-
1
-
-
38749100200
-
On the optimality of the dimensionality reduction method
-
Andoni, A., Indyk, P., Patrascu, M.: On the optimality of the dimensionality reduction method. In: Proceedings of the 47th Annual IEEE Symposium on Foundations of Computer Science, pp. 449-458 (2006)
-
(2006)
Proceedings of the 47th Annual IEEE Symposium on Foundations of Computer Science
, pp. 449-458
-
-
Andoni, A.1
Indyk, P.2
Patrascu, M.3
-
2
-
-
84948988165
-
-
Ben-Dor, A., Lancia, G., Perone, J., Ravi, R.: Banishing bias from consensus sequences. In: Hein, J., Apostolico, A. (eds.) CPM 1997. LNCS, 1264, pp. 247-261. Springer, Heidelberg (1997)
-
Ben-Dor, A., Lancia, G., Perone, J., Ravi, R.: Banishing bias from consensus sequences. In: Hein, J., Apostolico, A. (eds.) CPM 1997. LNCS, vol. 1264, pp. 247-261. Springer, Heidelberg (1997)
-
-
-
-
3
-
-
33746616844
-
Space and time efficient algorithms for planted motif search
-
Davila, J., Balla, S., Rajasekaran, S.: Space and time efficient algorithms for planted motif search. In: International Conference on Computational Science (2), pp. 822-829 (2006)
-
(2006)
International Conference on Computational Science (2)
, pp. 822-829
-
-
Davila, J.1
Balla, S.2
Rajasekaran, S.3
-
4
-
-
0141645222
-
Genetic design of drugs without side-effects
-
Deng, X., Li, G., Li, Z., Ma, B., Wang, L.: Genetic design of drugs without side-effects. SIAM Journal on Computing 32(4), 1073-1090 (2003)
-
(2003)
SIAM Journal on Computing
, vol.32
, Issue.4
, pp. 1073-1090
-
-
Deng, X.1
Li, G.2
Li, Z.3
Ma, B.4
Wang, L.5
-
5
-
-
0027263202
-
Design of primers for PCR amplification of highly variable genomes
-
Dopazo, J., Rodríguez, A., Sáiz, J.C., Sobrino, F.: Design of primers for PCR amplification of highly variable genomes. CABIOS 9, 123-125 (1993)
-
(1993)
CABIOS
, vol.9
, pp. 123-125
-
-
Dopazo, J.1
Rodríguez, A.2
Sáiz, J.C.3
Sobrino, F.4
-
7
-
-
35248887084
-
-
Evans, P.A., Smith, A.D.: Complexity of approximating closest substring problems. In: Lingas, A., Nilsson, B.J. (eds.) FCT 2003. LNCS, 2751, pp. 210-221. Springer, Heidelberg (2003)
-
Evans, P.A., Smith, A.D.: Complexity of approximating closest substring problems. In: Lingas, A., Nilsson, B.J. (eds.) FCT 2003. LNCS, vol. 2751, pp. 210-221. Springer, Heidelberg (2003)
-
-
-
-
8
-
-
0042890585
-
On the complexity of finding common approximate substrings
-
Evans, P.A., Smith, A.D., Wareham, H.T.: On the complexity of finding common approximate substrings. Theoretical Computer Science 306(1-3), 407-430 (2003)
-
(2003)
Theoretical Computer Science
, vol.306
, Issue.1-3
, pp. 407-430
-
-
Evans, P.A.1
Smith, A.D.2
Wareham, H.T.3
-
9
-
-
33749345269
-
On the parameterized intractability of motif search problems
-
Fellows, M.R., Gramm, J., Niedermeier, R.: On the parameterized intractability of motif search problems. Combinatorica 26(2), 141-167 (2006)
-
(2006)
Combinatorica
, vol.26
, Issue.2
, pp. 141-167
-
-
Fellows, M.R.1
Gramm, J.2
Niedermeier, R.3
-
11
-
-
21144456083
-
-
Gramm, J., Guo, J., Niedermeier, R.: On exact and approximation algorithms for distinguishing substring selection. In: Lingas, A., Nilsson, B.J. (eds.) FCT 2003. LNCS, 2751, pp. 159-209. Springer, Heidelberg (2003)
