Research on the proteome response of Acidithiobacillus ferrooxidans to phosphate starvation by SELDI-protein chip technologies

Progress in Biochemistry and Biophysics

Volumn 35, Issue 1, 2008, Pages 77-84

  He, Zhi Guo ^a   Zhong, Hui ^a   Li, Qing Hua ^a   Gu, Guo Hua ^a   Hu, Yue Hua ^a   Li, Gui Yuan ^a  

^a CENTRAL SOUTH UNIVERSITY   (China)

Author keywords

Acidithiobacillus ferrooxidans; Phosphate starvation; Proteomics; SELDI protein chip

Indexed keywords

ACIDITHIOBACILLUS FERROOXIDANS; BACTERIA (MICROORGANISMS);

EID: 46849087588     PISSN: 10003282     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (27)

1. Rojas-Chapana J A, Giersig M, Tributsch H. Sulphur colloids as temporary energy reservoirs for Thiobacillus ferrooxidans during pyrite oxidation.Arch Microbiol, 1995, 163(13): 352-356
2. Rojas-Chapana J A, Giersig M, Tributsch H. The path of sulfur during the bio-oxidation of pyrite by Thiobacillus ferooxidans. Fuel, 1996, 75(8): 923-930
3. Tributsch H, Rojas-Chapana J A, Bartels C C, et al. Role of transient iron sulfide films in microbial corrosion of steel. Corrosion, 1998, 54(3): 216-227
4. Issaq H J, Veenstra T D, Conrads T P, et al. The SELDI-TOF MS approach to proteomics: protein profiling and biomarker identification. Biochem Biophys Res Comm, 2002, 292 (3-5): 587-592
5. Fung E T, Thulasiraman V, Weinberger S R. Protein biochips for differential profiling. Curr Opin Biotechnol, 2001, 12 (1,1): 65-69
6. Fung E T, Enderwick C. ProteinChip clinical proteomics: computational challenges and solutions. Computational Proteomics Supplement, 2002, 32 (3): S34-S41
7. Amaro A M, Chamorro D, Seeger M, et al. Effect of external pH perturbations on in vivo protein synthesis by the acidophilic bacterium Thiobacillus ferrooxidans. J Bacteriol, 1999, 173 (2): 910-915
8. Schippers A, Rohwerder T, Sand W. Intermediary sulfur compounds in pyrite oxidation: implications for bioleaching and biodepyritization of coal. Appl Microbiol Biotechnol, 1999, 52 (1): 104-110
9. Hodgetts A, Bossé J T, Kroll J S, Langford P R. Analysis of differential protein expression in Actinobacillus pleuropneumoniae by surface enhanced laser desorption ionisation-ProteinChip (SELDI) technology. Vet Microbiol, 2004, 99 (3-4): 215-225
10. Guiliani N, Jerez C A. Molecular cloning, sequencing, and expression of omp-40, the gene coding for the major outer membrane protein from the acidophilic bacterium Thiobacillus ferrooxidans. Appl Environ Microbiol, 2000, 66 (6): 2318-2324
11. Jerez C A, Seeger M, Amaro A M. Phosphate starvation affects the synthesis of outer membrane proteins in Thiobacillus ferrooxidans. FEMS Microbiol Lett, 1992, 77 (1-3): 29-33
12. Vera M, Guiliani N, Jerez C A. Proteomic and genomic analysis of the phosphate starvation response of Acidithiobacillus ferrooxidans. Hydrometallurgy, 2003, 71 (1): 125-132
13. Sauter E R, Zhu W, Fan X, et al. Proteomic analysis of nipple aspirate fluid to detect biologic markers of breast cancer. Br J Cancer, 2002, 86 (9): 1440-1443
14. Liotta L A, Petricoin E F, Ardekani A M, Hitt B A. General keynote: proteomic patterns in sera serve as biomarkers of ovarian cancer. Gynecol Oncol, 2003, 88 (1 Pt 2): S25-28
15. Zhukov T A, Johanson R A, Cantor A B, et al. Discovery of distinct protein profiles specific for lung tumors and pre-malignant lung lesions by SELDI mass spectrometry. Lung Cancer, 2003, 40 (3): 267-279
16. Carrette O, Demalte I, Scherl A, et al. A panel of cerebrospinal fluid potential biomarkers for the diagnosis of Alz heimer's disease. Proteomics, 2003, 3 (8): 1486-1494
17. Pitcher R S, Cheesman M R, Watmough N J. Molecular and spectroscopic analysis of the cytochrome cbb3 oxidase from pseudomonas stutzeri. J Biol Chem, 2002, 277 (35): 31474-31483
18. Reid G, Gan B S, She Y, et al. Rapid identification of probiotic lactobacillus biosurfactant proteins by proteinChip tandem mass spectrometry tryptic peptide sequencing. Appl Environ Microbiol, 2002, 68 (2): 977-980
19. Mandrich L, Caputo E, Martin BM, et al. The Aes protein and the monomeric alpha-galactosidase from Escherichia coli form a non-covalent complex. Implications for the regulation of carbohydrate metabolism. J Biol Chem, 2002, 277 (50): 48241-48247
20. R from Streptomyces coelicolor J Mol Biol, 2002, 323 (2): 225-236
21. Howard J C, Heinemann C, Thatcher B J, et al. Identification of collagen-binding proteins in Lactobacillus spp. with surface-enhanced laser desorption/ionization-time of flight ProteinChip technology. Appl Environ Microbio, 2000, 66 (10): 4396-4400
22. Hynes S O, McGuire J, Falt T, et al. T. Short communication the rapid detection of low molecular mass proteins differentially expressed under biological stress for four Helicobacter spp. using ProteinChip® technology. Proteomics, 2003, 3(3): 273-278
23. Hynes S O, McGuire J, Wadstrom T. Potential for proteomic profiling of Helicobacter pylori and other Helicobacter spp. using a ProteinChip array. FEMS Immunol Med Microbiol, 2003, 36(3): 151-158
24. Boyle M D, Romer T G, Meeker A K, Sledjeski D D. Use of surface-enhanced laser desorption ionization protein chip system to analyze streptococcal exotoxin B activity secreted by Streptococcus pyogenes. J Microbiol Methods, 2001, 46 (2): 87-97
25. Romer T G, Boyle M D P. Application of immunoproteomics to analysis of post-translational processing of the antiphagocytic M protein of Streptococcus. Proteomics, 2003, 3 (1): 29-35
26. Thulasiraman V, McCutchen-Maloney S L, Motin V L, Garcia E. Detection and identification of virulence factors in Yersinia pestis using SELDI ProteinChip system. Biotechniques, 2001, 30 (2): 428-432
27. Barzaghi D , Isbister J D, Lauer K P, Born T L. Use of surface-enhanced laser desorption/ionization -time of flight to explore bacterial proteomes. Proteomics, 2004, 4 (9): 2624-2628