Secretome: Definitions and biomedical interest;Le sécrétome : définitions et intérêt biomédical

Revue de Medecine Interne

Volumn 29, Issue 7, 2008, Pages 606-608

  Chenau, J ^a   Michelland, S ^a,b   Seve, M ^a,b  

^a INSTITUT ALBERT BONNIOT   (France)

^b GRENOBLE UNIVERSITY HOSPITAL   (France)

Author keywords

Biomarker; Cancer; Proteomics; Secreted proteins; Secretome

Indexed keywords

PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN SECRETION; PROTEOMICS; SHORT SURVEY;

HUMANS; MOLECULAR BIOLOGY; PROTEINS; PROTEOME; PROTEOMICS;

EID: 45849146986     PISSN: 02488663     EISSN: 17683122     Source Type: Journal    
DOI: 10.1016/j.revmed.2007.12.011     Document Type: Short Survey

References (16)

1. Tjalsma H., Bolhuis A., Jongbloed J.D., Bron S., and van Dijl J.M. Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome. Microbiol Mol Biol Rev 64 (2000) 515-547
2. Askonas B.A. Immunoglobulin formation in B lymphoid cells. J Clin Pathol Suppl 6 (1975) 8-12
3. Volmer M.W., Stuhler K., Zapatka M., Schoneck A., Klein-Scory S., Schmiegel W., et al. Differential proteome analysis of conditioned media to detect Smad4 regulated secreted biomarkers in colon cancer. Proteomics 5 (2005) 2587-2601
4. Nickel W. The mystery of nonclassical protein secretion. A current view on cargo proteins and potential export routes. Eur J Biochem 270 (2003) 2109-2119
5. Pisitkun T., Shen R.F., and Knepper M.A. Identification and proteomic profiling of exosomes in human urine. Proc Natl Acad Sci USA 101 (2004) 13368-13373
6. Bendtsen J.D., Nielsen H., von Heijne G., and Brunak S. Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 340 (2004) 783-795
7. Bendtsen J.D., Jensen L.J., Blom N., Von Heijne G., and Brunak S. Feature-based prediction of non-classical and leaderless protein secretion. Protein Eng Des Sel 17 (2004) 349-356
8. Altschul S.F., Gish W., Miller W., Myers E.W., and Lipman D.J. Basic local alignment search tool. J Mol Biol 215 (1990) 403-410
9. Klee E.W., Carlson D.F., Fahrenkrug S.C., Ekker S.C., and Ellis L.B. Identifying secretomes in people, pufferfish and pigs. Nucleic Acids Res 32 (2004) 1414-1421
10. Graves P.R., and Haystead T.A. Molecular biologist's guide to proteomics. Microbiol Mol Biol Rev 66 (2002) 39-63
11. Wu W.W., Wang G., Baek S.J., and Shen R.F. Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF. J Proteome Res 5 (2006) 651-658
12. Gronborg M., Kristiansen T.Z., Iwahori A., Chang R., Reddy R., Sato N., et al. Biomarker discovery from pancreatic cancer secretome using a differential proteomic approach. Mol Cell Proteomics 5 (2006) 157-171
13. Martin D.B., Gifford D.R., Wright M.E., Keller A., Yi E., Goodlett D.R., et al. Quantitative proteomic analysis of proteins released by neoplastic prostate epithelium. Cancer Res 64 (2004) 347-355
14. Khwaja F.W., Svoboda P., Reed M., Pohl J., Pyrzynska B., and Van Meir E.G. Proteomic identification of the wt-p53-regulated tumor cell secretome. Oncogene 7 (2006) 7650-7661
15. Anderson N.L., Polanski M., Pieper R., Gatlin T., Tirumalai R.S., Conrads T.P., et al. The human plasma proteome: a nonredundant list developed by combination of four separate sources. Mol Cell Proteomics 3 (2004) 311-326
16. Huang C.M., Ananthaswamy H.N., Barnes S., Ma Y., Kawai M., and Elmets C.A. Mass spectrometric proteomics profiles of in vivo tumor secretomes: capillary ultrafiltration sampling of regressive tumor masses. Proteomics 6 (2006) 6107-6116