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Volumn 5029 LNCS, Issue , 2008, Pages 244-254

Why greed works for shortest common superstring problem

Author keywords

[No Author keywords available]

Indexed keywords

APPROXIMATION ALGORITHMS; BOOLEAN FUNCTIONS; DNA; GENES; NUCLEIC ACIDS; ORGANIC ACIDS; PATTERN MATCHING; PERTURBATION TECHNIQUES; PHASE MODULATION; RANDOM PROCESSES;

EID: 45849146984     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-69068-9_23     Document Type: Conference Paper
Times cited : (11)

References (21)
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    • Armen, C., Stein, C.: A 2 2/3-approximation algorithm for the shortest superstring problem. In: Hirschberg, D.S., Meyers, G. (eds.) CPM 1996. LNCS, vol. 1075, pp. 87-101. Springer, Heidelberg (1996)
  • 3
    • 0542423500 scopus 로고    scopus 로고
    • Free bits, pcps and non-approximability -towards tight results
    • Bellare, M., Goldreich, O., Sudan, M.: Free bits, pcps and non-approximability -towards tight results. SIAM Journal on Computing 27, 804-915 (1998)
    • (1998) SIAM Journal on Computing , vol.27 , pp. 804-915
    • Bellare, M.1    Goldreich, O.2    Sudan, M.3
  • 5
    • 0004522238 scopus 로고    scopus 로고
    • Rotations of periodic strings and short super-strings
    • Breslauer, D., Jiang, T., Jiang, Z.: Rotations of periodic strings and short super-strings. Journal of Algorithms 24(2), 340-353 (1997)
    • (1997) Journal of Algorithms , vol.24 , Issue.2 , pp. 340-353
    • Breslauer, D.1    Jiang, T.2    Jiang, Z.3
  • 6
    • 0010835479 scopus 로고    scopus 로고
    • Greedy algorithms for the shortest common super-string that are asymptotically optimal
    • Frieze, A.M., Szpankowski, W.: Greedy algorithms for the shortest common super-string that are asymptotically optimal. Algorithmica 21(1), 21-36 (1998)
    • (1998) Algorithmica , vol.21 , Issue.1 , pp. 21-36
    • Frieze, A.M.1    Szpankowski, W.2
  • 9
    • 0024135088 scopus 로고
    • A greedy approximation algorithm for constructing shortest common superstrings
    • Tarhio, J., Ukkonen, E.: A greedy approximation algorithm for constructing shortest common superstrings. Theoretical Computer Science 57, 131-145 (1988)
    • (1988) Theoretical Computer Science , vol.57 , pp. 131-145
    • Tarhio, J.1    Ukkonen, E.2
  • 10
    • 0024749527 scopus 로고
    • Approximation algorithms for the shortest common superstring problem
    • Turner, J.: Approximation algorithms for the shortest common superstring problem. Information and Computation 83, 1-20 (1989)
    • (1989) Information and Computation , vol.83 , pp. 1-20
    • Turner, J.1
  • 11
    • 9944232572 scopus 로고    scopus 로고
    • The greedy algorithm for shortest superstrings
    • Kaplan, H., Shafrir, N.: The greedy algorithm for shortest superstrings. Information Processing Letters 93, 13-17 (2005)
    • (2005) Information Processing Letters , vol.93 , pp. 13-17
    • Kaplan, H.1    Shafrir, N.2
  • 15
    • 79952422098 scopus 로고
    • An algorithm for reconstructing protein and RNA sequences
    • Shapiro, M.B.: An algorithm for reconstructing protein and RNA sequences. Journal of ACM 14(4), 720-731 (1967)
    • (1967) Journal of ACM , vol.14 , Issue.4 , pp. 720-731
    • Shapiro, M.B.1
  • 16
    • 35248886169 scopus 로고    scopus 로고
    • Spielman, D.A., Teng, S.-H.: Smoothed analysis: Motivation and discrete models. In: Dehne, F., Sack, J.-R., Smid, M. (eds.) WADS 2003. LNCS, 2748, pp. 256-270. Springer, Heidelberg (2003)
    • Spielman, D.A., Teng, S.-H.: Smoothed analysis: Motivation and discrete models. In: Dehne, F., Sack, J.-R., Smid, M. (eds.) WADS 2003. LNCS, vol. 2748, pp. 256-270. Springer, Heidelberg (2003)
  • 17
    • 4243066295 scopus 로고    scopus 로고
    • Smoothed analysis of algorithms: Why the simplex algorithm usually takes polynomial time
    • Spielman, D.A., Teng, S.-H.: Smoothed analysis of algorithms: Why the simplex algorithm usually takes polynomial time. Journal of ACM 51(3), 385-463 (2004)
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    • Spielman, D.A.1    Teng, S.-H.2
  • 18
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    • 2.5-approximation algorithm for shortest superstring
    • Sweedyk, Z.: 2.5-approximation algorithm for shortest superstring. SIAM Journal on Computing 29(3), 954-986 (2000)
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    • Sweedyk, Z.1
  • 20
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    • Vassilevska, V.: Explicit inapproximability bounds for the shortest superstring problem. In: Jedrzejowicz, J., Szepietowski, A. (eds.) MFCS 2005. LNCS, 3618, pp. 793-800. Springer, Heidelberg (2005)
    • Vassilevska, V.: Explicit inapproximability bounds for the shortest superstring problem. In: Jedrzejowicz, J., Szepietowski, A. (eds.) MFCS 2005. LNCS, vol. 3618, pp. 793-800. Springer, Heidelberg (2005)
  • 21
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    • Shortest common superstring problem: Average case analysis for both exact and approximate matching
    • Yang, E.H., Zhang, Z.: Shortest common superstring problem: average case analysis for both exact and approximate matching. IEEE Transactions on Information Theory 45(6), 1867-1886 (1999)
    • (1999) IEEE Transactions on Information Theory , vol.45 , Issue.6 , pp. 1867-1886
    • Yang, E.H.1    Zhang, Z.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.