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Volumn 44, Issue 3, 2004, Pages 203-214

Searching for nitrile hydratase using the Consensus-Degenerate Hybrid Oligonucleotide Primers strategy

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; HYDROLYASE; NITRILE HYDRATASE; PRIMER DNA; PROTEIN SUBUNIT;

EID: 4544298110     PISSN: 0233111X     EISSN: None     Source Type: Journal    
DOI: 10.1002/jobm.200310340     Document Type: Article
Times cited : (9)

References (29)
  • 2
    • 0037209758 scopus 로고    scopus 로고
    • The nitrile-degrading enzymes: Current status and future prospects
    • BANERJEE, A., SHARMA, R. and BANERJEE, U. C., 2002. The nitrile-degrading enzymes: current status and future prospects. Appl. Microbiol. Biotechnol., 60, 33-44.
    • (2002) Appl. Microbiol. Biotechnol. , vol.60 , pp. 33-44
    • Banerjee, A.1    Sharma, R.2    Banerjee, U.C.3
  • 3
    • 0031963112 scopus 로고    scopus 로고
    • Enantioselective hydration of 2-arylpropionitriles by a nitrile hydratase from Agrobacterium tumefaciens strain d3
    • BAUER, R., KNACKMUSS, H. J. and STOLZ, A., 1998. Enantioselective hydration of 2-arylpropionitriles by a nitrile hydratase from Agrobacterium tumefaciens strain d3. Appl. Microbiol. Biotechnol., 49, 89-95.
    • (1998) Appl. Microbiol. Biotechnol. , vol.49 , pp. 89-95
    • Bauer, R.1    Knackmuss, H.J.2    Stolz, A.3
  • 4
    • 0024967143 scopus 로고
    • Sleuthing out bacterial identities
    • BOCHNER, B. R., 1989. Sleuthing out bacterial identities. Nature, 339, 157-158.
    • (1989) Nature , vol.339 , pp. 157-158
    • Bochner, B.R.1
  • 5
    • 0142040932 scopus 로고    scopus 로고
    • Diversity of nitrile hydratase and amidase enzyme genes in Rhodococcus erythropolis recovered from geographically distinct habitats
    • BRANDAO, P. F., CLAPP, J. P. and BULL, A. T., 2003. Diversity of nitrile hydratase and amidase enzyme genes in Rhodococcus erythropolis recovered from geographically distinct habitats. Appl. Environ. Microbiol., 69, 5754-5766.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 5754-5766
    • Brandao, P.F.1    Clapp, J.P.2    Bull, A.T.3
  • 7
    • 0036323668 scopus 로고    scopus 로고
    • Bacterial alkaline proteases: Molecular approaches and industrial applications
    • GUPTA, R., BEG, Q. K. and LORENZ, P., 2002. Bacterial alkaline proteases: molecular approaches and industrial applications. Appl. Microbiol. Biotechnol., 59, 15-32.
    • (2002) Appl. Microbiol. Biotechnol. , vol.59 , pp. 15-32
    • Gupta, R.1    Beg, Q.K.2    Lorenz, P.3
  • 8
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • HALL, T. A., 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser., 41, 95-98.
    • (1999) Nucl. Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 9
    • 0028825276 scopus 로고
    • Automated construction and graphical presentation of protein blocks from unaligned sequences
    • HENIKOFF, S., HENIKOFF, J. G., ALFORD, W. J. and PIETROKOVSKI, S., 1995. Automated construction and graphical presentation of protein blocks from unaligned sequences. Gene, 163, GC17-GC26.
    • (1995) Gene , vol.163
    • Henikoff, S.1    Henikoff, J.G.2    Alford, W.J.3    Pietrokovski, S.4
  • 10
    • 0033848704 scopus 로고    scopus 로고
    • Development of polymerase chain reaction-based assays for bacterial gene detection
    • JOHNSON, J. R., 2000. Development of polymerase chain reaction-based assays for bacterial gene detection. J. Microbiol. Methods., 41, 201-209.
    • (2000) J. Microbiol. Methods. , vol.41 , pp. 201-209
    • Johnson, J.R.1
  • 11
    • 0031924251 scopus 로고    scopus 로고
    • Cloning of genes coding for the three subunits of thiocyanate hydrolase of Thiobacillus thioparus THI 115 and their evolutionary relationships to nitrile hydratase
    • KATAYAMA, Y., MATSUSHITA, Y., KANEKO, M., KONDO, M., MIZUNO, T. and NYUNOYA, H., 1998. Cloning of genes coding for the three subunits of thiocyanate hydrolase of Thiobacillus thioparus THI 115 and their evolutionary relationships to nitrile hydratase. J. Bacteriol., 180, 2583-2589.
    • (1998) J. Bacteriol. , vol.180 , pp. 2583-2589
    • Katayama, Y.1    Matsushita, Y.2    Kaneko, M.3    Kondo, M.4    Mizuno, T.5    Nyunoya, H.6
  • 12
    • 0034307780 scopus 로고    scopus 로고
    • Cloning and expression of the nitrile hydratase and amidase genes from Bacillus sp. BR449 into Escherichia coli
    • KIM, S. and ORIEL, P., 2000. Cloning and expression of the nitrile hydratase and amidase genes from Bacillus sp. BR449 into Escherichia coli. Enzyme Microb. Technol., 27, 492-501.
    • (2000) Enzyme Microb. Technol. , vol.27 , pp. 492-501
    • Kim, S.1    Oriel, P.2
  • 13
