메뉴 건너뛰기




Volumn 89, Issue 4, 2008, Pages 841-852

Diversity of the a sequence of herpes simplex virus type 1 developed during evolution

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS DNA;

EID: 45549097011     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.83467-0     Document Type: Article
Times cited : (19)

References (46)
  • 1
    • 0035853056 scopus 로고    scopus 로고
    • Herpes simplex virus DNA packaging sequences adopt novel structures that are specifically recognized by a component of the cleavage and packaging machinery
    • Adelman, K., Salmon, B. & Baines, J. D. (2001). Herpes simplex virus DNA packaging sequences adopt novel structures that are specifically recognized by a component of the cleavage and packaging machinery. Proc Natl Acad Sci U S A 98, 3086-3091.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 3086-3091
    • Adelman, K.1    Salmon, B.2    Baines, J.D.3
  • 2
    • 51049120558 scopus 로고    scopus 로고
    • Baines, J. D. & Weller, S. K. (2005). Cleavage and packaging of herpes simplex virus 1 DNA. In Viral Genome Packaging Machines: Genetic, Structure, and Mechanism, pp. 135-150. Edited by C. E. Catalano. Georgetown & New York: Landes Bioscience/Eurekah.com and Kluwer Academic/Plenum Publishers.
    • Baines, J. D. & Weller, S. K. (2005). Cleavage and packaging of herpes simplex virus 1 DNA. In Viral Genome Packaging Machines: Genetic, Structure, and Mechanism, pp. 135-150. Edited by C. E. Catalano. Georgetown & New York: Landes Bioscience/Eurekah.com and Kluwer Academic/Plenum Publishers.
  • 3
    • 85053174372 scopus 로고    scopus 로고
    • Evolution of herpes simplex viruses
    • Edited by M. Studahl, P. Cinque & T. Bergström. New York: Taylor & Francis Group
    • Bowden, R. J. & McGeoch, D. J. (2006). Evolution of herpes simplex viruses. In Herpes Simplex Viruses, pp. 1-34. Edited by M. Studahl, P. Cinque & T. Bergström. New York: Taylor & Francis Group.
    • (2006) Herpes Simplex Viruses , pp. 1-34
    • Bowden, R.J.1    McGeoch, D.J.2
  • 4
    • 2442526121 scopus 로고    scopus 로고
    • High recombination rate in herpes simplex virus type 1 natural populations suggests significant co-infection
    • Bowden, R., Sakaoka, H., Donnelly, P. & Ward, P. (2004). High recombination rate in herpes simplex virus type 1 natural populations suggests significant co-infection. Infect Genet Evol 4, 115-123.
    • (2004) Infect Genet Evol , vol.4 , pp. 115-123
    • Bowden, R.1    Sakaoka, H.2    Donnelly, P.3    Ward, P.4
  • 5
    • 30944465177 scopus 로고    scopus 로고
    • Patterns of Eurasian HSV-1 molecular diversity and inferences of human migrations
    • Bowden, R., Sakaoka, H., Ward, P. & Donnelly, P. (2006). Patterns of Eurasian HSV-1 molecular diversity and inferences of human migrations. Infect Genet Evol 6, 63-74.
    • (2006) Infect Genet Evol , vol.6 , pp. 63-74
    • Bowden, R.1    Sakaoka, H.2    Ward, P.3    Donnelly, P.4
  • 7
    • 0021955725 scopus 로고
    • Isomerization of herpes simplex virus 1 genome: Identification of the cis-acting and recombination sites within the domain of the a sequence
    • Chou, J. & Roizman, B. (1985). Isomerization of herpes simplex virus 1 genome: identification of the cis-acting and recombination sites within the domain of the a sequence. Cell 41, 803-811.
