-
1
-
-
0035845511
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
-
58566 11553815 10.1073/pnas.191367098
-
Sorlie T Perou CM Tibshirani R Aas T Geisler S Johnsen H Hastie T Eisen MB van de Rijn M Jeffrey SS Thorsen T Quist H Matese JC Brown PO Botstein D Eystein Lonning P Borresen-Dale AL Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications Proc Natl Acad Sci U S A 2001, 98(19):10869-10874. 58566 11553815 10.1073/pnas.191367098
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, Issue.19
, pp. 10869-10874
-
-
Sorlie, T.1
Perou, C.M.2
Tibshirani, R.3
Aas, T.4
Geisler, S.5
Johnsen, H.6
Hastie, T.7
Eisen, M.B.8
van de Rijn, M.9
Jeffrey, S.S.10
Thorsen, T.11
Quist, H.12
Matese, J.C.13
Brown, P.O.14
Botstein, D.15
Eystein Lonning, P.16
Borresen-Dale, A.L.17
-
2
-
-
0042838307
-
Breast cancer classification and prognosis based on gene expression profiles from a population-based study
-
193572 12917485 10.1073/pnas.1732912100
-
Sotiriou C Neo SY McShane LM Korn EL Long PM Jazaeri A Martiat P Fox SB Harris AL Liu ET Breast cancer classification and prognosis based on gene expression profiles from a population-based study Proc Natl Acad Sci U S A 2003, 100(18):10393-10398. 193572 12917485 10.1073/ pnas.1732912100
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, Issue.18
, pp. 10393-10398
-
-
Sotiriou, C.1
Neo, S.Y.2
McShane, L.M.3
Korn, E.L.4
Long, P.M.5
Jazaeri, A.6
Martiat, P.7
Fox, S.B.8
Harris, A.L.9
Liu, E.T.10
-
3
-
-
13444249852
-
Prediction of cancer outcome with microarrays: A multiple random validation strategy
-
10.1016/S0140-6736(05)17866-0 15705458
-
Michiels S Koscielny S Hill C Prediction of cancer outcome with microarrays: A multiple random validation strategy Lancet 2005, 365(9458):488-492. 10.1016/S0140-6736(05)17866-0 15705458
-
(2005)
Lancet
, vol.365
, Issue.9458
, pp. 488-492
-
-
Michiels, S.1
Koscielny, S.2
Hill, C.3
-
4
-
-
13444282534
-
Outcome signature genes in breast cancer: Is there a unique set?
-
10.1093/bioinformatics/bth469 15308542
-
Ein-Dor L Kela I Getz G Givol D Domany E Outcome signature genes in breast cancer: Is there a unique set? Bioinformatics 2005, 21(2):171-178. 10.1093/bioinformatics/bth469 15308542
-
(2005)
Bioinformatics
, vol.21
, Issue.2
, pp. 171-178
-
-
Ein-Dor, L.1
Kela, I.2
Getz, G.3
Givol, D.4
Domany, E.5
-
5
-
-
33144462268
-
Gene expression profiling in breast cancer: Understanding the molecular basis of histologic grade to improve prognosis
-
16478745
-
Sotiriou C Wirapati P Loi S Harris A Fox S Smeds J Nordgren H Farmer P Praz V Haibe-Kains B Desmedt C Larsimont D Cardoso F Peterse H Nuyten D Buyse M Van de Vijver MJ Bergh J Piccart M Delorenzi M Gene expression profiling in breast cancer: Understanding the molecular basis of histologic grade to improve prognosis J Natl Cancer Inst 2006, 98(4):262-272. 16478745
-
(2006)
J Natl Cancer Inst
, vol.98
, Issue.4
, pp. 262-272
-
-
Sotiriou, C.1
Wirapati, P.2
Loi, S.3
Harris, A.4
Fox, S.5
Smeds, J.6
Nordgren, H.7
Farmer, P.8
Praz, V.9
Haibe-Kains, B.10
Desmedt, C.11
Larsimont, D.12
Cardoso, F.13
Peterse, H.14
Nuyten, D.15
Buyse, M.16
Van de Vijver, M.J.17
Bergh, J.18
Piccart, M.19
Delorenzi, M.20
more..
