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Volumn 72, Issue 9, 2008, Pages 2133-2153

A cDNA microarray for the three-spined stickleback, Gasterosteus aculeatus L., and analysis of the interactive effects of oestradiol and dibenzanthracene exposures

Author keywords

cyp1A; Ecotoxicogenomics; Microarray; Oestradiol; Stickleback; Vitellogenin

Indexed keywords

GASTEROSTEUS ACULEATUS;

EID: 44949102186     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2008.01859.x     Document Type: Article
Times cited : (32)

References (43)
  • 1
    • 0029903159 scopus 로고    scopus 로고
    • In vitro modulation of 17-beta-estradiol-induced vitellogenin synthesis: Effects of cytochrome P4501A1 inducing compounds on rainbow trout (Oncorhynchus mykiss) liver cells
    • Anderson, M. J., Miller, M. R. Hinton, D. E 1996). In vitro modulation of 17-beta-estradiol-induced vitellogenin synthesis: effects of cytochrome P4501A1 inducing compounds on rainbow trout (Oncorhynchus mykiss) liver cells. Aquatic Toxicology 34, 327 350.
    • (1996) Aquatic Toxicology , vol.34 , pp. 327-350
    • Anderson, M.J.1    Miller, M.R.2    Hinton, D.E.3
  • 2
    • 34247594279 scopus 로고    scopus 로고
    • Effects of 17α-ethynylestradiol on EROD activity, spiggin and vitellogenin in three-spined stickleback (Gasterosteus aculeatus)
    • Andersson, C., Katsiadaki, I., Lundstedt-Enkel, K. Örberg. J 2007). Effects of 17α-ethynylestradiol on EROD activity, spiggin and vitellogenin in three-spined stickleback (Gasterosteus aculeatus). Aquatic Toxicology 83, 33 42.
    • (2007) Aquatic Toxicology , vol.83 , pp. 33-42
    • Andersson, C.1    Katsiadaki, I.2    Lundstedt-Enkel, K.3    Örberg., J.4
  • 4
    • 0028337817 scopus 로고
    • Suppression of B-cell mediated immunity in juvenile Chinook salmon (Oncorhynchus tshawytscha) after exposure to either a polycyclic aromatic hydrocarbon or to polychlorinated biphenyls
    • Arkoosh, M. R., Clemons, E., Myers, M. Casillas, E 1994). Suppression of B-cell mediated immunity in juvenile Chinook salmon (Oncorhynchus tshawytscha) after exposure to either a polycyclic aromatic hydrocarbon or to polychlorinated biphenyls. Immunopharmacology and Immunotoxicology 16, 293 314.
    • (1994) Immunopharmacology and Immunotoxicology , vol.16 , pp. 293-314
    • Arkoosh, M.R.1    Clemons, E.2    Myers, M.3    Casillas, E.4
  • 6
    • 20444381667 scopus 로고    scopus 로고
    • ER alpha-AHR-ARNT protein-protein interactions mediate estradiol-dependent transrepression of dioxin-inducible gene transcription
    • Beischlag, T. V. Perdew, G. H 2005). ER alpha-AHR-ARNT protein-protein interactions mediate estradiol-dependent transrepression of dioxin-inducible gene transcription. Journal of Biological Chemistry 280, 21607 21611.
    • (2005) Journal of Biological Chemistry , vol.280 , pp. 21607-21611
    • Beischlag, T.V.1    Perdew, G.H.2
  • 7
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y. Hochberg, Y 1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society B 57, 289 300.
    • (1995) Journal of the Royal Statistical Society B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 8
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M 1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72, 248 254.
    • (1976) Analytical Biochemistry , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 9
    • 44749088970 scopus 로고    scopus 로고
    • Construction of subtracted EST and normalized cDNA libraries from liver of chemical-exposed three-spined stickleback (Gasterosteus aculeatus) containing pollutant responsive genes as a resource for transcriptome analysis
    • in press). doi: 10.1016/j.marenvres.2008.02.043
    • Brown, M. M., Williams, T. D., Chipman, J. K., Katsiadaki, I., Sanders, M. Craft, J. A in press). Construction of subtracted EST and normalized cDNA libraries from liver of chemical-exposed three-spined stickleback (Gasterosteus aculeatus) containing pollutant responsive genes as a resource for transcriptome analysis. Marine Environmental Research. doi: 10.1016/j.marenvres.2008.02.043
    • Marine Environmental Research.
