-
1
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a comptementary DNA microarray
-
Schena,M., Shalon,D., Davis,R.W. and Brown,P.O. (1995) Quantitative monitoring of gene expression patterns with a comptementary DNA microarray. Science, 270, 467-470.
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
2
-
-
0027909781
-
Multiplexed biochemical assays with biological chips
-
Fodor,S.P., Rava,R.P., Huang,X.C., Pease,A.C., Holmes,C.P. and Adams,C.L. (1993) Multiplexed biochemical assays with biological chips. Nature, 364, 555-556.
-
(1993)
Nature
, vol.364
, pp. 555-556
-
-
Fodor, S.P.1
Rava, R.P.2
Huang, X.C.3
Pease, A.C.4
Holmes, C.P.5
Adams, C.L.6
-
3
-
-
84984933234
-
High density synthetic oligonucleotide arrays
-
Lipshutz,R.J., Fodor,S.P., Gingeras,T.R. and Lockhart,D.J. (1999) High density synthetic oligonucleotide arrays. Nat. Genet., 21, 20-24.
-
(1999)
Nat. Genet
, vol.21
, pp. 20-24
-
-
Lipshutz, R.J.1
Fodor, S.P.2
Gingeras, T.R.3
Lockhart, D.J.4
-
4
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu,V.E., Zhang,L., Vogelstein,B. and Kinzler,K.W. (1995) Serial analysis of gene expression. Science, 270, 484-487.
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Zhang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
5
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies,M., Egholm,M., Altman,W.E., Attiya,S., Bader,J.S., Bemben,L.A., Berka J., Braverman,M.S., Chen,Y.J., Chen,Z. et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature, 437, 376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
-
6
-
-
0034130561
-
Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
-
Brenner,S., Johnson,M., Bridgham,J., Golda,G., Lloyd,D.H., Johnson,D., Luo,S., McCurdy,S., Foy,M., Ewan,M. et al. (2000) Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays. Nat. Biotechnol., 18, 630-634.
-
(2000)
Nat. Biotechnol
, vol.18
, pp. 630-634
-
-
Brenner, S.1
Johnson, M.2
Bridgham, J.3
Golda, G.4
Lloyd, D.H.5
Johnson, D.6
Luo, S.7
McCurdy, S.8
Foy, M.9
Ewan, M.10
-
7
-
-
0024843545
-
Quantitative measurement of mRNAs by polymerase chain reaction
-
Delidow,B.C., Peluso,J.J. and White,B.A. (1989) Quantitative measurement of mRNAs by polymerase chain reaction. Gene Anal. Tech., 6, 120-124.
-
(1989)
Gene Anal. Tech
, vol.6
, pp. 120-124
-
-
Delidow, B.C.1
Peluso, J.J.2
White, B.A.3
-
8
-
-
15744381713
-
Kinetic PCR analysis: Real-time monitoring of DNA amplification reactions
-
Higuchi,R., Fockler,C., Dollinger,G. and Watson,R. (1993) Kinetic PCR analysis: Real-time monitoring of DNA amplification reactions. Biotechnology, 11, 1026-1030.
-
(1993)
Biotechnology
, vol.11
, pp. 1026-1030
-
-
Higuchi, R.1
Fockler, C.2
Dollinger, G.3
Watson, R.4
-
9
-
-
8744290969
-
A novel, high-performance random array platform for quantitative gene expression profiling
-
Kuhn,K., Baker,S.C., Chudin,E., Lieu,M.H., Oeser,S., Bennett,H., Rigault,P., Barker,D., McDaniel,T.K. and Chee,M.S. (2004) A novel, high-performance random array platform for quantitative gene expression profiling. Genome Res., 14, 2347-2356.
-
(2004)
Genome Res
, vol.14
, pp. 2347-2356
-
-
Kuhn, K.1
Baker, S.C.2
Chudin, E.3
Lieu, M.H.4
Oeser, S.5
Bennett, H.6
Rigault, P.7
Barker, D.8
McDaniel, T.K.9
Chee, M.S.10
-
10
-
-
0034747127
-
BADGE, beads array for the detection of gene expression, a high-throughput diagnostic bioassay
-
Yang,L., Tran,D.K. and Wang,X. (2001) BADGE, beads array for the detection of gene expression, a high-throughput diagnostic bioassay. Genome Res., 11, 1888-1898.