-
6
-
-
34247145491
-
Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade
-
10.1200/JCO.2006.07.1522 17401012
-
Loi S Haibe-Kains B Desmedt C Lallemand F Tutt AM Gillet C Ellis P Harris A Bergh J Foekens JA Klijn JG Larsimont D Buyse M Bontempi G Delorenzi M Piccart MJ Sotiriou C Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade J Clin Oncol 2007, 25(10):1239-1246. 10.1200/ JCO.2006.07.1522 17401012
-
(2007)
J Clin Oncol
, vol.25
, Issue.10
, pp. 1239-1246
-
-
Loi, S.1
Haibe-Kains, B.2
Desmedt, C.3
Lallemand, F.4
Tutt, A.M.5
Gillet, C.6
Ellis, P.7
Harris, A.8
Bergh, J.9
Foekens, J.A.10
Klijn, J.G.11
Larsimont, D.12
Buyse, M.13
Bontempi, G.14
Delorenzi, M.15
Piccart, M.J.16
Sotiriou, C.17
-
8
-
-
44949174768
-
Computational Intelligence in Clinical Oncology- A case study
-
Springer-Verlag Smolinski TG, Milanova MM, Hassanien AE 2008 Applications of computational intelligence in bioinformatics and biomedicine:current trends and open problems
-
Haibe-Kains B Desmedt C Loi S Delorenzi M Sotiriou C Bontempi G Computational Intelligence in Clinical Oncology- a case study Studies in Computational Intelligence Springer-Verlag Smolinski TG, Milanova MM, Hassanien AE 2008 Applications of computational intelligence in bioinformatics and biomedicine:cUrrent trends and open problems
-
(2008)
Studies in Computational Intelligence
-
-
Haibe-Kains, B.1
Desmedt, C.2
Loi, S.3
Delorenzi, M.4
Sotiriou, C.5
Bontempi, G.6
-
9
-
-
33750009273
-
Reliable gene signatures for microarray classification: Assessment of stability and performance
-
10.1093/bioinformatics/btl400 16882647
-
Davis CA Gerick F Hintermair V Friedel CC Fundel K Kuffner R Zimmer R Reliable gene signatures for microarray classification: Assessment of stability and performance Bioinformatics 2006, 22(19):2356-2363. 10.1093/ bioinformatics/btl400 16882647
-
(2006)
Bioinformatics
, vol.22
, Issue.19
, pp. 2356-2363
-
-
Davis, C.A.1
Gerick, F.2
Hintermair, V.3
Friedel, C.C.4
Fundel, K.5
Kuffner, R.6
Zimmer, R.7
-
10
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
10.1093/bioinformatics/19.2.185 12538238
-
Bolstad BM Irizarry RA Astrand M Speed TP A comparison of normalization methods for high density oligonucleotide array data based on variance and bias Bioinformatics 2003, 19(2):185-193. 10.1093/bioinformatics/ 19.2.185 12538238
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
11
-
-
2942578063
-
A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen
-
10.1016/j.ccr.2004.05.015 15193263
-
Ma XJ Wang Z Ryan PD Isakoff SJ Barmettler A Fuller A Muir B Mohapatra G Salunga R Tuggle JT Tran Y Tran D Tassin A Amon P Wang W Enright E Stecker K Estepa-Sabal E Smith B Younger J Balis U Michaelson J Bhan A Habin K Baer TM Brugge J Haber DA Erlander MG Sgroi DC A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen Cancer Cell 2004, 5(6):607-616. 10.1016/ j.ccr.2004.05.015 15193263
-
(2004)
Cancer Cell
, vol.5
, Issue.6
, pp. 607-616
-
-
Ma, X.J.1
Wang, Z.2
Ryan, P.D.3
Isakoff, S.J.4
Barmettler, A.5
Fuller, A.6
Muir, B.7
Mohapatra, G.8
Salunga, R.9
Tuggle, J.T.10
Tran, Y.11
Tran, D.12
Tassin, A.13
Amon, P.14
Wang, W.15
Enright, E.16
Stecker, K.17
Estepa-Sabal, E.18
Smith, B.19
Younger, J.20
Balis, U.21
Michaelson, J.22
Bhan, A.23
Habin, K.24
Baer, T.M.25
Brugge, J.26
Haber, D.A.27
Erlander, M.G.28
Sgroi, D.C.29
more..
-
12
-
-
21444453976
-
Limits of predictive models using microarray data for breast cancer clinical treatment outcome
-
15956654
-
Reid JF Lusa L De Cecco L Coradini D Veneroni S Daidone MG Gariboldi M Pierotti MA Limits of predictive models using microarray data for breast cancer clinical treatment outcome J Natl Cancer Inst 2005, 97(12):927-930. 15956654
-
(2005)
J Natl Cancer Inst
, vol.97
, Issue.12
, pp. 927-930
-
-
Reid, J.F.1
Lusa, L.2
De Cecco, L.3
Coradini, D.4
Veneroni, S.5
Daidone, M.G.6
Gariboldi, M.7
Pierotti, M.A.8
-
13
-
-
20044377912
-
Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling
-
10.1200/JCO.2005.05.145 15681518
-
Jansen MP Foekens JA van Staveren IL Dirkzwager-Kiel MM Ritstier K Look MP Meijer-van Gelder ME Sieuwerts AM Portengen H Dorssers LC Klijn JG Berns EM Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling J Clin Oncol 2005, 23(4):732-740. 10.1200/JCO.2005.05.145 15681518
-
(2005)
J Clin Oncol
, vol.23
, Issue.4
, pp. 732-740
-
-
Jansen, M.P.1
Foekens, J.A.2
van Staveren, I.L.3
Dirkzwager-Kiel, M.M.4
Ritstier, K.5
Look, M.P.6
Meijer-van Gelder, M.E.7
Sieuwerts, A.M.8
Portengen, H.9
Dorssers, L.C.10
Klijn, J.G.11
Berns, E.M.12
-
14
-
-
0348129524
-
CleanEx: A database of heterogeneous gene expression data based on a consistent gene nomenclature
-
308841
-
Praz V Jagannathan V Bucher P CleanEx: A database of heterogeneous gene expression data based on a consistent gene nomenclature Nucleic Acids Res 2004 32 Database issue D542 7 308841 14681477 10.1093/nar/gkh107
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Praz, V.1
Jagannathan, V.2
Bucher, P.3
-
15
-
-
0001143165
-
Problems arising in the analysis of a series of similar experiments
-
Cochrance WG Problems arising in the analysis of a series of similar experiments Journal of the Royal Statistical Society 1937, 4:102-118.
