Analysis of natural recombination in porcine endogenous retrovirus envelope genes

Journal of Microbiology and Biotechnology

Volumn 18, Issue 3, 2008, Pages 585-590

  Lee, Donghee ^a   Lee, Jungeun ^a   Park, Nuri ^a   Oh, Yu Kyung ^b   Kwon, Moosik ^c   Kim, Young Bong ^a  

^a Konkuk University   (South Korea)

^b Korea University   (South Korea)

^c Sungkyunkwan University   (South Korea)

Author keywords

Envelope; Natural recombination; Pig; Porcine endogenous retrovirus; Xenotransplantation

Indexed keywords

ENVELOPE PROTEIN; GENOMIC DNA; VIRUS ENVELOPE PROTEIN;

ARTICLE; CONTROLLED STUDY; ENDOGENOUS RETROVIRUS; GENE FREQUENCY; GENE IDENTIFICATION; GENETIC RECOMBINATION; GENOME ANALYSIS; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; RECOMBINANT GENE; SEQUENCE ANALYSIS; SWINE; VIRUS INFECTIVITY; VIRUS RECOMBINANT; XENOTRANSPLANTATION; ZOONOSIS; AMINO ACID SEQUENCE; ANIMAL; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETICS; GLYCOSYLATION; HUMAN; ISOLATION AND PURIFICATION; KOREA; METABOLISM; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE ALIGNMENT; VIROLOGY;

PORCINE ENDOGENOUS RETROVIRUS; SUIDAE;

AMINO ACID SEQUENCE; ANIMALS; CLONING, MOLECULAR; ENDOGENOUS RETROVIRUSES; GLYCOSYLATION; HUMANS; KOREA; MOLECULAR SEQUENCE DATA; PHYLOGENY; RECOMBINATION, GENETIC; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SWINE; VIRAL ENVELOPE PROTEINS;

EID: 46749126673     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: None     Document Type: Article

References (22)

