Circumpolar genetic population structure of capelin Mallotus villosus

Marine Ecology Progress Series

Volumn 360, Issue , 2008, Pages 187-199

  Praebel K ^a   Westgaard, J I ^a   Fevolden, S E ^a   Christiansen, J S ^a  

^a UNIVERSITY OF TROMSØ   (Norway)

Author keywords

Genetic differentiation; Mallotus villosus; Microsatellite markers; Population structure

Indexed keywords

DISPERSAL; GENETIC DIFFERENTIATION; GENETIC STRUCTURE; GENOTYPE; POPULATION DYNAMICS; POPULATION GENETICS; POPULATION STRUCTURE; TELEOST;

ARCTIC; ATLANTIC OCEAN; ATLANTIC OCEAN (NORTHEAST); CANADA; GREENLAND; NEWFOUNDLAND; NEWFOUNDLAND AND LABRADOR; NORTH AMERICA; PACIFIC OCEAN; PACIFIC OCEAN (EAST); WEST GREENLAND;

MALLOTUS (FISH); MALLOTUS VILLOSUS;

EID: 46949102217     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps07363     Document Type: Article

References (50)

1. Almeida FC, Maroja LS, Moreira MAM, Seuánez HN, Cerqueira R (2005) Population structure and genetic variability of mainland and insular populations of the Neotropical water rat, Nectomys squamipes (Rodentia, Sigmodontinae). Genet Mol Biol 28:693-699
2. Arbogast BS, Edwards SV, Wakeley J, Beerli P, Slowinski JB (2002) Estimating divergence times from molecular data on phylogenetic and population genetic timescales. Annu Rev Ecol Syst 33:707-740
3. Behrens JW, Præbel K, Steffensen JF (2006) Swimming energetics of the Barents Sea capelin (Mallotus villosus) during the spawning migration period. J Exp Mar Biol Ecol 331: 208-216
4. Birt TP, Friesen VL, Birt RD, Green JM, Davidson WS (1995) Mitochondrial DNA variation in Atlantic capelin, Mallotus villosus: a comparison of restriction and sequence analyses. Mol Ecol 4:771-776
5. Brodeur RD, Wilson MT, Walters GE, Melnikov IV (1999) Forage fishes of the Bering Sea: distribution, species associations, and biomass trends. In: Loughlin TR, Ohtani K (eds) Dynamics of the Bering Sea. University of Alaska Sea grant college program, Report 99-03, p 509-536
6. Brown ED (2002) Life history, distribution, and size structure of Pacific capelin in Prince William Sound and the northem Gulf of Alaska. ICES J Mar Sci 59:983-996
7. Carscadden JE, Vilhjálmsson H (2002) Capelin - what are they good for? ICES J Mar Sci 59:863-869
8. Carscadden JE, Frank KT, Miller DS (1989) Capelin (Mallotus villosus) spawning on the southeast shoal: influence of physical factors past and present. Can J Fish Aquat Sci 46:1743-1754
9. Christiansen JS, Siikavuopio SI (1998) Survival and growth of post-spawning capelin (Mallotus villosus) - an introductory report from a laboratory study. ICES CM 1988/CC
10. Conover DO, Clarke LM, Munch SB, Wagner GN (2006) Spatial and temporal scales of adaptive divergence in marine fishes and the implication for conservation. J Fish Biol 69:21-47
11. Dodson JJ, Carscadden JE, Bernatchez L, Colombani F (1991) Relationship between spawning mode and phylogeographic structure in mitochondrial DNA of North Atlantic capelin Mallotus villosus. Mar Ecol Prog Ser 76:103-113
12. Drengstig A, Fevolden SE, Galand PE, Aschan MM (2000) Population structure of the deep-sea shrimp (Pandalus borealis) in the North-East Atlantic based on allozyme variation. Aquat Living Resour 13:121-128
13. Dunbar MJ (1983) A unique international polar year contribution: Lucien Turner, capelin and climatic change. Arctic 36:204-205
14. Dupanloup I, Schneider S, Excoffier L (2002) A simulated annealing approach to define the genetic structure of populations. Mol Ecol 11:2571-2581
15. Excoffier L, Laval G, Schneider S (2005) Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47-50
16. Fevolden SE, Pogson GH (1997) Genetic divergence at the synaptophysin (syp I) locus among Norwegian costal and North-East Arctic populations of Atlantic cod, Gadus morhua. J Fish Biol 51:895-908
17. Friis-Rødel E, Kanneworff P (2002) A review of capelin (Mallotus villosus) in Greenland waters. ICES J Mar Sci 59:890-896
18. Galand PE, Fevolden SE (2000) Population structure of Chlamys islandica in the Northeast Atlantic - northern stocks compared with a southern relict population. Sarsia 85:183-188
19. Gilbert-Horvath EA, Larson RJ, Garza JC (2006) Temporal recruitment patterns and geneflow in kelp rock fish (Sebastes atrovirens). Mol Ecol 15:3801-3815
20. Gjøsæter H (1998) The population biology and exploitation of capelin (Mallotus villosus) in the Barents Sea. Sarsia 83: 453-496
21. Gordos K, Kenchington EL, Hamilton LC, Nakashima BS, Taggart CT (2005) Atlantic capelin (Mallotus villosus) tetranucleotide microsatellites. Mol Ecol Notes 5:220-222