    • (1985) Cell , vol.41 , pp. 803-811
    • Chou, J.1    Roizman, B.2
  • 8
    • 0022655615 scopus 로고
    • The terminal a sequence of the herpes simplex virus genome contains the promoter of a gene located in the repeat sequences of the L component
    • Chou, J. & Roizman, B. (1986). The terminal a sequence of the herpes simplex virus genome contains the promoter of a gene located in the repeat sequences of the L component. J Virol 57, 629-637.
    • (1986) J Virol , vol.57 , pp. 629-637
    • Chou, J.1    Roizman, B.2
  • 9
    • 0002771361 scopus 로고
    • Herpespiridae
    • Edited by A. J. Gibbs, C. H. Calisher & F. Garcia-Arenal. Cambridge: Cambridge University Press
    • Davison, A. J. & McGeoch, D. J. (1995). Herpespiridae. In Molecular Basis of Virus Evolution, pp. 290-309. Edited by A. J. Gibbs, C. H. Calisher & F. Garcia-Arenal. Cambridge: Cambridge University Press.
    • (1995) Molecular Basis of Virus Evolution , pp. 290-309
    • Davison, A.J.1    McGeoch, D.J.2
  • 10
    • 0019842340 scopus 로고
    • Nucleotide sequences of the joint between the L and S segments of herpes simplex virus types 1 and 2
    • Davison, A. J. & Wilkie, N. M. (1981). Nucleotide sequences of the joint between the L and S segments of herpes simplex virus types 1 and 2. J Gen Virol 53, 315-331.
    • (1981) J Gen Virol , vol.53 , pp. 315-331
    • Davison, A.J.1    Wilkie, N.M.2
  • 11
    • 0022521898 scopus 로고
    • Functional domains within the a sequence involved in the cleavage-packaging of herpes simplex virus DNA
    • Deiss, L P., Chou, J. & Frenkel, N. (1986). Functional domains within the a sequence involved in the cleavage-packaging of herpes simplex virus DNA. J Virol 59, 605-618.
    • (1986) J Virol , vol.59 , pp. 605-618
    • Deiss, L.P.1    Chou, J.2    Frenkel, N.3
  • 12
    • 0023987921 scopus 로고
    • Sequence analyses of herpesviral enzymes suggests an ancient origin for human sexual behavior
    • Gentry, G. A., Lowe, M., Alford, G. & Nevins, R. (1988). Sequence analyses of herpesviral enzymes suggests an ancient origin for human sexual behavior. Proc Natl Acad Sci U S A 85, 2658-2661.
    • (1988) Proc Natl Acad Sci U S A , vol.85 , pp. 2658-2661
    • Gentry, G.A.1    Lowe, M.2    Alford, G.3    Nevins, R.4
  • 13
    • 0034842662 scopus 로고    scopus 로고
    • Effects of mutations within the herpes simplex virus type 1 DNA encapsidation signal on packaging efficiency
    • Hodge, P. D. & Stow, N. D. (2001). Effects of mutations within the herpes simplex virus type 1 DNA encapsidation signal on packaging efficiency. J Virol 75, 8977-8986.
    • (2001) J Virol , vol.75 , pp. 8977-8986
    • Hodge, P.D.1    Stow, N.D.2
  • 17
    • 0031929475 scopus 로고    scopus 로고
    • Role of the DR2 repeat array in the regulation of the ICP34.5 gene promoter of herpes simplex virus type 1 during productive infection
    • Martin, D. W. & Weber, P. C. (1998). Role of the DR2 repeat array in the regulation of the ICP34.5 gene promoter of herpes simplex virus type 1 during productive infection. J Gen Virol 79, 517-523.
    • (1998) J Gen Virol , vol.79 , pp. 517-523
    • Martin, D.W.1    Weber, P.C.2
  • 19
    • 0028341110 scopus 로고
    • Molecular phylogeny of the Alphaherpesvirinae subfamily and a proposed evolutionary timescale
    • McGeoch, D. J. & Cook S. (1994). Molecular phylogeny of the Alphaherpesvirinae subfamily and a proposed evolutionary timescale. J Mol Biol 238, 9-22.
