.
14. Li L, Roden J, Shapiro BE etal. Reproducibility, fidelity, and discriminant validity of mRNA amplification for microarray analysis from primary hematopoietic cells. J Mol Diagn 2005; 7: 48-56.
15. Collins JF. Gene chip analyses reveal differential genetic responses to iron deficiency in rat duodenum and jejunum. Biol Res 2006; 39: 25-37.
16. Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci 1998; 95: 14863-8.
17. Werner T. Cluster analysis and promoter modelling as bioinformatics tools for the identification of target genes from expression array data. Pharmacogenomics 2001; 2: 25-36.
18. Falany JL, Krasnykh V, Mikheeva G, Falany CN. Isolation and expression of an isoform of rat estrogen sulfotransferase. J Steroid Biochem Mol Biol 1995; 52: 35-44.
19. Steinberg GR, Dyck DJ, Calles-Escandon J et al. Chronic leptin administration decreases fatty acid uptake and fatty acid transporters in rat skeletal muscle. J Biol Chem 2002; 277: 8854-60.
20. Ha J, Daniel S, Kong IS, Park CK, Tae HJ, Kim KH. Cloning of human acetyl-CoA carboxylase cDNA. Eur J Biochem 1994; 219: 297-306.
21. Okazaki Y, Furuno M, Kasukawa T etal. The FANTOM Consortium and the RIKEN genome exploration Research Group Phase I and II Team. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature 2002; 420: 563-73.
22. Stanczak H, Stanczak JJ, Singh I. Chromosomal localization of the human gene for palmitoyl-CoA ligase (FACL1). Cytogenet Cell Genet 1992; 59: 17-19.
23. Balcarek JM, Theisen TW, Cook MN et al. Isolation and characterization of a cDNA clone encoding rat 5-lipoxygenase. J Biol Chem 1988; 263: 13937-41.
24. Xu CS, Chang CF. Expression profiles of the genes associated with metabolism and transport of amino acids and their derivatives in rat liver regeneration. Amino Acids 2007; 34: 91-102.
25. Xu CS, Zhang SB, Chen XG et al. Correlation analysis of liver tumor-associated genes with liver regeneration. World J Gastroenterol 2007; 13: 3323-32.
26. Urade M, Izumi R, Kitagawa H. Inhibition of 5-lipoxygenase promotes the regeneration of the liver after partial hepatectomy in normal and icteric rats. Hepatology 1996; 23: 544-8.
27. Spolarics Z, Tanacs B, Garzo T et al. Prostaglandin and thromboxane synthesizing activity in isolated murine hepatocytes and nonparenchymal liver cells. Prostaglandins Leukot Med 1984; 16: 379-88.
28. Jakobsson PJ, Thoren S, Morgenstern R, Samuelsson B. Identification of human prostaglandin E synthase: A microsomal, glutathione-dependent, inducible enzyme, constituting a potential novel drug target. Proc Natl Acad Sci USA 1999; 96: 7220-5.
29. Cases S, Stone SJ, Zhou P et al. Cloning of DGAT2, a second mammalian diacylglycerol acyltransferase, and related family members. J Biol Chem 2001; 276: 38870-6.
30. Hjorth A, Carriere F, Cudrey C et al. A structural domain (the lid) found in pancreatic lipases is absent in the guinea pig (phospho) lipase. Biochemistry 1993; 32: 4702-7.
31. Murray AB, Strecker W, Silz S. Ultrastructural changes in rat hepatocytes after partial hepatectomy, and comparison with biochemical results. J Cell Sci 1981; 50: 433-48.
32. McAllister G, Whiting P, Hammond EA et al. cDNA cloning of human and rat brain myo-inositol monophosphatase. Expression and characterization of the human recombinant enzyme. Biochem J 1992; 284: 749-54.
33. Lin LL, Wartmann M, Lin AY, Knopf JL, Seth A, Davis RJ. cPLA2 is phosphorylated and activated by MAP kinase. Cell 1993; 72: 269-78.
