메뉴 건너뛰기




Volumn 4, Issue 4, 2008, Pages 430-433

A coalescent framework for comparing alternative models of population structure with genetic data: Evolution of Celebes toads

Author keywords

Coalescence; Demography; Rejection sampling

Indexed keywords

CELL NUCLEUS DNA; MITOCHONDRIAL DNA;

EID: 46949107195     PISSN: 17449561     EISSN: 1744957X     Source Type: Journal    
DOI: 10.1098/rsbl.2008.0166     Document Type: Article
Times cited : (26)

References (19)
  • 1
    • 0036964474 scopus 로고    scopus 로고
    • Approximate Bayesian computation in population genetics
    • Beaumont, M. A., Zhang, W. & Balding, D. J. 2002 Approximate Bayesian computation in population genetics. Genetics 162, 2025-2035.
    • (2002) Genetics , vol.162 , pp. 2025-2035
    • Beaumont, M.A.1    Zhang, W.2    Balding, D.J.3
  • 2
    • 3042575858 scopus 로고    scopus 로고
    • Habitat fragmentation and biodiversity: Testing for the evolutionary effects of refugia
    • doi:10.1111/j.0014-3820.2004.tb01718.x
    • Bridle, J. R., Pedro, P. M. & Butlin, R. K. 2004 Habitat fragmentation and biodiversity: testing for the evolutionary effects of refugia. Evolution 58, 1394-1396. (doi:10.1111/j.0014-3820.2004.tb01718.x)
    • (2004) Evolution , vol.58 , pp. 1394-1396
    • Bridle, J.R.1    Pedro, P.M.2    Butlin, R.K.3
  • 3
    • 2942571539 scopus 로고    scopus 로고
    • The comparative RNA web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
    • doi:10.1186/1471- 2105-3-2
    • Cannone, J. J. et al. 2002 The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinform. 3, 2. (doi:10.1186/1471- 2105-3-2)
    • (2002) BMC Bioinform , vol.3 , pp. 2
    • Cannone, J.J.1
  • 4
    • 1642446520 scopus 로고    scopus 로고
    • Phylogenetics of fanged frogs (Anura; Ranidae; Limnonectes): Testing biogeographical hypotheses at the Asian-Australian faunal zone interface
    • doi:10.1080/ 10635150390251063
    • Evans, B. J., Brown, R. M., McGuire, J. A., Supriatna, J., Andayani, N., Diesmos, A., Iskandar, D. T., Melnick, D. J. & Cannatella, D. C. 2003a Phylogenetics of fanged frogs (Anura; Ranidae; Limnonectes): testing biogeographical hypotheses at the Asian-Australian faunal zone interface. Syst. Biol. 52, 794-819. (doi:10.1080/ 10635150390251063)
    • (2003) Syst. Biol , vol.52 , pp. 794-819
    • Evans, B.J.1    Brown, R.M.2    McGuire, J.A.3    Supriatna, J.4    Andayani, N.5    Diesmos, A.6    Iskandar, D.T.7    Melnick, D.J.8    Cannatella, D.C.9
  • 5
    • 0041783471 scopus 로고    scopus 로고
    • Diversification of Sulawesi macaque monkeys: Decoupled evolution of mitochondrial and autosomal DNA
    • doi:10.1111/j.0014-3820.2003.tb00599.x
    • Evans, B. J., Supriatna, J., Andayani, N. & Melnick, D. J. 2003b Diversification of Sulawesi macaque monkeys: decoupled evolution of mitochondrial and autosomal DNA. Evolution 57, 1931-1946. (doi:10.1111/j.0014-3820.2003.tb00599.x)
    • (2003) Evolution , vol.57 , pp. 1931-1946
    • Evans, B.J.1    Supriatna, J.2    Andayani, N.3    Melnick, D.J.4
  • 6
    • 0038641057 scopus 로고    scopus 로고
    • Monkeys and toads define areas of endemism on Sulawesi
    • doi:10.1111/j.0014-3820. 2003.tb00350.x
    • Evans, B. J., Supriatna, J., Andayani, N., Setiadi, M. I., Cannatella, D. C. & Melnick, D. J. 2003c Monkeys and toads define areas of endemism on Sulawesi. Evolution 57, 1436-1443. (doi:10.1111/j.0014-3820. 2003.tb00350.x)
    • (2003) Evolution , vol.57 , pp. 1436-1443
    • Evans, B.J.1    Supriatna, J.2    Andayani, N.3    Setiadi, M.I.4    Cannatella, D.C.5    Melnick, D.J.6
  • 7
    • 16644375376 scopus 로고    scopus 로고
    • Partial island submergence and speciation in an adaptive radiation: A multilocus analysis of the Cuban green anoles
    • doi:10.1098/rspb.2004. 2819
    • Glor, R. E., Gifford, M. E., Larson, A., Losos, J. B., Schettino, L. R., Lara, A. R. C. & Jackman, T. R. 2004 Partial island submergence and speciation in an adaptive radiation: a multilocus analysis of the Cuban green anoles. Proc. R. Soc. B 271, 2257-2265. (doi:10.1098/rspb.2004. 2819)
    • (2004) Proc. R. Soc. B , vol.271 , pp. 2257-2265
    • Glor, R.E.1    Gifford, M.E.2    Larson, A.3    Losos, J.B.4    Schettino, L.R.5    Lara, A.R.C.6    Jackman, T.R.7
  • 8
    • 0027526039 scopus 로고
    • Statistical tests of models of DNA substitution
    • doi:10.1007/BF00166252
    • Goldman, N. 1993 Statistical tests of models of DNA substitution. J. Mol. Evol. 36, 182-198. (doi:10.1007/BF00166252)