    • (1994) J Mol Biol , vol.238 , pp. 9-22
    • McGeoch, D.J.1    Cook, S.2
  • 21
    • 0028914853 scopus 로고
    • Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses
    • McGeoch, D. J., Cook, S., Dolan, A., Jamieson. F. E. & Telford, E. A. R. (1995). Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses. J Mol Biol 247, 443-458.
    • (1995) J Mol Biol , vol.247 , pp. 443-458
    • McGeoch, D.J.1    Cook, S.2    Dolan, A.3    Jamieson, F.E.4    Telford, E.A.R.5
  • 22
    • 0344150779 scopus 로고
    • Site-specific inversion sequence of the herpes simplex virus genome: Domain and structural features
    • Mocarski, E. S. & Roizman, B. (1981). Site-specific inversion sequence of the herpes simplex virus genome: domain and structural features. Proc Natl Acad Sci U S A 78, 7047-7051.
    • (1981) Proc Natl Acad Sci U S A , vol.78 , pp. 7047-7051
    • Mocarski, E.S.1    Roizman, B.2
  • 23
    • 0020399937 scopus 로고
    • Structure and role of the herpes simplex virus DNA termini in inversion, circularization and generation of virion DNA
    • Mocarski, E. S. & Roizman, B. (1982). Structure and role of the herpes simplex virus DNA termini in inversion, circularization and generation of virion DNA. Cell 31, 89-97.
    • (1982) Cell , vol.31 , pp. 89-97
    • Mocarski, E.S.1    Roizman, B.2
  • 24
    • 0019176944 scopus 로고
    • Molecular engineering of the herpes simplex virus genome: Insertion of a second L-S junction into the genome causes additional genome inversions
    • Mocarski, E. S., Post L. E. & Roizman, B. (1980). Molecular engineering of the herpes simplex virus genome: insertion of a second L-S junction into the genome causes additional genome inversions. Cell 22, 243-255.
    • (1980) Cell , vol.22 , pp. 243-255
    • Mocarski, E.S.1    Post, L.E.2    Roizman, B.3
  • 25
    • 0021832818 scopus 로고
    • s-a junction present in a defective herpes simplex virus genome
    • s-a junction present in a defective herpes simplex virus genome. J Virol 55, 140-146.
    • (1985) J Virol , vol.55 , pp. 140-146
    • Mocarski, E.S.1    Deiss, L.P.2    Frenkel, N.3
  • 26
    • 85053172463 scopus 로고    scopus 로고
    • The natural history and epidemiology of herpes simplex viruses
    • Edited by M. Studahl, P. Cinque & T. Bergström. New York: Taylor & Francis Group
    • Nahmias, A. J., Lee, F. K. & Beckman-Nahmias, S. (2006). The natural history and epidemiology of herpes simplex viruses. In Herpes Simplex Viruses, pp. 55-97. Edited by M. Studahl, P. Cinque & T. Bergström. New York: Taylor & Francis Group.
    • (2006) Herpes Simplex Viruses , pp. 55-97
    • Nahmias, A.J.1    Lee, F.K.2    Beckman-Nahmias, S.3
  • 27
    • 4644259016 scopus 로고    scopus 로고
    • PhylogeneLic analysis of clinical herpes simplex virus type 1 isolates identified three genetic groups and recombinant viruses
    • Norberg, P., Bergström, T., Rekabdar, E., Lindh, M. & Liljeqvist, J.-Å. (2004). PhylogeneLic analysis of clinical herpes simplex virus type 1 isolates identified three genetic groups and recombinant viruses. J Virol 78, 10755-10764.
    • (2004) J Virol , vol.78 , pp. 10755-10764
    • Norberg, P.1    Bergström, T.2    Rekabdar, E.3    Lindh, M.4    Liljeqvist, J.-Å.5
  • 28
    • 33845573534 scopus 로고    scopus 로고
    • Genotyping of clinical herpes simplex virus type 1 isolates by use of restriction enzymes
    • Norberg, P., Bergström, T. & Liljeqvist J.-Å. (2006). Genotyping of clinical herpes simplex virus type 1 isolates by use of restriction enzymes. J Clin Microbiol 44, 4511-4514.