-
(2001)
Genome Res
, vol.11
, pp. 1888-1898
-
-
Yang, L.1
Tran, D.K.2
Wang, X.3
-
11
-
-
40449100030
-
Direct multiplexed measurement of gene expression with color-coded probe pairs
-
Geiss,G.K., Bumgarner,R.E., Birditt,B., Dahl,T., Dowidar,N., Dunaway,D.L., Fell,H.P., Ferree,S., George,R.D., Grogan,T. et al. (2008) Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat. Biotechnol., 26, 317-325.
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 317-325
-
-
Geiss, G.K.1
Bumgarner, R.E.2
Birditt, B.3
Dahl, T.4
Dowidar, N.5
Dunaway, D.L.6
Fell, H.P.7
Ferree, S.8
George, R.D.9
Grogan, T.10
-
12
-
-
0018800121
-
Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure
-
Kafatos,F.C., Jones,C.W. and Efstratiadis,A. (1979) Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure. Nucleic Acids Res., 7, 1541-1552.
-
(1979)
Nucleic Acids Res
, vol.7
, pp. 1541-1552
-
-
Kafatos, F.C.1
Jones, C.W.2
Efstratiadis, A.3
-
13
-
-
4344579087
-
RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples
-
Rogler,C.E., Tchaikovskaya,T., Norel,R., Massimi,A., Plescia,C., Rubashevsky,E., Siebert,P. and Rogler,L.E. (2004) RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples. Nucleic Acids Res., 32, e120.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Rogler, C.E.1
Tchaikovskaya, T.2
Norel, R.3
Massimi, A.4
Plescia, C.5
Rubashevsky, E.6
Siebert, P.7
Rogler, L.E.8
-
14
-
-
33645455639
-
Vertical arrays: Microarrays of complex mixtures of nucleic acids
-
Risques,R., Rondeau,G., Judex,M., McClelland,M. and Welsh,J. (2006) Vertical arrays: Microarrays of complex mixtures of nucleic acids. Methods Mol. Biol., 317, 99-109.
-
(2006)
Methods Mol. Biol
, vol.317
, pp. 99-109
-
-
Risques, R.1
Rondeau, G.2
Judex, M.3
McClelland, M.4
Welsh, J.5
-
15
-
-
0032903908
-
The transcriptional program in the response of human fibroblasts to serum
-
Iyer,V.R., Eisen,M.B., Ross,D.T., Schuler,G., Moore,T., Lee, J.C., Trent,J.M., Staudt,L.M., Hudson,J. Jr., Boguski,M.S. et al. (1999) The transcriptional program in the response of human fibroblasts to serum. Science, 283, 83-87.
-
(1999)
Science
, vol.283
, pp. 83-87
-
-
Iyer, V.R.1
Eisen, M.B.2
Ross, D.T.3
Schuler, G.4
Moore, T.5
Lee, J.C.6
Trent, J.M.7
Staudt, L.M.8
Hudson Jr., J.9
Boguski, M.S.10
-
16
-
-
26444563414
-
Enhanced microarray performance using low complexity representations of the transcriptome
-
Rondeau,G., McClelland,M., Nguyen,T., Risques,R., Wang,Y., Judex,M., Cho,A.H. and Welsh,J. (2005) Enhanced microarray performance using low complexity representations of the transcriptome. Nucleic Acids Res. 33, e100.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Rondeau, G.1
McClelland, M.2
Nguyen, T.3
Risques, R.4
Wang, Y.5
Judex, M.6
Cho, A.H.7
Welsh, J.8
-
17
-
-
0026784966
-
Arbitrarily primed PCR fingerprinting of RNA
-
Welsh,J., Chada,K., Dalal,S.S., Cheng,R., Ralph,D. and McClelland,M. (1992) Arbitrarily primed PCR fingerprinting of RNA. Nucleic Acids Res., 20, 4965-4970.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 4965-4970
-
-
Welsh, J.1
Chada, K.2
Dalal, S.S.3
Cheng, R.4
Ralph, D.5
McClelland, M.6
-
18
-
-
0026674886
-
Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction
-
Liang,P. and Pardee,A.B. (1992) Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science, 257, 967-971.