    • (1993) J. Mol. Evol , vol.36 , pp. 182-198
    • Goldman, N.1
  • 9
    • 0034079389 scopus 로고    scopus 로고
    • Statistical tests of gamma-distributed rate heterogeneity in models of sequence evolution in phylogenetics
    • Goldman, N. & Whelan, S. 2000 Statistical tests of gamma-distributed rate heterogeneity in models of sequence evolution in phylogenetics. Mol. Biol. Evol. 17, 975-978.
    • (2000) Mol. Biol. Evol , vol.17 , pp. 975-978
    • Goldman, N.1    Whelan, S.2
  • 10
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • doi:10.1093/bioinformatics/18.2.337
    • Hudson, R. R. 2002 Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18, 337-338. (doi:10.1093/bioinformatics/18.2.337)
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 11
    • 0026709389 scopus 로고
    • Estimation of levels of gene flow from DNA sequence data
    • Hudson, R. R., Slatkin, M. & Maddison, W. P. 1992 Estimation of levels of gene flow from DNA sequence data. Genetics 132, 583-589.
    • (1992) Genetics , vol.132 , pp. 583-589
    • Hudson, R.R.1    Slatkin, M.2    Maddison, W.P.3
  • 12
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • doi:10.1093/bioinformatics/17.8.754
    • Huelsenbeck, J. P. & Ronquist, F. 2001 MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755. (doi:10.1093/bioinformatics/17.8.754)
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 13
    • 37249005725 scopus 로고    scopus 로고
    • Two waves of diversification in mammals and reptiles of Baja California revealed by hierarchical Bayesian analysis
    • doi:10.1098/rsbl.2007.0368
    • Leaché, A., Crews, S. C. & Hickerson, M. J. 2007 Two waves of diversification in mammals and reptiles of Baja California revealed by hierarchical Bayesian analysis. Biol. Lett. 3, 646-650. (doi:10.1098/rsbl.2007.0368)
    • (2007) Biol. Lett , vol.3 , pp. 646-650
    • Leaché, A.1    Crews, S.C.2    Hickerson, M.J.3
  • 14
    • 38349008684 scopus 로고    scopus 로고
    • McGuire, J. A., Brown, R. M., Mumpuni, Riyanto, A. & Andayani, N. 2007 The flying lizards of the Draco lineatus group (Squamata: Iguania: Agamidae): a taxonomic revision with descriptions of two new species. Herpetol. Monogr. 21, 179-212. (doi:10.1655/07-012.1)
    • McGuire, J. A., Brown, R. M., Mumpuni, Riyanto, A. & Andayani, N. 2007 The flying lizards of the Draco lineatus group (Squamata: Iguania: Agamidae): a taxonomic revision with descriptions of two new species. Herpetol. Monogr. 21, 179-212. (doi:10.1655/07-012.1)
  • 15
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • Rousset, F. 1997 Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145, 1219-1228.
    • (1997) Genetics , vol.145 , pp. 1219-1228
    • Rousset, F.1
  • 16
    • 0347513220 scopus 로고    scopus 로고
    • DNASP, DNA polymorphism analyses by the coalescent and other methods
    • doi:10.1093/bioinformatics/btg359
    • Rozas, J., Sanchez-DelBarrio, J. C., Messegyer, X. & Rozas, R. 2003 DNASP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19, 2496-2497. (doi:10.1093/bioinformatics/btg359)
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sanchez-DelBarrio, J.C.2    Messegyer, X.3    Rozas, R.4
  • 17
    • 84907319426 scopus 로고
    • Asymptotic properties of maximum likelihood estimators and likelihood ratio tests under nonstandard conditions
    • doi:10.2307/2289471
    • Self, S. G. & Liang, K.-Y. 1987 Asymptotic properties of maximum likelihood estimators and likelihood ratio tests under nonstandard conditions. J. Am. Stat. Assoc. 82, 605-610. (doi:10.2307/2289471)
    • (1987) J. Am. Stat. Assoc , vol.82 , pp. 605-610
    • Self, S.G.1    Liang, K.-Y.2
  • 18
    • 0031827528 scopus 로고    scopus 로고
    • Inference of population history using a likelihood approach
    • Weiss, G. & von Haeseler, A. 1998 Inference of population history using a likelihood approach. Genetics 149, 1539-1546.
    • (1998) Genetics , vol.149 , pp. 1539-1546
    • Weiss, G.1    von Haeseler, A.2
  • 19
    • 11244270363 scopus 로고    scopus 로고
    • A separation-of-timescales approach to the coalescent in a continuous population
    • doi:10.1534/genetics.103.022830
    • Wilkins, J. F. 2004 A separation-of-timescales approach to the coalescent in a continuous population. Genetics 168, 2227-2244. (doi:10.1534/genetics.103.022830)
    • (2004) Genetics , vol.168 , pp. 2227-2244
    • Wilkins, J.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.