-
1
-
-
0029149631
-
Mitochondrial portraits of human populations using median networks
-
Bandelt H.J. Forster P. Sykes B.C. Richards M.B. Mitochondrial portraits of human populations using median networks Genetics 141 1995 743-753
-
(1995)
Genetics
, vol.141
, pp. 743-753
-
-
Bandelt, H.J.1
Forster, P.2
Sykes, B.C.3
Richards, M.B.4
-
3
-
-
0018166573
-
Restriction endonuclease fingerprinting of herpes simplex virus DNA: A novel epidemiological tool applied to a nosocomial outbreak
-
Buchman T.G. Roizman B. Adams G. Stover B.H. Restriction endonuclease fingerprinting of herpes simplex virus DNA: a novel epidemiological tool applied to a nosocomial outbreak J. Infect Dis. 138 1978 488-498
-
(1978)
J. Infect Dis.
, vol.138
, pp. 488-498
-
-
Buchman, T.G.1
Roizman, B.2
Adams, G.3
Stover, B.H.4
-
4
-
-
0029888376
-
Identification of a naturally occurring recombinant Epstein-Barr virus isolate from New Guinea that encodes both type 1 and type 2 nuclear antigen sequences
-
Burrows J.M. Khanna R. Sculley T.B. Alpers M.P. Moss D.J. et al. Identification of a naturally occurring recombinant Epstein-Barr virus isolate from New Guinea that encodes both type 1 and type 2 nuclear antigen sequences J. Virol. 70 1996 4829-4833
-
(1996)
J. Virol.
, vol.70
, pp. 4829-4833
-
-
Burrows, J.M.1
Khanna, R.2
Sculley, T.B.3
Alpers, M.P.4
Moss, D.J.5
-
5
-
-
0034075366
-
Testing for type-specific antibody to herpes simplex virus - Implications for clinical practice
-
Cowan F.M. Testing for type-specific antibody to herpes simplex virus - implications for clinical practice J. Antimicrob. Chemother. 45 2000 9-13
-
(2000)
J. Antimicrob. Chemother.
, vol.45
, pp. 9-13
-
-
Cowan, F.M.1
-
6
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing B. Hillier L. Wendl M.C. Green P. Base-calling of automated sequencer traces using phred. I. Accuracy assessment Genome Res. 8 1998 175-185
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
7
-
-
0035675042
-
Estimating recombination rates from population genetic data
-
Fearnhead P. Donnelly P. Estimating recombination rates from population genetic data Genetics 159 2001 1299-1318
-
(2001)
Genetics
, vol.159
, pp. 1299-1318
-
-
Fearnhead, P.1
Donnelly, P.2
-
8
-
-
0025336893
-
A cross-sectional study of herpes simplex virus types 1 and 2 in college students: Occurrence and determinants of infection
-
Gibson J.J. Hornung C.A. Alexander G.R. Lee F.K. Potts W.A. et al. A cross-sectional study of herpes simplex virus types 1 and 2 in college students: occurrence and determinants of infection J. Infect Dis. 162 1990 306-312
-
(1990)
J. Infect Dis.
, vol.162
, pp. 306-312
-
-
Gibson, J.J.1
Hornung, C.A.2
Alexander, G.R.3
Lee, F.K.4
Potts, W.A.5
-
9
-
-
2442615212
-
-
Phrap Homepage
-
Green, P., 2004. Phrap Homepage, http://www.phrap.org
-
(2004)
-
-
Green, P.1
-
10
-
-
0344417055
-
Variation within the glycoprotein B gene of human cytomegalovirus is due to homologous recombination
-
Haberland M. Meyer-Konig U. Hufert F.T. Variation within the glycoprotein B gene of human cytomegalovirus is due to homologous recombination J. Gen. Virol. 80 1999 149-150
-
(1999)
J. Gen. Virol.
, vol.80
, pp. 1495-1500
-
-
Haberland, M.1
Meyer-Konig, U.2
Hufert, F.T.3
-
11
-
-
0027366450
-
Restriction enzyme fragment length polymorphisms of amplified herpes simplex virus type-1 DNA provide epidemiologic information
-
Haugen T.H. Alden B. Matthey S. Nicholson D. Restriction enzyme fragment length polymorphisms of amplified herpes simplex virus type-1 DNA provide epidemiologic information Diagn. Microbiol. Infect. Dis. 17 1993 129-133
-
(1993)
Diagn. Microbiol. Infect. Dis.
