Mining expression-dependent modules in the human interaction network

BMC Bioinformatics

Volumn 8, Issue SUPPL. 8, 2007, Pages

  Georgii, Elisabeth ^a,b   Dietmann, Sabine ^c   Uno, Takeaki ^d   Pagel, Philipp ^c   Tsuda, Koji ^a  

^a MAX PLANCK INSTITUTE FOR BIOLOGICAL CYBERNETICS   (Germany)

^b FRIEDRICH MIESCHER LABORATORY OF THE MAX PLANCK SOCIETY   (Germany)

^c INSTITUTE OF EPIDEMIOLOGY   (Germany)

^d NATIONAL INSTITUTE OF INFORMATICS   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

HUMAN INTERACTIONS;

PROTEIN DERIVATIVE;

ACCURACY; AUTOMATION; BIOINFORMATICS; COMPUTER ANALYSIS; COMPUTER MODEL; COMPUTER NETWORK; CONFERENCE PAPER; DATA ANALYSIS; DATA MINING; HUMAN COMPUTER INTERACTION; PREDICTION; PROTEIN DETERMINATION; PROTEIN EXPRESSION;

EID: 47649110743     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-S8-S4     Document Type: Conference Paper

References (5)

1. Newman MEJ Modularity and community structure in networks PNAS 2006 103 23 8577-8582 1482622 16723398 10.1073/pnas.0601602103
2. Palla G Derenyi I Farkas I Vicsek T Uncovering the overlapping community structure of complex networks in nature and society Nature 2005 435 814-818 10.1038/nature03607 15944704
3. Su AI Wiltshire T Batalov S Lapp H Ching KA Block D Zhang J Soden R Hayakawa M Kreiman G Cooke MP Walker JR Hogenesch JB A gene atlas of the mouse and human protein-encoding transcriptomes PNAS 2004 101 16 6062-6067 395923 15075390 10.1073/pnas.0400782101
4. Jansen R Yu H Greenbaum D Kluger Y Krogan NJ Chung S Emili A Snyder M Greenblatt JF Gerstein M A Bayesian networks approach for predicting protein-protein interactions from genomic data Science 2003 302 449-453 10.1126/science.1087361 14564010
5. Bader GD Hogue CW An automated method for finding molecular complexes in large protein interaction networks BMC Bioinformatics 2003 4 2 149346 12525261 10.1186/1471-2105-4-2