-
Gramm, J., Guo, J., Niedermeier, R.: On exact and approximation algorithms for distinguishing substring selection. In: Lingas, A., Nilsson, B.J. (eds.) FCT 2003. LNCS, vol. 2751, pp. 159-209. Springer, Heidelberg (2003)
-
-
-
-
12
-
-
47249098541
-
Closest strings, primer design, and motif search
-
Florea, L, et al, eds
-
Gramm, J., Hüffner, F., Niedermeier, R.: Closest strings, primer design, and motif search. In: Florea, L., et al. (eds.) Currents in Computational Molecular Biology, poster abstracts of RECOMB 2002, pp. 74-75 (2002)
-
(2002)
Currents in Computational Molecular Biology, poster abstracts of RECOMB
, pp. 74-75
-
-
Gramm, J.1
Hüffner, F.2
Niedermeier, R.3
-
13
-
-
0942268510
-
Fixed-parameter algorithms for closest string and related problems
-
Gramm, J., Niedermeier, R., Rossmanith, P.: Fixed-parameter algorithms for closest string and related problems. Algorithmica 37, 25-42 (2003)
-
(2003)
Algorithmica
, vol.37
, pp. 25-42
-
-
Gramm, J.1
Niedermeier, R.2
Rossmanith, P.3
-
15
-
-
35048870115
-
-
Jiao, Y., Xu, J., Li, M.: On the k-closest substring and k-consensus pattern problems. In: Sahinalp, S.C., Muthukrishnan, S.M., Dogrusoz, U. (eds.) CPM 2004. LNCS, 3109, pp. 130-144. Springer, Heidelberg (2004)
-
Jiao, Y., Xu, J., Li, M.: On the k-closest substring and k-consensus pattern problems. In: Sahinalp, S.C., Muthukrishnan, S.M., Dogrusoz, U. (eds.) CPM 2004. LNCS, vol. 3109, pp. 130-144. Springer, Heidelberg (2004)
-
-
-
-
16
-
-
0032761227
-
Distinguishing string search problems
-
SODA, pp
-
Lanctot, K., Li, M., Ma, B., Wang, S., Zhang, L.: Distinguishing string search problems. In: Proceedings of the 10th Annual ACM-SIAM Symposium on Discrete Algorithms (SODA), pp. 633-642 (1999)
-
(1999)
Proceedings of the 10th Annual ACM-SIAM Symposium on Discrete Algorithms
, pp. 633-642
-
-
Lanctot, K.1
Li, M.2
Ma, B.3
Wang, S.4
Zhang, L.5
-
17
-
-
0032654634
-
Finding similar regions in many strings
-
Li, M., Ma, B., Wang, L.: Finding similar regions in many strings. In: Proceedings of the 31st ACM Symposium on Theory of Computing, pp. 473-482 (1999)
-
(1999)
Proceedings of the 31st ACM Symposium on Theory of Computing
, pp. 473-482
-
-
Li, M.1
Ma, B.2
Wang, L.3
-
18
-
-
0141653290
-
On the closest string and substring problems
-
Li, M., Ma, B., Wang, L.: On the closest string and substring problems. Journal of the ACM 49(2), 157-171 (2002)
-
(2002)
Journal of the ACM
, vol.49
, Issue.2
, pp. 157-171
-
-
Li, M.1
Ma, B.2
Wang, L.3
-
19
-
-
26944445774
-
-
Liu, X., He, H., Sýkora, O.: Parallel genetic algorithm and parallel simulated annealing algorithm for the closest string problem. In: Li, X., Wang, S., Dong, Z.Y. (eds.) ADMA 2005. LNCS (LNAI), 3584, pp. 591-597. Springer, Heidelberg (2005)
-
Liu, X., He, H., Sýkora, O.: Parallel genetic algorithm and parallel simulated annealing algorithm for the closest string problem. In: Li, X., Wang, S., Dong, Z.Y. (eds.) ADMA 2005. LNCS (LNAI), vol. 3584, pp. 591-597. Springer, Heidelberg (2005)
-
-
-
-
20
-
-
0026056502