1. Balliet, J. W., J. Berson, C. M. D'Cruz, J. Huang, J. Crane, J. M. Gilbert, and P. Bates. 1999. Production and characterization of a soluble, active form of Tva, the subgroup A avian sarcoma and leukosis virus receptor J. Virol. 73: 3054-3061.
2. Ericsson, T. A., Y. Takeuchi, C. Templin, G. Quinn, S. F. Farhadian, J. C. Wood, B. A. Oldmixon, K. M. Suling, J. K. Ishii, Y. Kitagawa, T. Miyazawa, D. R. Salomon, R. A. Weiss, and C. Patience. 2003. Identification of receptors for pig endogenous retrovirus. Proc. Natl. Acad. Sci. USA 100: 6759-6764.
3. Harrison, I., Y. Takeuchi, B. Bartosch, and J. P. Stoye. 2004. Determinants of high titer in recombinant porcine endogenous retroviruses. J. Virol. 78: 13871-13879.
4. Jo, S. K., H. S. Kim, S. W. Cho, and S. H. Seo. 2007. Genetic and antigenic characterization of swine H1N2 influenza viruses isolated from Korean pigs. J. Microbiol. Biotechnol. 17: 868-872
5. Kim, D., Y. K. Park, J. S. Lee. J. F. Kim, H. Jeong, B. S. Kim, and C. H. Lee. 2006. Analysis of a prodigiosin biosynthetic gene cluster from the marine bacterium Hahella chejuensis KCTC 2396. J. Microbiol. Biotechnol. 16: 1912-1918.
6. Machnik, G. D. Sypniewski, Z. Wydmuch. K. Cholewa, U. Mazurek. T. Wilczok, Z. Smorag, and J. Pacha. 2005. Sequence analysis of proviral DNA of porcine endogenous retroviruses. Transplant Proc. 37: 4610-4614.
7. Mackiewicz. P., D. Mackiewicz. M. Kowalczuk, and S. Cebrat. 2001. Flip-flop around the origin and terminus of replication in prokaryotic genomes. Genome Biol. 2: INTERACTIONS1004.1-1004.4.
8. Magre, S., Y. Takeuchi, and B. Bartosch. 2003. Xenotransplantation and pig endogenous retroviruses. Rev. Med. Virol. 13: 311-329.
9. Mang, R., J. Maas, X. Chen, J. Goudsmit, and A. C. van Der Kuyl. 2001. Identification of a novel type C porcine endogenous retrovirus: Evidence that copy number of endogenous retroviruses increases during host inbreeding. J. Gen. Virol. 82: 1829-1934.
10. Martina, Y., K. T. Marcucci, S. Cherqui, A. Szabo, T. Drysdale, U. Srinivisan, C. A. Wilson, C. Patience, and D. R. Salomon. 2006. Mice transgenic for a human porcine endogenous retrovirus receptor are susceptible to productive viral infection. J. Virol. 80: 3135-3146.
11. Oldmixon, B. A., J. C. Wood, T. A. Ericsson, C. A. Wilson, M. E. White-Scharf G. Andersson, J. L. Greenstein, H. J. Schuurman, and C. Patience. 2002. Porcine endogenous retrovirus transmission characteristics of an inbred herd of miniature swine. J. Virol. 76: 3045-3048.
12. Paradis, K., G. Langford, Z. Long, W. Heneine, P. Sandstrom, W. M. Switzer, L. E. Chapman, C. Lockey, D. Onions, and E. Otto. 1999. Search for cross-species transmission of porcine endogenous retrovirus in patients treated with living pig tissue. Science 285: 1236-1241.
13. Patience, C., Y. Takeuchi, and R. A. Weiss. 1997. Infection of human cells by an endogenous retrovirus of pigs. Nat. Med. 3: 282-286.
14. Rozanov, M., U. Plikat, C. Chappey, A. Kochergin, and T. Tatusova. 2004. A Web-based genotyping resource for viral sequences. Nucleic Acids Res. 32: W654-W659.
15. Rudd, P. M., T. Elliott, P. Cresswell, I. A. Wilson, and R. A. Dwek. 2001. Glycosylation and the immune system. Science 291: 2370-2376.
16. Specke, V., H. J. Schuurman, R. Plesker, C. Coulibaly, M. Ozel, G. Langford, R. Kurth, and J. Denner. 2002. Virus safety in xenotransplantation: First exploratory in vivo studies in small laboratory animals and non-human primates. Transpl. Immunol. 9: 281-288.
17. Suling, K., G. Quinn, J. Wood, and C. Patience. 2003. Packaging of human endogenous retrovirus sequences is undetectable in porcine endogenous retrovirus particles produced from human cells. Virology, 312: 330-336.
18. Suzuki, D. T., A. J. F. Griffiths, J. H. Miller, and R. C. Lewontin. 1989. An Introduction to Genetic Analysis, pp. 181-182, 4th Ed. W. H. Freeman and Company, New York.
19. Takeuchi, Y., C. Patience, S. Magre, R. A. Weiss, P. T. Banerjee, P. Le Tissier, and J. P. Stoye. 1998. Host range and interference studies of three classes of pig endogenous retrovirus. J. Virol. 72: 9986-9991.
20. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G Higgins. 1997. The CLUSTAL X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
21. Tidona, C. A. and G. Darai. 2001. The Springer Index of Viruses. Springer Verlag, Heidelberg.
22. Wood, J. C., G. Quinn. K. M. Suling, B. A. Oldmixon, B. A. Van line, R. Cina, S. Arn, C. A. Huang, L. Scobie, D. E. Onions, D. H. Sachs, H. J. Schuuman, J. A. Fishman, and C. Patience. 2004. Identification of exogenous forms of human-tropic porcine endogenous retrovints in miniature swine. J. Virol. 78: 2494-2501.