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Volumn , Issue , 2007, Pages 60-66

Structural characterization of RNA-binding sites of proteins: Preliminary results

Author keywords

[No Author keywords available]

Indexed keywords

AMINES; AMINO ACIDS; BINDING ENERGY; BINDING SITES; BIOCHEMISTRY; BIOCOMMUNICATIONS; BIOINFORMATICS; CHAINS; FRICTION; HEALTH; INFORMATION SCIENCE; INTERFACES (MATERIALS); ORGANIC ACIDS; RNA; STEEL ANALYSIS; STRUCTURAL ANALYSIS; SURFACE ROUGHNESS; SURFACES;

EID: 44949131681     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBMW.2007.4425401     Document Type: Conference Paper
Times cited : (3)

References (22)
  • 3
    • 18444383371 scopus 로고    scopus 로고
    • Protein families and rna recognition
    • Y. Chen and G. Varani. Protein families and rna recognition. FEES Journal, 272(9):2088-2097, 2005.
    • (2005) FEES Journal , vol.272 , Issue.9 , pp. 2088-2097
    • Chen, Y.1    Varani, G.2
  • 4
    • 0002761958 scopus 로고
    • Measurement of protein surface shape by solid angles
    • M. L. Connolly. Measurement of protein surface shape by solid angles. Journal of Molecular Graphics, 4(l):3-6, 1986.
    • (1986) Journal of Molecular Graphics , vol.4 , Issue.L , pp. 3-6
    • Connolly, M.L.1
  • 5
    • 0027159949 scopus 로고
    • The molecular surface package
    • M. L. Connolly. The molecular surface package. J Mol Graph, 11(2): 139-41, 1993.
    • (1993) J Mol Graph , vol.11 , Issue.2 , pp. 139-141
    • Connolly, M.L.1
  • 6
    • 33847042739 scopus 로고    scopus 로고
    • Protein-rna interactions: Structural analysis and functional classes
    • J. Ellis, M. Broom, and S. Jones. Protein-rna interactions: structural analysis and functional classes. Proteins, 66(4):903-11, 2007.
    • (2007) Proteins , vol.66 , Issue.4 , pp. 903-911
    • Ellis, J.1    Broom, M.2    Jones, S.3
  • 7
    • 33750992165 scopus 로고    scopus 로고
    • The cell biology of hiv-1 and other retroviruses
    • E. O. Freed and A. J. Mouland. The cell biology of hiv-1 and other retroviruses. Retrovirology, 3(77), 2006.
    • (2006) Retrovirology , vol.3 , Issue.77
    • Freed, E.O.1    Mouland, A.J.2
  • 8
    • 18244362861 scopus 로고    scopus 로고
    • A neural network method for identification of rna-interacting residues in protein
    • E. Jeong, I.-F. Chung, and S. Miyano. A neural network method for identification of rna-interacting residues in protein. Genome Informatics, 15(1): 105-116, 2004.
    • (2004) Genome Informatics , vol.15 , Issue.1 , pp. 105-116
    • Jeong, E.1    Chung, I.-F.2    Miyano, S.3
  • 9
    • 37249047085 scopus 로고    scopus 로고
    • A weighted profile method for protein-rna interaction prediction
    • IV:123-139
    • E. Jeong and S. Miyano. A weighted profile method for protein-rna interaction prediction. Trans. On Comput. Syst. Biol., IV:123-139, 2006.
    • (2006) Trans. On Comput. Syst. Biol
    • Jeong, E.1    Miyano, S.2
  • 11
    • 0042671357 scopus 로고    scopus 로고
    • Pre-mrna splicing: Awash in a sea of proteins
    • M. S. Jurica and M. J. Moore. Pre-mrna splicing: awash in a sea of proteins. Mol. Cell, 12:5-14, 2003.
    • (2003) Mol. Cell , vol.12 , pp. 5-14
    • Jurica, M.S.1    Moore, M.J.2
  • 12
    • 0015222647 scopus 로고
    • The interpretation of protein structures: Estimation of static accessibility
    • B. Lee and F. M. Richards. The interpretation of protein structures: Estimation of static accessibility. J Mol Biol, 55:379-400, 1971.
    • (1971) J Mol Biol , vol.55 , pp. 379-400
    • Lee, B.1    Richards, F.M.2
  • 13
    • 26444598454 scopus 로고    scopus 로고
    • Protein-nucleic acid recognition: Statistical analysis of atomic interactions and influence of dna structure
    • D. Lejeune, N. Delsaux, B. Charloteaux, A. Thomas, and R. Brasseur. Protein-nucleic acid recognition: statistical analysis of atomic interactions and influence of dna structure. Proteins, 61(2):258-71, 2005.
    • (2005) Proteins , vol.61 , Issue.2 , pp. 258-271
    • Lejeune, D.1    Delsaux, N.2    Charloteaux, B.3    Thomas, A.4    Brasseur, R.5
  • 14
    • 0022347081 scopus 로고
    • Fractal surfaces of proteins
    • M. Lewis and D. Rees. Fractal surfaces of proteins. Science, 230(4730): 1163-1165, 1985.
    • (1985) Science , vol.230 , Issue.4730 , pp. 1163-1165
    • Lewis, M.1    Rees, D.2
  • 15
    • 0034823943 scopus 로고    scopus 로고
    • T.M and W. E. Statistical analysis of atomic contacts at rna-protein interfaces. J Mol Recognit, 14(4): 199-214, 2001.
    • T.M and W. E. Statistical analysis of atomic contacts at rna-protein interfaces. J Mol Recognit, 14(4): 199-214, 2001.
  • 16
    • 24644502657 scopus 로고    scopus 로고
    • M. J. Moore. From birth to death: the complex lives of eukaryotic mrnas. Science, 309:15141518, 2005.
    • M. J. Moore. From birth to death: the complex lives of eukaryotic mrnas. Science, 309:15141518, 2005.
  • 17
    • 24644437810 scopus 로고    scopus 로고
    • H. F. Noller. Rna structure: reading the ribosome. Science, 309:15081514,2005.
    • H. F. Noller. Rna structure: reading the ribosome. Science, 309:15081514,2005.
  • 18
    • 0036328545 scopus 로고    scopus 로고
    • Cx, an algorithm that identifies protruding atoms in proteins
    • A. Pintar, O. Carugo, and S. Pongor. Cx, an algorithm that identifies protruding atoms in proteins. Bioinformatics, 18(7):980-4, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.7 , pp. 980-984
    • Pintar, A.1    Carugo, O.2    Pongor, S.3
  • 19
    • 33746487738 scopus 로고    scopus 로고
    • Identifying interaction sites in "recalcitrant" proteins: Predicted protein and rna binding sites in rev proteins of hiv-1 and eiav agree with experimental data
    • M. Terribilini, J.-H. Lee, C. Yan, R. L. Jernigan, S. Carpenter, V. Honavar, and D. Dobbs. Identifying interaction sites in "recalcitrant" proteins: Predicted protein and rna binding sites in rev proteins of hiv-1 and eiav agree with experimental data. In Pacific Symposium on Biocomputing, volume 11, pages 415-426, 2006.
    • (2006) Pacific Symposium on Biocomputing , vol.11 , pp. 415-426
    • Terribilini, M.1    Lee, J.-H.2    Yan, C.3    Jernigan, R.L.4    Carpenter, S.5    Honavar, V.6    Dobbs, D.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.