    • (2006) J Clin Microbiol , vol.44 , pp. 4511-4514
    • Norberg, P.1    Bergström, T.2    Liljeqvist, J.-Å.3
  • 29
    • 34249774865 scopus 로고    scopus 로고
    • Glycoprotein 1 of herpes simplex virus type 1 contains a unique polymorphic tandem-repeated mucin region
    • Norberg, P., Olofsson, S., Tarp, M. A., Clausen, H., Bergström, T. & Liljeqvist, J.-Å. (2007). Glycoprotein 1 of herpes simplex virus type 1 contains a unique polymorphic tandem-repeated mucin region. J Gen Virol 88, 1683-1688.
    • (2007) J Gen Virol , vol.88 , pp. 1683-1688
    • Norberg, P.1    Olofsson, S.2    Tarp, M.A.3    Clausen, H.4    Bergström, T.5    Liljeqvist, J.-Å.6
  • 30
    • 0028345708 scopus 로고
    • Quantitative analysis of genomic polymorphism of herpes simplex virus type 1 strains from six countries: Studies of molecular evolution and molecular epidemiology of the virus
    • Sakaoka, H., Kurita, K, Iida, Y., Takada, S., Umene, K., Kim, Y. T., Ren, C. S. & Nahmias, A. J. (1994). Quantitative analysis of genomic polymorphism of herpes simplex virus type 1 strains from six countries: studies of molecular evolution and molecular epidemiology of the virus. J Gen Virol 75, 513-527.
    • (1994) J Gen Virol , vol.75 , pp. 513-527
    • Sakaoka, H.1    Kurita, K.2    Iida, Y.3    Takada, S.4    Umene, K.5    Kim, Y.T.6    Ren, C.S.7    Nahmias, A.J.8
  • 33
    • 0028100159 scopus 로고
    • Role of anisomorphic DNA conformations in negative regulation of a herpes simplex virus type 1 promoter
    • Sarisky, R. T. & Weber, P. C. (1994). Role of anisomorphic DNA conformations in negative regulation of a herpes simplex virus type 1 promoter. Virology 204, 569-579.
    • (1994) Virology , vol.204 , pp. 569-579
    • Sarisky, R.T.1    Weber, P.C.2
  • 35
    • 0019602924 scopus 로고
    • Construction of a double-joined herpes simplex viral DNA molecule: Inverted repeats are required for segment inversion, and direct repeats promote deletions
    • Smiley, J. R., Fong, B. S. & Leung, W.-C. (1981). Construction of a double-joined herpes simplex viral DNA molecule: inverted repeats are required for segment inversion, and direct repeats promote deletions. Virology 113, 345-362.
    • (1981) Virology , vol.113 , pp. 345-362
    • Smiley, J.R.1    Fong, B.S.2    Leung, W.-C.3
  • 36
    • 0025107081 scopus 로고
    • Sequence requirements for DNA rearrangements induced by the terminal repeat of herpes simplex virus type 1 KOS DNA
    • Smiley, J. R., Duncan, J. & Howes, M. (1990). Sequence requirements for DNA rearrangements induced by the terminal repeat of herpes simplex virus type 1 KOS DNA. J Virol 64, 5036-5050.
    • (1990) J Virol , vol.64 , pp. 5036-5050
    • Smiley, J.R.1    Duncan, J.2    Howes, M.3
  • 37
    • 0025946769 scopus 로고
    • Recombination of the internal direct repeat element DR2 responsible for the fluidity of the a sequence of herpes simplex virus type 1
    • Umene, K. (1991). Recombination of the internal direct repeat element DR2 responsible for the fluidity of the a sequence of herpes simplex virus type 1. J Virol 65, 5410-5416.