    • Brown, M.M.1    Williams, T.D.2    Chipman, J.K.3    Katsiadaki, I.4    Sanders, M.5    Craft, J.A.6
  • 10
    • 0035473464 scopus 로고    scopus 로고
    • Vav proteins, adaptors and cell signaling
    • Bustelo, X. R 2001). Vav proteins, adaptors and cell signaling. Oncogene 20, 6372 6381.
    • (2001) Oncogene , vol.20 , pp. 6372-6381
    • Bustelo, X.R.1
  • 11
    • 0026282427 scopus 로고
    • Inducibility of spawning and reproductive success of female English sole (Parophrys vetulus) from urban and nonurban areas of Puget sound, Washington
    • Casillas, E., Misitano, D., Johnson, L., Rhodes, L., Collier, T. K., Stein, J. E., McCain, B. B. Varanasi, U 1991). Inducibility of spawning and reproductive success of female English sole (Parophrys vetulus) from urban and nonurban areas of Puget sound, Washington. Marine Environmental Research 31, 99 122.
    • (1991) Marine Environmental Research , vol.31 , pp. 99-122
    • Casillas, E.1    Misitano, D.2    Johnson, L.3    Rhodes, L.4    Collier, T.K.5    Stein, J.E.6    McCain, B.B.7    Varanasi, U.8
  • 13
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa, A., Gotz, S., Garcia-Gomez, J. M., Terol, J., Talon, M. Robles, M 2005). Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3674 3676.
    • (2005) Bioinformatics , vol.21 , pp. 3674-3676
    • Conesa, A.1    Gotz, S.2    Garcia-Gomez, J.M.3    Terol, J.4    Talon, M.5    Robles, M.6
  • 14
    • 24044522270 scopus 로고    scopus 로고
    • BioMart and bioconductor: A powerful link between biological databases and microarray data analysis
    • Durinck, S., Moreau, Y., Kasprzyk, A., Davis, S., De Moor, B., Brazma, A. Huber, W 2005). BioMart and bioconductor: a powerful link between biological databases and microarray data analysis. Bioinformatics 21, 3439 3440.
    • (2005) Bioinformatics , vol.21 , pp. 3439-3440
    • Durinck, S.1    Moreau, Y.2    Kasprzyk, A.3    Davis, S.4    De Moor, B.5    Brazma, A.6    Huber, W.7
  • 15
    • 0026526364 scopus 로고
    • Endogenously-mediated, pretranslational suppression of cytochrome P4501A in PCB-contaminated flounder
    • Elskus, A. A., Pruell, R. Stegeman, J. J 1992). Endogenously-mediated, pretranslational suppression of cytochrome P4501A in PCB-contaminated flounder. Marine Environmental Research 32, 97 101.
    • (1992) Marine Environmental Research , vol.32 , pp. 97-101
    • Elskus, A.A.1    Pruell, R.2    Stegeman, J.J.3
  • 16
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing, B. Green, P 1998). Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Research 8, 186 194.
    • (1998) Genome Research , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 17
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., Hillier, L., Wendl, M. C. Green, P 1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Research 8, 175 185.
    • (1998) Genome Research , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 18
    • 0030886806 scopus 로고    scopus 로고
    • Molecular characterization of a ribonucleic acid transcript that is highly up-regulated at the time of ovulation in the brook trout (Salvelinus fontinalis) ovary
    • Garczynski, M. A. Goetz, F. W 1997). Molecular characterization of a ribonucleic acid transcript that is highly up-regulated at the time of ovulation in the brook trout (Salvelinus fontinalis) ovary. Biology of Reproduction 57, 856 864.
    • (1997) Biology of Reproduction , vol.57 , pp. 856-864
    • Garczynski, M.A.1    Goetz, F.W.2
  • 19
    • 9644270260 scopus 로고    scopus 로고
    • The juvenile three-spined stickleback (Gasterosteus aculeatus L.) as a model organism for endocrine disruption II - Kidney hypertrophy, vitellogenin and spiggin induction
    • Hahlbeck, E., Katsiadaki, I., Mayer, I., Adolfsson-Erici, M., James, J. D. Bengtsson, B.-E 2004). The juvenile three-spined stickleback (Gasterosteus aculeatus L.) as a model organism for endocrine disruption II - kidney hypertrophy, vitellogenin and spiggin induction. Aquatic Toxicology 70, 311 326.
    • (2004) Aquatic Toxicology , vol.70 , pp. 311-326
