Genetic analysis and gene fine mapping of aroma in rice (Oryza sativa L. cyperales, poaceae)

Genetics and Molecular Biology

Volumn 31, Issue 2, 2008, Pages 532-538

  Sun, Shu Xia ^a,b   Gao, Fang Yuan ^b   Lu, Xian Jun ^b   Wu, Xian Jun ^a   Wang, Xu Dong ^a   Ren, Guang Jun ^b   Luo, Hong ^c  

^a SICHUAN AGRICULTURAL UNIVERSITY   (China)

^b CROP RESEARCH INSTITUTE   (China)

^c CLEMSON UNIVERSITY   (United States)

Author keywords

Aroma; Gene fine mapping; Genetic analysis; Rice (Oryza sativa L.)

Indexed keywords

AROMA; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME 8; CONTROLLED STUDY; DNA FLANKING REGION; GENE LOCUS; GENE MAPPING; GENE REPLICATION; GENE SEQUENCE; GENETIC MARKER; GRAIN; HYBRID; LINKAGE ANALYSIS; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT BREEDING; PLANT GENETICS; PLANT LEAF; POACEAE; RICE; SIMPLE SEQUENCE REPEAT;

BACTERIA (MICROORGANISMS); JAPONICA; ORYZA SATIVA; ORYZA SATIVA (INDICA CULTIVAR-GROUP); POACEAE; POALES;

EID: 46649098718     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/S1415-47572008000300021     Document Type: Article

References (29)

1. Ann SN, Bollich CN, McClung AM and Tanksley SD (1993) RFLP analysis of genomic regions associated with cooked-kernel elongation in rice. Theor Appl Genet 87:27-32.
2. Ahn SN, Bollich CN and Tanksley SD (1992) RFLP tagging of a gene for aroma in rice. Theor Appl Genet 84:825-828.
3. Bradbury MT, Fitzgerald TL, Henry RJ, Jin QS and Waters LE (2005a) The gene for fragrance in rice. Plant Biotechnol J 3:363-370.
4. Bradbury MT, Henry RJ, Jin QS, Reinke RF and Waters LE (2005b) A perfect marker for fragrance genotyping in rice Mol Breed 16:279-283.
5. Chen JW, Wang L, Pang XF and Pan QH (2006) Genetic analysis and fine mapping of a rice brown planthopper (Nilaparvata lugens Stal) resistance gene bph19(t). Mol Genet Genomics 275:321-329.
6. Cordeiro GM, Henry CMJ and Reinke RJ (2002) Identification of microsatellite markers for fragrance in rice by analysis of the rice genome sequence. Mol Breed 9:245-250.
7. Dhulappanavr CV (1976) Inheritance of scent in rice. Euphytica 25:659-662.
8. Hang YJ, Liu YB, Rao ZX and Pan XY (1995) Studies on inheretance of aroma characters of scented rice. Acta Agriculturae Jiangxi 7:88-93.
9. Jain N, Jain S, Saini N and Jain RK (2006) SSR analysis of chromosome 8 regions associated with aroma and cooked kernel elongation in Basmati rice. Euphytica 152:259-273.
10. Jin Q, Waters D, Cordeiro GM, Henry RJ and Reinke RF (2003) A single nucleotide polymorphism (SNP) marker linked to the fragrance gene in rice (Oryza sativa L.). Plant Sci 165:359-364.
11. Kuo SM, Chou SY, Wang AZ, Tseng TH, Chueh FS, Yen HE and Wang CS (2005) The betaine aldehyde dehydrogenase (BAD2) gene is not responsible for the aroma trait of SA0420 rice mutant derived by sodium azide mutagenesis. 5th International Rice Genetics Symposium and 3rd International Rice Functional Genomics Symposium, IRRI, Manila, abstract n. 224.
12. Li JH, Wang F, Liu WG, Jin SJ and Liu YB (2006) Genetic analysis and mapping by SSR marker for fragrance gene in rice Yuefeng B. Mol Plant Breed 4:54-58.
13. Li Q and Wan JM (2005) SSRHunter: Development of a local searching software for SSR sites. Hereditas 27:808-810.
14. Lincoln S, Daly M and Lander E (1992) Constructing genetic maps with MAPMAKER/EXP 3.0. Whitehead Institute Technical Report 3rd edition. Whitehead Institute, Cambridge.
15. Lorieux M, Petrov M, Huang N, Guiderdoni E and Ghesquiere A (1996) Aroma in rice: Genetic analysis of a quantitative trait. Theor Appl Genet 93:1145-1151.
16. Michelmore RW, Paran I and Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregation analysis: A rapid method to detect markers in specific genomic regions by using segregation population. Proc Natl Acad Sci USA 88:9828-9832.
17. Murray MG and Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321-4325.
18. Pan QH, Hu ZD, Takatoshi T and Wang L (2003) Fine mapping of the blast resistance gene Pi15, linked to Pii, on rice chromosome 9. Acta Bot Sin 45:871-877.
19. Paule CM and Powers JJ (1989) Sensory and chemical examination of aromatic and nonaromatic rice. J Food Sci 54:343-345.
20. Pinson SRM (1944) Inheritance of aroma in six rice cultivars. Crop Sci 34:1151-1157.
21. Reddy PR and Sathyanarayaniah K (1980) Inheritance of aroma in rice. Indian J Genet Plant Breed 40:327-329.
22. Schimenti J (2000) Segregation distortion of mouse t haplotypes: The molecular basis emerges. Trends Genet 16:240-243.
23. Sekhar BPS and Reddy GM (1982) Amino aid profiles in some scented rice varieties. Theor Appl Genet 62:35-37.
24. Siddiq EA, Sadananda AR and Zaman FU (1986) Use of primary trisomic of rice in genetic analysis. Rice Genetics Proc Int Rice Genetics Symp pp 1815-197.
25. Sood BG and Siddiq EA (1978) A rapid technique for scent determination in rice. Indian J Genet Plant Breed 38:268-271.
26. Tomar JB and Prassad SC (1997) Genetic analysis of aroma in rice landrace. Oryza 34:191-195.
27. van Boven M and Weissing FJ (2001) Competition at the mouse t complex: Rare alleles are inherently favored. Theor Popul Biol 60:343-358.
28. Wongpornchai S, Sriseadka T and Choonvisase S (2003) Identification and quantitation of the rice aroma compound, 2-acetyl-1-pyrroline, in bread flowers (Vallaris glabra Ktze). J Agric Food Chem 51:457-462.
29. Xu SB, Tao YF, Yang ZQ and Chu JY (2002) A simple and rapid methods used for silver staining and gel preservation. Hereditas 24:335-336.