, vol.17
, pp. 129-133
-
-
Haugen, T.H.1
Alden, B.2
Matthey, S.3
Nicholson, D.4
-
12
-
-
0000601292
-
The how and why of generating gene genealogies
-
Takahata, N., Clark, A.G. (Eds.), Japan Scientific Societies, Tokyo
-
Hudson, R.R., 1993. The how and why of generating gene genealogies. In: Takahata, N., Clark, A.G. (Eds.), Mechanisms of Molecular Evolution. Japan Scientific Societies, Tokyo, pp. 23-36.
-
(1993)
Mechanisms of Molecular Evolution
, pp. 23-36
-
-
Hudson, R.R.1
-
13
-
-
0035692320
-
Two-locus sampling distributions and their application
-
Hudson R.R. Two-locus sampling distributions and their application Genetics 159 2001 1805-1817
-
(2001)
Genetics
, vol.159
, pp. 1805-1817
-
-
Hudson, R.R.1
-
14
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson R.R. Kaplan N.L. Statistical properties of the number of recombination events in the history of a sample of DNA sequences Genetics 111 1985 147-164
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
15
-
-
0030305457
-
R: A language for data analysis and graphics
-
Ihaka R. Gentleman R. R: A language for data analysis and graphics J. Comput. Graph. Stat. 5 1996 299-314
-
(1996)
J. Comput. Graph. Stat.
, vol.5
, pp. 299-314
-
-
Ihaka, R.1
Gentleman, R.2
-
16
-
-
0029963710
-
A program for calculating and displaying compatibility matrices as an aid in determining reticulate evolution in molecular sequences
-
Jakobsen I.B. Easteal S. A program for calculating and displaying compatibility matrices as an aid in determining reticulate evolution in molecular sequences Comput. Appl. Biosci. 12 1996 291-295
-
(1996)
Comput. Appl. Biosci.
, vol.12
, pp. 291-295
-
-
Jakobsen, I.B.1
Easteal, S.2
-
17
-
-
0033912515
-
The distribution of human genetic diversity: A comparison of mitochondrial, autosomal, and Y-chromosome data
-
Jorde L.B. Watkins W.S. Bamshad M.J. Dixon M.E. Ricker C.E. et al. The distribution of human genetic diversity: a comparison of mitochondrial, autosomal, and Y-chromosome data Am. J. Hum Genet. 66 2000 979-988
-
(2000)
Am. J. Hum Genet.
, vol.66
, pp. 979-988
-
-
Jorde, L.B.1
Watkins, W.S.2
Bamshad, M.J.3
Dixon, M.E.4
Ricker, C.E.5
-
19
-
-
0029108122
-
Recombinants are isolated at high frequency following in vivo mixed ocular infection with two avirulent herpes simplex virus type 1 strains
-
Kintner R.L. Allan R.W. Brandt C.R. Recombinants are isolated at high frequency following in vivo mixed ocular infection with two avirulent herpes simplex virus type 1 strains Arch. Virol. 140 1995 231-244
-
(1995)
Arch. Virol.
, vol.140
, pp. 231-244
-
-
Kintner, R.L.1
Allan, R.W.2
Brandt, C.R.3
-
20
-
-
0034087351
-
Herpes simplex virus: The importance of asymptomatic shedding
-
Koelle D.M. Wald A. Herpes simplex virus: the importance of asymptomatic shedding J. Antimicrob. Chemother. 45 2000 1-8
-
(2000)
J. Antimicrob. Chemother.
, vol.45
, pp. 1-8
-
-
Koelle, D.M.1
Wald, A.2
-
21
-
-
0033523873
-
A prospective study of new infections with herpes simplex virus type 1 and type 2
-
Chiron HSV Vaccine Study Group
-
Langenberg A.G. Corey L. Ashley R.L. Leong W.P. Straus S.E. A prospective study of new infections with herpes simplex virus type 1 and type 2. Chiron HSV Vaccine Study Group N. Engl. J. Med. 341 1999 1432-1438
-
(1999)
N. Engl. J. Med.
, vol.341
, pp. 1432-1438
-
-
Langenberg, A.G.1
Corey, L.2
Ashley, R.L.3
Leong, W.P.4
Straus, S.E.5
-
22
-
-
0030403517
-
Mixed vaginal infections of Balb/c mice with low virulence herpes simplex type 1 strains result in restoration of virulence properties: Vaginitis/vulvitis and neuroinvasiveness
-
Lingen M. Hengerer F. Falke D. Mixed vaginal infections of Balb/c mice with low virulence herpes simplex type 1 strains result in restoration of virulence properties: vaginitis/vulvitis and neuroinvasiveness Med. Microbiol. Immunol. (Berl.) 185 1997 217-222
-
(1997)
Med. Microbiol. Immunol. (Berl.)