-
An improved microcomputer program for finding gene- or gene family-specific oligonucleotides suitable as primers for polymerase chain reactions or as probes
-
Lucas, K., Busch, M., MÖssinger, S., Thompson, J.A.: An improved microcomputer program for finding gene- or gene family-specific oligonucleotides suitable as primers for polymerase chain reactions or as probes. CABIOS 7, 525-529 (1991)
-
(1991)
CABIOS
, vol.7
, pp. 525-529
-
-
Lucas, K.1
Busch, M.2
MÖssinger, S.3
Thompson, J.A.4
-
23
-
-
15944400683
-
Genetic algorithm approach for the closest string problem
-
Mauch, H., Melzer, M.J., Hu, J.S.: Genetic algorithm approach for the closest string problem. In: Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference (CSB), pp. 560-561 (2003)
-
(2003)
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference (CSB)
, pp. 560-561
-
-
Mauch, H.1
Melzer, M.J.2
Hu, J.S.3
-
24
-
-
85149600984
-
-
INFORMS Journal on Computing
-
Meneses, C.N., Lu, Z., Oliveira, C.A.S., Pardalos, P.M.: Optimal solutions for the closest-string problem via integer programming. INFORMS Journal on Computing (2004)
-
(2004)
Optimal solutions for the closest-string problem via integer programming
-
-
Meneses, C.N.1
Lu, Z.2
Oliveira, C.A.S.3
Pardalos, P.M.4
-
25
-
-
4544278737
-
Hard problems in similarity searching
-
Moan, C., Rusu, I.: Hard problems in similarity searching. Discrete Applied Mathematics 144, 213-227 (2004)
-
(2004)
Discrete Applied Mathematics
, vol.144
, pp. 213-227
-
-
Moan, C.1
Rusu, I.2
-
27
-
-
0029855834
-
Primer master: A new program for the design and analysis of PCR primers
-
Proutski, V., Holme, E.C.: Primer master: A new program for the design and analysis of PCR primers. CABIOS 12, 253-255 (1996)
-
(1996)
CABIOS
, vol.12
, pp. 253-255
-
-
Proutski, V.1
Holme, E.C.2
-
28
-
-
0000435276
-
Probabilistic construction of deterministic algorithms: Approximating packing integer program
-
Raghavan, P.: Probabilistic construction of deterministic algorithms: Approximating packing integer program. Journal of Computer and System Sciences 37, 130-143 (1988)
-
(1988)
Journal of Computer and System Sciences
, vol.37
, pp. 130-143
-
-
Raghavan, P.1
-
29
-
-
84947918812
-
A linear-time algorithm for the 1-mismatch problem
-
Stojanovic, N., Berman, P., Gumucio, D., Hardison, R., Miller, W.: A linear-time algorithm for the 1-mismatch problem. In: Proceedings of the 5th International Workshop on Algorithms and Data Structures, pp. 126-135 (1997)
-
(1997)
Proceedings of the 5th International Workshop on Algorithms and Data Structures
, pp. 126-135
-
-
Stojanovic, N.1
Berman, P.2
Gumucio, D.3
Hardison, R.4
Miller, W.5
-
31
-
-
33947385831
-
Degenerated primer design to amplify the heavy chain variable region from immunoglobulin cDNA
-
S
-
Wang, Y., Chen, W., Li, X., Cheng, B.: Degenerated primer design to amplify the heavy chain variable region from immunoglobulin cDNA. BMC Bioinformatics 7(suppl. 4), S9 (2006)
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 4
, pp. 9
-
-
Wang, Y.1
Chen, W.2
Li, X.3
Cheng, B.4
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