    • Hahlbeck, E.1    Katsiadaki, I.2    Mayer, I.3    Adolfsson-Erici, M.4    James, J.D.5    Bengtsson, B.-E.6
  • 21
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: A DNA sequence assembly program
    • Huang, X. Madan, A 1999). CAP3: a DNA sequence assembly program. Genome Research 9, 868 877.
    • (1999) Genome Research , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 22
    • 0036753282 scopus 로고    scopus 로고
    • The potential of the three-spined stickleback (Gasterosteus aculeatus L.) as a combined biomarker for oestrogens and androgens in European waters
    • Katsiadaki, I., Scott, A. P. Mayer, I 2002a). The potential of the three-spined stickleback (Gasterosteus aculeatus L.) as a combined biomarker for oestrogens and androgens in European waters. Marine Environmental Research 54, 725 728.
    • (2002) Marine Environmental Research , vol.54 , pp. 725-728
    • Katsiadaki, I.1    Scott, A.P.2    Mayer, I.3
  • 23
    • 0036707690 scopus 로고    scopus 로고
    • Detection of environmental androgens: A novel method based on enzyme-linked immunosorbent assay of spiggin, the stickleback (Gasterosteus aculeatus) glue protein
    • Katsiadaki, I., Scott, A. P., Hurst, M. R., Matthiessen, P. Mayer, I 2002b). Detection of environmental androgens: a novel method based on enzyme-linked immunosorbent assay of spiggin, the stickleback (Gasterosteus aculeatus) glue protein. Environmental Toxicology and Chemistry 21, 1946 1954.
    • (2002) Environmental Toxicology and Chemistry , vol.21 , pp. 1946-1954
    • Katsiadaki, I.1    Scott, A.P.2    Hurst, M.R.3    Matthiessen, P.4    Mayer, I.5
  • 24
    • 33847337551 scopus 로고    scopus 로고
    • A sensitive, in vivo test for the detection of environmental anti-androgens, using the three-spined stickleback (Gasterosteus aculeatus)
    • Katsiadaki, I., Morris, S., Squires, C., Hurst, M. R., James, J. D. Scott, A. P 2006). A sensitive, in vivo test for the detection of environmental anti-androgens, using the three-spined stickleback (Gasterosteus aculeatus). Environmental Health Perspectives 114 (Suppl. 1) 115 121.
    • (2006) Environmental Health Perspectives , vol.1141 , pp. 115-121
    • Katsiadaki, I.1    Morris, S.2    Squires, C.3    Hurst, M.R.4    James, J.D.5    Scott, A.P.6
  • 26
    • 8844230989 scopus 로고    scopus 로고
    • LUCY2: An interactive DNA sequence quality trimming and vector removal tool
    • Li, S. Chou, H. H 2004). LUCY2: an interactive DNA sequence quality trimming and vector removal tool. Bioinformatics 20, 2865 2866.
    • (2004) Bioinformatics , vol.20 , pp. 2865-2866
    • Li, S.1    Chou, H.H.2
  • 27
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
    • Livak, K. J. Schmittgen, T. D 2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25, 402 408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 29
    • 0035930401 scopus 로고    scopus 로고
    • Estrogen-mediated suppression of cytochrome P4501A (cyp1A) expression in rainbow trout hepatocytes: Role of estrogen receptor
    • Navas, J. M. Segner, H 2001). Estrogen-mediated suppression of cytochrome P4501A (cyp1A) expression in rainbow trout hepatocytes: role of estrogen receptor. Chemico-Biological Interactions 138, 285 298.
    • (2001) Chemico-Biological Interactions , vol.138 , pp. 285-298
    • Navas, J.M.1    Segner, H.2
  • 30
    • 0028942988 scopus 로고
    • Influence of oestradiol on induction of EROD activity in roach (Rutilus rutilus L.)
    • O'Hare, D., Siddall, R., Robotham, P. W. J. Gill, R. A 1995). Influence of oestradiol on induction of EROD activity in roach (Rutilus rutilus L.). Chemosphere 30, 1423 1428.
    • (1995) Chemosphere , vol.30 , pp. 1423-1428
    • O'Hare, D.1    Siddall, R.2    Robotham, P.W.J.3    Gill, R.A.4
  • 31
    • 0001277880 scopus 로고
    • Vitellogenin in winter flounder (Pleuronectes americanus) from Long Island Sound and Boston Harbor
    • Pereira, J. J., Ziskowski, J., Mercaldo-Allen, R., Kuropat, C., Luedke, D. Gould, E 1992). Vitellogenin in winter flounder (Pleuronectes americanus) from Long Island Sound and Boston Harbor. Estuaries 15, 289 297.
    • (1992) Estuaries , vol.15 , pp. 289-297