, vol.185
, pp. 217-222
-
-
Lingen, M.1
Hengerer, F.2
Falke, D.3
-
23
-
-
0028341110
-
Molecular phylogeny of the Alphaherpesvirinae subfamily and a proposed evolutionary timescale
-
McGeoch D.J. Cook S. Molecular phylogeny of the Alphaherpesvirinae subfamily and a proposed evolutionary timescale J. Mol. Biol. 238 1994 9-22
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 9-22
-
-
McGeoch, D.J.1
Cook, S.2
-
24
-
-
0023899276
-
The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1
-
McGeoch D.J. Dalrymple M.A. Davison A.J. Dolan A. Frame M.C. et al. The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1 J. Gen. Virol. 69 1988 1531-1574
-
(1988)
J. Gen. Virol.
, vol.69
, pp. 1531-1574
-
-
McGeoch, D.J.1
Dalrymple, M.A.2
Davison, A.J.3
Dolan, A.4
Frame, M.C.5
-
25
-
-
0022354892
-
Sequence determination and genetic content of the short unique region in the genome of herpes simplex virus type 1
-
McGeoch D.J. Dolan A. Donald S. Rixon F.J. Sequence determination and genetic content of the short unique region in the genome of herpes simplex virus type 1 J. Mol. Biol. 181 1985 1-13
-
(1985)
J. Mol. Biol.
, vol.181
, pp. 1-13
-
-
McGeoch, D.J.1
Dolan, A.2
Donald, S.3
Rixon, F.J.4
-
26
-
-
0033766850
-
Toward a comprehensive phylogeny for mammalian and avian herpesviruses
-
McGeoch D.J. Dolan A. Ralph A.C. Toward a comprehensive phylogeny for mammalian and avian herpesviruses J. Virol. 74 2000 10401-10406
-
(2000)
J. Virol.
, vol.74
, pp. 10401-10406
-
-
McGeoch, D.J.1
Dolan, A.2
Ralph, A.C.3
-
27
-
-
0036199914
-
A coalescent-based method for detecting and estimating recombination from gene sequences
-
McVean G. Awadalla P. Fearnhead P. A coalescent-based method for detecting and estimating recombination from gene sequences Genetics 160 2002 1231-1241
-
(2002)
Genetics
, vol.160
, pp. 1231-1241
-
-
McVean, G.1
Awadalla, P.2
Fearnhead, P.3
-
28
-
-
0025687123
-
Sero-epidemiological and sero-sociological patterns of herpes simplex virus infection in the world
-
Nahmias A.J. Lee F.K. Beckman-Nahmias S. Sero-epidemiological and sero-sociological patterns of herpes simplex virus infection in the world Scand. J. Infect Dis. Suppl. 69 1990 19-36
-
(1990)
Scand. J. Infect Dis. Suppl.
, vol.69
, pp. 19-36
-
-
Nahmias, A.J.1
Lee, F.K.2
Beckman-Nahmias, S.3
-
29
-
-
0033962299
-
Linkage disequilibrium, gene trees and selfing: An ancestral recombination graph with partial self-fertilization
-
Nordborg M. Linkage disequilibrium, gene trees and selfing: an ancestral recombination graph with partial self-fertilization Genetics 154 2000 923-929
-
(2000)
Genetics
, vol.154
, pp. 923-929
-
-
Nordborg, M.1
-
30
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas J. Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis Bioinformatics 15 1999 174-175
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
31
-
-
0028904848
-
Analysis of genomic polymorphism among herpes simplex virus type 2 isolates from four areas of Japan and three other countries
-
Sakaoka H. Kurita K. Gouro T. Kumamoto Y. Sawada S. et al. Analysis of genomic polymorphism among herpes simplex virus type 2 isolates from four areas of Japan and three other countries J. Med. Virol. 45 1995 259-272
-
(1995)