-
(1937)
Journal of the Royal Statistical Society
, vol.4
, pp. 102-118
-
-
Cochrance, W.G.1
-
18
-
-
0344010693
-
RECK is a target of Epstein-Barr virus latent membrane protein 1
-
10.1038/sj.onc.1207157 14614450
-
Liu LT Peng JP Chang HC Hung WC RECK is a target of Epstein-Barr virus latent membrane protein 1 Oncogene 2003, 22(51):8263-8270. 10.1038/ sj.onc.1207157 14614450
-
(2003)
Oncogene
, vol.22
, Issue.51
, pp. 8263-8270
-
-
Liu, L.T.1
Peng, J.P.2
Chang, H.C.3
Hung, W.C.4
-
19
-
-
1542365170
-
Slit protein-mediated inhibition of CXCR4-induced chemotactic and chemoinvasive signaling pathways in breast cancer cells
-
10.1074/jbc.M308083200 14645233
-
Prasad A Fernandis AZ Rao Y Ganju RK Slit protein-mediated inhibition of CXCR4-induced chemotactic and chemoinvasive signaling pathways in breast cancer cells J Biol Chem 2004, 279(10):9115-9124. 10.1074/jbc.M308083200 14645233
-
(2004)
J Biol Chem
, vol.279
, Issue.10
, pp. 9115-9124
-
-
Prasad, A.1
Fernandis, A.Z.2
Rao, Y.3
Ganju, R.K.4
-
20
-
-
2642578233
-
Tamoxifen treatment failure in cancer and the nonlinear dynamics of TGFbeta
-
10.1016/j.jtbi.2004.03.008 15178188
-
Turner S J AS Cameron D Tamoxifen treatment failure in cancer and the nonlinear dynamics of TGFbeta J Theor Biol 2004, 229(1):101-111. 10.1016/ j.jtbi.2004.03.008 15178188
-
(2004)
J Theor Biol
, vol.229
, Issue.1
, pp. 101-111
-
-
Turner, S.J.A.S.1
Cameron, D.2
-
21
-
-
19344375744
-
Semi-supervised methods to predict patient survival from gene expression data
-
387275 15094809 10.1371/journal.pbio.0020108
-
Bair E Tibshirani R Semi-supervised methods to predict patient survival from gene expression data PLoS Biol 2004, 2(4):E108. 387275 15094809 10.1371/journal.pbio.0020108
-
(2004)
PLoS Biol
, vol.2
, Issue.4
-
-
Bair, E.1
Tibshirani, R.2
-
22
-
-
34147177060
-
Averaged gene expressions for regression
-
10.1093/biostatistics/kxl002 16698769
-
Park MY Hastie T Tibshirani R Averaged gene expressions for regression Biostatistics 2007, 8(2):212-227. 10.1093/biostatistics/kxl002 16698769
-
(2007)
Biostatistics
, vol.8
, Issue.2
, pp. 212-227
-
-
Park, M.Y.1
Hastie, T.2
Tibshirani, R.3
-
23
-
-
33645820586
-
Estrogen-regulated genes predict survival in hormone receptor-positive breast cancers
-
10.1200/JCO.2005.03.2755 16505416
-
Oh DS Troester MA Usary J Hu Z He X Fan C Wu J Carey LA Perou CM Estrogen-regulated genes predict survival in hormone receptor-positive breast cancers J Clin Oncol 2006, 24(11):1656-1664. 10.1200/ JCO.2005.03.2755 16505416
-
(2006)
J Clin Oncol
, vol.24
, Issue.11
, pp. 1656-1664
-
-
Oh, D.S.1
Troester, M.A.2
Usary, J.3
Hu, Z.4
He, X.5
Fan, C.6
Wu, J.7
Carey, L.A.8
Perou, C.M.9
-
24
-
-
19944422061
-
A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer
-
10.1056/NEJMoa041588 15591335
-
Paik S Shak S Tang G Kim C Baker J Cronin M Baehner FL Walker MG Watson D Park T Hiller W Fisher ER Wickerham DL Bryant J Wolmark N A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer N Engl J Med 2004, 351(27):2817-2826. 10.1056/NEJMoa041588 15591335
-
(2004)
N Engl J Med
, vol.351
, Issue.27
, pp. 2817-2826
-
-
Paik, S.1
Shak, S.2
Tang, G.3
Kim, C.4
Baker, J.5
Cronin, M.6
Baehner, F.L.7
Walker, M.G.8
Watson, D.9
Park, T.10
Hiller, W.11
Fisher, E.R.12
Wickerham, D.L.13
Bryant, J.14
Wolmark, N.15
|