    • Pereira, J.J.1    Ziskowski, J.2    Mercaldo-Allen, R.3    Kuropat, C.4    Luedke, D.5    Gould, E.6
  • 32
    • 0037435395 scopus 로고    scopus 로고
    • Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
    • Ramakers, C., Ruijter, J. M., Deprez, R. H. Moorman, A. F 2003). Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neuroscience Letters 339, 62 66.
    • (2003) Neuroscience Letters , vol.339 , pp. 62-66
    • Ramakers, C.1    Ruijter, J.M.2    Deprez, R.H.3    Moorman, A.F.4
  • 33
    • 33645852243 scopus 로고    scopus 로고
    • The effects of polycyclic aromatic hydrocarbons on the immune system of fish: A review
    • Reynaud, S. Deschaux, P 2006). The effects of polycyclic aromatic hydrocarbons on the immune system of fish: a review. Aquatic Toxicology 77, 229 238.
    • (2006) Aquatic Toxicology , vol.77 , pp. 229-238
    • Reynaud, S.1    Deschaux, P.2
  • 34
    • 0041307080 scopus 로고    scopus 로고
    • Inhibitory aryl hydrocarbon receptor-estrogen receptor alpha cross-talk and mechanisms of action
    • Safe, S. Wormke, M 2003). Inhibitory aryl hydrocarbon receptor-estrogen receptor alpha cross-talk and mechanisms of action. Chemical Research in Toxicology 16, 807 816.
    • (2003) Chemical Research in Toxicology , vol.16 , pp. 807-816
    • Safe, S.1    Wormke, M.2
  • 35
    • 0032538792 scopus 로고    scopus 로고
    • Phosphorylation-dependent and constitutive activation of Rho proteins by wild-type and oncogenic Vav-2
    • Schuebel, K. E., Movilla, N., Rosa, J. L. Bustelo, X. R 1998). Phosphorylation-dependent and constitutive activation of Rho proteins by wild-type and oncogenic Vav-2. EMBO Journal 17, 6608 6621.
    • (1998) EMBO Journal , vol.17 , pp. 6608-6621
    • Schuebel, K.E.1    Movilla, N.2    Rosa, J.L.3    Bustelo, X.R.4
  • 37
    • 0032928063 scopus 로고    scopus 로고
    • Purification, characterization, and molecular cloning of carp hyosophorin
    • Tsao, C. C., Huang, F. L. Chang, Y. S 1999). Purification, characterization, and molecular cloning of carp hyosophorin. Molecular Reproduction and Development 52, 288 296.
    • (1999) Molecular Reproduction and Development , vol.52 , pp. 288-296
    • Tsao, C.C.1    Huang, F.L.2    Chang, Y.S.3
  • 38
    • 0042433120 scopus 로고    scopus 로고
    • A DNA expression array to detect toxic stress response in European flounder (Platichthys flesus)
    • Williams, T. D., Gensberg, K., Minchin, S. D. Chipman, J. K 2003). A DNA expression array to detect toxic stress response in European flounder (Platichthys flesus). Aquatic Toxicology 65, 141 157.
    • (2003) Aquatic Toxicology , vol.65 , pp. 141-157
    • Williams, T.D.1    Gensberg, K.2    Minchin, S.D.3    Chipman, J.K.4
  • 40
    • 33846250858 scopus 로고    scopus 로고
    • Gene expression responses of European flounder (Platichthys flesus) to 17-beta estradiol
    • Williams, T. D., Diab, A. M., George, S. G., Sabine, V. Chipman, J. K 2007). Gene expression responses of European flounder (Platichthys flesus) to 17-beta estradiol. Toxicology Letters 168, 236 248.
    • (2007) Toxicology Letters , vol.168 , pp. 236-248
    • Williams, T.D.1    Diab, A.M.2    George, S.G.3    Sabine, V.4    Chipman, J.K.5
  • 41
    • 0034726057 scopus 로고    scopus 로고
    • Crosstalk between estrogen receptor alpha and the aryl hydrocarbon receptor in breast cancer cells involves unidirectional activation of proteasomes
    • Wormke, M., Stoner, M., Saville, B. Safe, S 2000). Crosstalk between estrogen receptor alpha and the aryl hydrocarbon receptor in breast cancer cells involves unidirectional activation of proteasomes. FEBS Letters 478, 109 112.
    • (2000) FEBS Letters , vol.478 , pp. 109-112
    • Wormke, M.1    Stoner, M.2    Saville, B.3    Safe, S.4
  • 43
    • 33846117134 scopus 로고    scopus 로고
    • The signaling mechanism of ROS in tumor progression
    • Wu, W. S 2006). The signaling mechanism of ROS in tumor progression. Cancer and Metastasis Reviews 25, 695 705.
    • (2006) Cancer and Metastasis Reviews , vol.25 , pp. 695-705
    • Wu, W.S.1


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