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • KUMAR, S., TAMURA, K., JAKOBSEN, I. B. and NEI, M., 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics, 17, 1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 15
    • 0036228279 scopus 로고    scopus 로고
    • Nitrile- and amide-converting microbial enzymes: Stereo-, regio- and chemoselectivity
    • MARTINKOVA, L. and KREN, V., 2002. Nitrile- and amide-converting microbial enzymes: Stereo-, regio- and chemoselectivity. Biocatal. Biotrans., 20, 73-93.
    • (2002) Biocatal. Biotrans. , vol.20 , pp. 73-93
    • Martinkova, L.1    Kren, V.2
  • 16
    • 0025747960 scopus 로고
    • Purification, cloning, and primary structure of a new enantiomer-selective amidase from a Rhodococcus strain: Structural evidence for a conserved genetic coupling with nitrile hydratase
    • MAYAUX, J. F., CERBELAUD, E., SOUBRIER, F., YEH, P., BLANCHE, F. and PETRE, D., 1991. Purification, cloning, and primary structure of a new enantiomer-selective amidase from a Rhodococcus strain: structural evidence for a conserved genetic coupling with nitrile hydratase. J. Bacteriol., 173, 6694-6704.
    • (1991) J. Bacteriol. , vol.173 , pp. 6694-6704
    • Mayaux, J.F.1    Cerbelaud, E.2    Soubrier, F.3    Yeh, P.4    Blanche, F.5    Petre, D.6
  • 18
    • 0023118310 scopus 로고
    • Nitrile hydratase of Pseudomonas chlororaphis B23. Purification and characterization
    • NAGASAWA, T., NANBA, H., RYUNO, K., TAKEUCHI, K. and YAMADA, H., 1987. Nitrile hydratase of Pseudomonas chlororaphis B23. Purification and characterization. Eur. J. Biochem., 162, 691-698.
    • (1987) Eur. J. Biochem. , vol.162 , pp. 691-698
    • Nagasawa, T.1    Nanba, H.2    Ryuno, K.3    Takeuchi, K.4    Yamada, H.5
  • 19
    • 0025761763 scopus 로고
    • Cloning and characterization of genes responsible for metabolism of nitrile compounds from Pseudomonas chlororaphis B23
    • NISHIYAMA, M., HORINOUCHI, S., KOBAYASHI, M., NAGASAWA, T., YAMADA, H. and BEPPU, T., 1991. Cloning and characterization of genes responsible for metabolism of nitrile compounds from Pseudomonas chlororaphis B23. J. Bacteriol., 173, 2465-2472.
    • (1991) J. Bacteriol. , vol.173 , pp. 2465-2472
    • Nishiyama, M.1    Horinouchi, S.2    Kobayashi, M.3    Nagasawa, T.4    Yamada, H.5    Beppu, T.6
  • 21
    • 0035899963 scopus 로고    scopus 로고
    • Rapid and specific identification of nitrile hydratase (NHase)-encoding genes in soil samples by polymerase chain reaction
    • PRECIGOU, S., GOULAS, P. and DURAN, R., 2001. Rapid and specific identification of nitrile hydratase (NHase)-encoding genes in soil samples by polymerase chain reaction. FEMS Microbiol. Lett., 204, 155-161.
    • (2001) FEMS Microbiol. Lett. , vol.204 , pp. 155-161
    • Precigou, S.1    Goulas, P.2    Duran, R.3
  • 23
    • 0032052770 scopus 로고    scopus 로고
    • Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences
    • ROSE, T. M., SCHULTZ, E. R., HENIKOFF, J. G., PIETROKOVSKI, S., MCCALLUM, C. M. and HENIKOFF, S., 1998. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res., 26, 1628-1635.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1628-1635
    • Rose, T.M.1    Schultz, E.R.2    Henikoff, J.G.3    Pietrokovski, S.4    McCallum, C.M.5    Henikoff, S.6
  • 25
    • 0033898853 scopus 로고    scopus 로고
    • Rapid detection of polyhydroxyalkanoate-accumulating bacteria isolated from the environment by colony PCR
    • SHEU, D. S., WANG, Y. T. and LEE, C. Y., 2000. Rapid detection of polyhydroxyalkanoate-accumulating bacteria isolated from the environment by colony PCR. Microbiology, 146, 2019-2025.
    • (2000) Microbiology , vol.146 , pp. 2019-2025
    • Sheu, D.S.1    Wang, Y.T.2    Lee, C.Y.3
  • 27
    • 0024376686 scopus 로고
    • Minimal homology requirements for PCR primers
    • SOMMER, R. and TAUTZ, D., 1989. Minimal homology requirements for PCR primers. Nucleic Acids Res., 17, 6749.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 6749
    • Sommer, R.1    Tautz, D.2
  • 28
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • THOMPSON, J. D., HIGGINS, D. G. and GIBSON, T. J., 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 29
    • 0030944711 scopus 로고    scopus 로고
    • Cloning and sequencing of a nitrile hydratase gene from Pseudonocardia thermophila JCM3095
    • YAMAKI, T., OIKAWA, T., ITO, K. and NAKAMURA, T., 1997. Cloning and sequencing of a nitrile hydratase gene from Pseudonocardia thermophila JCM3095. J. Ferment. Bioeng., 83, 474-477.
    • (1997) J. Ferment. Bioeng. , vol.83 , pp. 474-477
    • Yamaki, T.1    Oikawa, T.2    Ito, K.3    Nakamura, T.4


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