22. Hardy OJ, Vekemans X (2002) SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Mol Ecol Notes 2:618-620
23. Kalinowski ST (2005) HP-RARE 1.0: a computer program for performing rarefaction on measures of allelic richness. Mol Ecol Notes 5:187-189
24. Manni F, Guerard E, Heyer E (2004) Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by using Monmonier's algorithm. Human Biol 76:173-190
25. Martinez I, Aschan M, Skjerdal T, Aljanabi SM (2006) The genetic structure of Pandalus borealis in the Northeast Atlantic determined by RAPD analysis. ICES J Mar Sci 63:840-850
26. Mork J, Friis-Sörensen E (1983) Genetic variation in capelin Mallotus villosus from Norwegian waters. Mar Ecol Prog Ser 12:199-205
27. Naumenko EA (1996) Distribution, biology, condition and abundance of capelin (Mallotus villosus socialis) in the Bering Sea. In: Mathisen OA, Coyle KO (eds) Ecology of the Bering Sea: a review of Russian literature. University of Alaska Sea grant college program, Report 96-01, p 237-256
28. Nielsen EE, Hansen MM, Schmidt C, Meldrup D, Grønkjaer P (2001) Fisheries: population origin of Atlantic cod. Nature 413:272
29. O'Leary DB, Coughlan J, Dillane E, McCarthy TV, Cross TF (2007) Microsatellite variation in cod Gadus morhua throughout its geographical range. J Fish Biol 70:310-335
30. Paetkau D, Slade R, Burden M, Estoup A (2004) Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power. Mol Ecol 13:55-65
31. Payne RH (1976) Further studies on the biochemical population genetics of the capelin, Mallotus villosus: demonstration that the capelin populations of West Greenland and eastern North America are genetically distinct. CM 1976 H 24
32. Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, Estoup A (2004) GENECLASS2: a software for genetic assignment and first-generation migrant detection. J Hered 95:536-539
33. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959
34. Pulquério MJF, Nichols RA (2007) Dates from the molecular clock: How wrong can we be? Trends Ecol Evol 22:180-184
35. Raymond M, Rousset F (1995) Genepop (Version-1.2) - Population-genetics software for exact tests and ecumenicism. J Hered 86:248-249
36. Rice WR (1989) Analyzing tables of statistical tests. Evolution 43:223-225
37. Roby D, Lambert JD, Sevigny JM (1991) Morphometric and electrophoretic approaches to discrimination of capelin (Mallotus villosus) populations in the Estuary and Gulf of St-Lawrence. Can J Fish Aquat Sci 48:2040-2050
38. Røed KH, Fevolden SE, Christiansen JS, Midthjell L (2003) Isolation and characterization of DNA microsatellites for capelin Mallotus villosus population genetic studies. Mar Ecol Prog Ser 262:299-303
39. Ryman N, Palm S (2006) POWSIM: a computer program for assessing statistical power when testing for genetic differentiation. Mol Ecol 6:600-602
40. Sønstebø JH, Borgstrom R, Heun M (2007) Genetic structure of brown trout (Salmo trutta L.) from the Hardangervidda mountain plateau (Norway) analyzed by microsatellite DNA: a basis for conservation guidelines. Conserv Genet 8:33-44
41. Sørensen EF, Simonsen V (1988) Genetic differentiation among populations of capelin Mallotus villosus from the west-coast of Greenland. J Appl Ichthyology 4:23-28
42. Stergiou KI (1989) Capelin Mallotus villosus (Pisces: Osmeridae), glaciations, and speciation: a nomothetic approach to fisheries ecology and reproductive biology. Mar Ecol Prog Ser 56:211-224
43. Sunnucks P (2000) Efficient genetic markers for population biology. Trends Ecol Evol 15:199-203
44. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535-538
45. Velikanov AY (2002) Spatial differences in reproduction of capelin (Mallotus villosus socialis) in the coastal waters of Sakhalin. ICES J Mar Sci 59:1011-1017
46. Vilhjálmsson H (2002) Capelin (Mallotus villosus) in the Iceland-East Greenland-Jan Mayen ecosystem. ICES J Mar Sci 59:870-883
47. Wassmann P, Reigstad M, Haug T, Rudels B and others (2006) Food webs and the carbon flux in the Barents Sea. Prog Oceanogr 71:232-287
48. Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population-structure. Evolution 38:1358-1370
49. Westgaard JI, Fevolden SE (2007) Atlantic cod (Gadus morhua L.) in inner and outer coastal zones of northern Norway display divergent genetic signature at non-neutral loci. Fish Res 85:306-315
50. Xu W, Jameson D, Tang B, Higgs PG (2006) The relationship between the rate of molecular evolution and the rate of genome rearrangement in animal mitochondrial genomes. J Mol Evol 63:375-392