    • (1991) J Virol , vol.65 , pp. 5410-5416
    • Umene, K.1
  • 38
    • 0027268610 scopus 로고
    • Herpes simplex virus type 1 variant a sequence generated by recombination and breakage of the a sequence in defined regions, including the one involved in recombination
    • Umene, K. (1993). Herpes simplex virus type 1 variant a sequence generated by recombination and breakage of the a sequence in defined regions, including the one involved in recombination. J Virol 67, 5685-5691.
    • (1993) J Virol , vol.67 , pp. 5685-5691
    • Umene, K.1
  • 40
    • 0032821242 scopus 로고    scopus 로고
    • Mechanism and application of genetic recombination in herpesviruses
    • Umene, K. (1999). Mechanism and application of genetic recombination in herpesviruses. Rev Med Virol 9, 171-182.
    • (1999) Rev Med Virol , vol.9 , pp. 171-182
    • Umene, K.1
  • 41
    • 0037383798 scopus 로고    scopus 로고
    • Divergence of reiterated sequences in a series of genital isolates of herpes simplex virus type 1 from individual patients
    • Umene, K. & Kawana, T. (2003). Divergence of reiterated sequences in a series of genital isolates of herpes simplex virus type 1 from individual patients. J Gen Virol 84, 917-923.
    • (2003) J Gen Virol , vol.84 , pp. 917-923
    • Umene, K.1    Kawana, T.2
  • 42
    • 0030704282 scopus 로고    scopus 로고
    • Populations of two Eastern countries of Japan and Korea and with a related history share a predominant genotype of herpes simplex virus type 1
    • Umene, K. & Sakaoka, H. (1997). Populations of two Eastern countries of Japan and Korea and with a related history share a predominant genotype of herpes simplex virus type 1. Arch Virol 142, 1953-1961.
    • (1997) Arch Virol , vol.142 , pp. 1953-1961
    • Umene, K.1    Sakaoka, H.2
  • 43
    • 0032918144 scopus 로고    scopus 로고
    • Evolution of herpes simplex virus type 1 under herpseviral evolutionary processes
    • Umene, K. & Sakaoka, H. (1999). Evolution of herpes simplex virus type 1 under herpseviral evolutionary processes. Arch Virol 144, 637-656.
    • (1999) Arch Virol , vol.144 , pp. 637-656
    • Umene, K.1    Sakaoka, H.2
  • 44
    • 0027346163 scopus 로고
    • Genomic characterization of two predominant genotypes of herpes simplex virus type 1
    • Umene, K. & Yoshida, M. (1993). Genomic characterization of two predominant genotypes of herpes simplex virus type 1. Arch Virol 131, 29-46.
    • (1993) Arch Virol , vol.131 , pp. 29-46
    • Umene, K.1    Yoshida, M.2
  • 45
    • 33846113275 scopus 로고    scopus 로고
    • Discriminant analysis of DNA polymorphisms in herpes simplex virus type 1 strains involved in primary compared to recurrent infections
    • Umene, K., Koga, C. & Kameyama, T. (2007). Discriminant analysis of DNA polymorphisms in herpes simplex virus type 1 strains involved in primary compared to recurrent infections. J Virol Methods 139, 159-165.
    • (2007) J Virol Methods , vol.139 , pp. 159-165
    • Umene, K.1    Koga, C.2    Kameyama, T.3
  • 46
    • 0022006793 scopus 로고
    • Signals for site-specific cleavage of HSV DNA: Maturation involves two separate cleavage events at sites distal to the recognition sequences
    • Varmuza, S. L. & Smiley, J. R. (1985). Signals for site-specific cleavage of HSV DNA: maturation involves two separate cleavage events at sites distal to the recognition sequences. Cell 41, 793-802.
    • (1985) Cell , vol.41 , pp. 793-802
    • Varmuza, S.L.1    Smiley, J.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.