34. Kuriki H, Tamiya-Koizumi K, Asano M etal. Existence of phosphoinositide -specific phospholipase C in rat liver nuclei and its change during liver regeneration. J Biochem 1992; 111: 283-6.
35. Lu B, Jiang YJ, Zhou Y, Xu FY, Hatch GM, Choy PC. Cloning and characterization of murine 1-acyl-sn-glycerol 3-phosphate acyltransferases and their regulation by PPARalpha in murine heart. Biochem J 2005; 385: 469-77.
36. Zivna H, Zivny P, Palicka V et al. Influence of high cholesterol diet and pravastatin sodium on the initiation of liver regeneration in rats after partial hepatectomy. Nutrition 2002; 18: 51-5.
37. Albi E, Peloso I, Magni MV. Nuclear membrane sphingomyelin-cholesterol changes in rat liver after hepatectomy. Biochem Biophys Res Commun 1999; 262: 692-5.
38. Kojima Y, Fukumoto S, Furukawa K etal. Molecular cloning of globotriaosylceramide/CD77 synthase, a glycosyltransferase that initiates the synthesis of globo series glycosphingolipids. J Biol Chem 2000; 275: 15152-6.
39. Wendeler M, Hoernschemeyer J, Hoffmann D, Kolter T, Schwarzmann G, Sandhoff K. Photoaffinity labelling of the human GM2-activator protein. Mechanistic insight into ganglioside GM2 degradation. Eur J Biochem 2004; 271: 614-27.
40. Dransfeld O, Gehrmann T, Kohrer K et al. Oligonucleotide microarray analysis of differential transporter regulation in the regenerating rat liver. Liver Int 2005; 25: 1243-58.
41. Chmielewski M, Sucajtys E, Swierczynski J, Rutkowski B, Bogusławski W. Contribution of increased HMG-CoA reductase gene expression to hypercholesterolemia in experimental chronic renal failure. Mol Cell Biochem 2003; 246: 187-91.
42. Lund EG, Guileyardo JM, Russell DW. cDNA cloning of cholesterol 24-hydroxylase, a mediator of cholesterol homeostasis in the brain. Proc Natl Acad Sci USA 1999; 96: 7238-43.
43. Houten SM. A liver revival featuring bile acids. J Hepatol 2007; 46: 539-40.
44. Kondo KH, Kai MH, Setoguchi Y et al. Cloning and expression of cDNA of human delta 4-3-oxosteroid 5 beta-reductase and substrate specificity of the expressed enzyme. Eur J Biochem 1994; 219: 357-63.
45. Baumgart E, Vanhooren JC, Fransen M et al. Molecular characterization of the human peroxisomal branched-chain acyl-CoA oxidase: CDNA cloning, chromosomal assignment, tissue distribution, and evidence for the absence of the protein in Zellweger syndrome. Proc Natl Acad Sci USA 1996; 93: 13748-53.
46. Falany CN, Johnson MR, Barnes S, Diasio RB. Glycine and taurine conjugation of bile acids by a single enzyme. Molecular cloning and expression of human liver bile acid CoA: Amino acid N-acyltransferase. J Biol Chem 1994; 269: 19375-9.
47. Lamb JG, Straub P, Tukey RH. Cloning and characterization of cDNAs encoding mouse Ugt1.6 and rabbit UGT1.6: Differential induction by 2,3,7,8-tetrachlorodibenzo-p-dioxin. Biochemistry 1994; 33: 10513-20.
48. Ishizuka M, Yoshino S, Yamamoto Y etal. Isozyme selective alterations of the expression of cytochrome P450 during regeneration of male rat liver following partial hepatectomy. Xenobiotica 1997; 27: 923-31.
49. Karabelyos C, Dobozy O, Szalai C et al. Elevated hepatic glucocorticoid receptor expression during liver regeneration in rats. Pathol Oncol Res 1999; 5: 107-9.
50. Moriyama T, Otani T, Maruo T. Expression of adrenomedullin by human granulosa lutein cells and its effect on progesterone production. Eur J Endocrinol 2000; 142: 671-6.