-
(1992)
Science
, vol.257
, pp. 967-971
-
-
Liang, P.1
Pardee, A.B.2
-
19
-
-
0032167952
-
Non-stoichiometric reduced complexity probes for cDNA arrays
-
Trenkle,T., Welsh,J., Jung,B., Mathieu-Daude,F. and McClelland,M. (1998) Non-stoichiometric reduced complexity probes for cDNA arrays. Nucleic Acids Res., 26, 3883-3891.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3883-3891
-
-
Trenkle, T.1
Welsh, J.2
Jung, B.3
Mathieu-Daude, F.4
McClelland, M.5
-
20
-
-
0027379372
-
RNA fingerprinting using arbitrarily primed PCR identifies differentially regulated RNAs in mink lung (Mv1Lu) cells growth arrested by transforming growth factor beta 1
-
Ralph,D., McClelland,M. and Welsh,J. (1993) RNA fingerprinting using arbitrarily primed PCR identifies differentially regulated RNAs in mink lung (Mv1Lu) cells growth arrested by transforming growth factor beta 1. Proc. Natl Acad. Sci. USA, 90, 10710-10714.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 10710-10714
-
-
Ralph, D.1
McClelland, M.2
Welsh, J.3
-
21
-
-
0027999503
-
Interactions among regulators of RNA abundance characterized using RNA fingerprinting by arbitrarily primed PCR
-
McClelland,M., Ralph,D., Cheng,R. and Welsh,J. (1994) Interactions among regulators of RNA abundance characterized using RNA fingerprinting by arbitrarily primed PCR. Nucleic Acids Res., 22, 4419-4431.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4419-4431
-
-
McClelland, M.1
Ralph, D.2
Cheng, R.3
Welsh, J.4
-
22
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Article
-
Smyth,G.K. (2004) Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol., 3, Article 3.
-
(2004)
Stat. Appl. Genet. Mol. Biol
, vol.3
, pp. 3
-
-
Smyth, G.K.1
-
23
-
-
0242333835
-
Normalization of cDNA microarray data
-
Smyth,G.K. and Speed,T. (2003) Normalization of cDNA microarray data. Methods, 31, 265-273.
-
(2003)
Methods
, vol.31
, pp. 265-273
-
-
Smyth, G.K.1
Speed, T.2
-
24
-
-
0038048164
-
Statistical issues in cDNA microarray data analysis
-
Smyth,G.K., Yang,Y.H. and Speed,T. (2003) Statistical issues in cDNA microarray data analysis. Methods Mol. Biol., 224, 111-136.
-
(2003)
Methods Mol. Biol
, vol.224
, pp. 111-136
-
-
Smyth, G.K.1
Yang, Y.H.2
Speed, T.3
-
25
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini,Y. and Hochberg,Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Stat. Soc. Ser B, 57, 289-300.
-
(1995)
J. Roy. Stat. Soc. Ser B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
26
-
-
19344363035
-
Gene expression signature of fibroblast serum response predicts human cancer progression: Similarities between tumors and wounds
-
Chang,H.Y., Sneddon,J.B., Alizadeh,A.A., Sood,R., West,R.B., Montgomery,K., Chi,J.T., van de Rijn,M., Botstein,D. and Brown,P.O. (2004) Gene expression signature of fibroblast serum response predicts human cancer progression: Similarities between tumors and wounds. PLoS Biol., 2, E7.
-
(2004)
PLoS Biol
, vol.2
-
-
Chang, H.Y.1
Sneddon, J.B.2
Alizadeh, A.A.3
Sood, R.4
West, R.B.5
Montgomery, K.6
Chi, J.T.7
van de Rijn, M.8
Botstein, D.9
Brown, P.O.10
-
27
-
-
2442689079
-
A versatile assay for high-throughput gene expression profiling on universal array matrices
-
Fan,J.B., Yeakley,J.M., Bibikova,M., Chudin,E., Wickham,E., Chen,J., Doucet,D., Rigault,P., Zhang,B., Shen,R. et al. (2004) A versatile assay for high-throughput gene expression profiling on universal array matrices. Genome Res., 14, 878-885.
-
(2004)
Genome Res
, vol.14
, pp. 878-885
-
-
Fan, J.B.1
Yeakley, J.M.2
Bibikova, M.3
Chudin, E.4
Wickham, E.5
Chen, J.6
Doucet, D.7
Rigault, P.8
Zhang, B.9
Shen, R.10
|