J. Med. Virol.
, vol.45
, pp. 259-272
-
-
Sakaoka, H.1
Kurita, K.2
Gouro, T.3
Kumamoto, Y.4
Sawada, S.5
-
32
-
-
0028345708
-
Quantitative analysis of genomic polymorphism of herpes simplex virus type 1 strains from six countries: Studies of molecular evolution and molecular epidemiology of the virus
-
Sakaoka H. Kurita K. Iida Y. Takada S. Umene K. et al. Quantitative analysis of genomic polymorphism of herpes simplex virus type 1 strains from six countries: studies of molecular evolution and molecular epidemiology of the virus J. Gen. Virol. 75 1994 513-527
-
(1994)
J. Gen. Virol.
, vol.75
, pp. 513-527
-
-
Sakaoka, H.1
Kurita, K.2
Iida, Y.3
Takada, S.4
Umene, K.5
-
33
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism Genetics 123 1989 585-595
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
34
-
-
0343619377
-
Glycoprotein G of herpes simplex virus type 1: Identification of type-specific epitopes by human antibodies
-
Tunback P. Liljeqvist J.A. Lowhagen G.B. Bergstrom T. Glycoprotein G of herpes simplex virus type 1: identification of type-specific epitopes by human antibodies J. Gen. Virol. 81 2000 1033-1040
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 1033-1040
-
-
Tunback, P.1
Liljeqvist, J.A.2
Lowhagen, G.B.3
Bergstrom, T.4
-
35
-
-
0020370533
-
A simple and practical method for typing and strain differentiation of herpes simplex virus using infected cell DNAs
-
Ueno T. Suzuki N. Sakaoka H. Fujinaga K. A simple and practical method for typing and strain differentiation of herpes simplex virus using infected cell DNAs Microbiol. Immunol. 26 1982 1159-1170
-
(1982)
Microbiol. Immunol.
, vol.26
, pp. 1159-1170
-
-
Ueno, T.1
Suzuki, N.2
Sakaoka, H.3
Fujinaga, K.4
-
36
-
-
0030704282
-
Populations of two Eastern countries of Japan and Korea and with a related history share a predominant genotype of herpes simplex virus type 1
-
Umene K. Sakaoka H. Populations of two Eastern countries of Japan and Korea and with a related history share a predominant genotype of herpes simplex virus type 1 Arch. Virol. 142 1997 1953-1961
-
(1997)
Arch. Virol.
, vol.142
, pp. 1953-1961
-
-
Umene, K.1
Sakaoka, H.2
-
37
-
-
0033955443
-
A comparison of estimators of the population recombination rate
-
Wall J.D. A comparison of estimators of the population recombination rate Mol. Biol. E 17 2000 156-163
-
(2000)
Mol. Biol. E
, vol.17
, pp. 156-163
-
-
Wall, J.D.1
-
38
-
-
0033870688
-
When did the human population size start increasing?
-
Wall J.D. Przeworski M. When did the human population size start increasing? Genetics 155 2000 1865-18749
-
(2000)
Genetics
, vol.155
, pp. 1865-1874
-
-
Wall, J.D.1
Przeworski, M.2
-
39
-
-
0035849323
-
Herpes simplex virus infections
-
Whitley R.J. Roizman B. Herpes simplex virus infections Lancet 357 2001 1513-1518
-
(2001)
Lancet
, vol.357
, pp. 1513-1518
-
-
Whitley, R.J.1
Roizman, B.2
-
40
-
-
0001909391
-
Do human and JC virus genes show evidence of host-parasite codemography?
-
Wooding S. Do human and JC virus genes show evidence of host-parasite codemography? Infect. Genet. Evol. 1 2001 3-12
-
(2001)
Infect. Genet. Evol.
, vol.1
, pp. 3-12
-
-
Wooding, S.1
-
41
-
-
0034848170
-
DAMBE: Software package for data analysis in molecular biology and evolution
-
Xia X. Xie Z. DAMBE: software package for data analysis in molecular biology and evolution J. Hered. 92 2001 371-373
-
(2001)
J. Hered.
, vol.92
, pp. 371-373
-
-
Xia, X.1
Xie, Z.2
|