The dynamics of soil bacterial community structure in response to yearly repeated agricultural copper treatments

Research in Microbiology

Volumn 159, Issue 4, 2008, Pages 251-254

  Ranjard, Lionel ^a   Nowak, Virginie ^a   Echairi, Abdelwahad ^a   Faloya, Vincent ^b   Chaussod, Rémi ^a  

^a UNIVERSITÉ DE BOURGOGNE   (France)

^b Domaine Expérimental d'Epoisses   (France)

Author keywords

ARISA fingerprinting; Bacterial community; Copper impact; Field experiment

Indexed keywords

COPPER;

AGRICULTURE; ARTICLE; BACTERIAL GENOME; DNA FINGERPRINTING; PRIORITY JOURNAL; SOIL ANALYSIS; SOIL MICROFLORA; SOIL POLLUTION;

BACTERIA; COPPER; ECOSYSTEM; SOIL; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

BACTERIA (MICROORGANISMS);

EID: 44649127567     PISSN: 09232508     EISSN: 17697123     Source Type: Journal    
DOI: 10.1016/j.resmic.2008.02.004     Document Type: Article

References (17)

1. Bourrelier P.H., and Berthelin J. Contamination des sols par les éléments en traces: les risques et leur gestion. Rapport de l'Académie des Sciences 42 (1998) 156-165
2. Doelman P.E., Jansen S., Michels S.M., and Vantil M. Effects of heavy-metals in soil on microbial diversity and activity as shown by the sensitivity-resistance index, an ecologically relevant parameter. Biology and Fertility of Soils 17 (1994) 177-184
3. Frostegard Å., Tunlid A., and Bååth E. Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Applied and Environmental Microbiology 59 (1993) 3605-3617
4. Giller K.E., Witler E., and Mc Grath S.P. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biology and Biochemistry 30 (1998) 1389-1414
5. Gremion F., Chatzinotas A., and Harms H. Comparative 16S rDNA and 16S rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil. Environmental Microbiology 5 (2003) 896-907
6. Ives A.R., and Carpenter S.R. Stability and diversity of ecosystems. Science 317 (2007) 58-62
7. Keller C., and Vedy J. Distribution of copper and cadmium fractions in two forest soils. Journal of Environmental Quality 23 (1994) 987-999
8. Kunito T., Nagaoka K., Tada N., Saeki K., Senoo K., Oyaizu H., et al. Characterization of Cu-resistant bacterial communities in Cu-contaminated soils. Soil Science and Plant Nutrition 43 (1997) 709-717
9. Lejon D.P.H., Nowak V., Bouko S., Pascault N., Mougel C., and Ranjard L. Fingerpinting and diversity of bacterial copA genes according to soil organic status and copper contamination. FEMS Microbiology Ecology 61 (2007) 424-437
10. Odum E.P. The effects of stress on the trajectory of ecological succession. In: Barrett G.W., and Rosenberg R. (Eds). Stress effects on natural ecosystems (1981), John Wiley & Sons Ltd 43-47
11. Ranjard L., Echairi A., Nowak V., Lejon D.P.H., Nouaïm R., and Chaussod R. Field and microcosm experiments to evaluate the effects of agricultural copper treatment on the density and genetic structure of microbial communities in two different soils. FEMS Microbiology Ecology 58 (2006) 303-315
12. Ranjard L., Lignier L., and Chaussod R. Cumulative effects of short-term polymetal contamination on soil bacterial community structure. Applied and Environmental Microbiology 72 (2006) 1684-1687
13. Ranjard L., Poly F., Combrisson J., Richaume A., Gourbiere F., Thioulouse J., et al. Heterogeneous cell density and genetic structure of bacterial pools associated with various soil microenvironments as determined by enumeration and DNA fingerprinting approach (RISA). Microbial Ecology 39 (2000) 263-272
14. Thioulouse J., Chessel D., Dolédec S., and Olivier J.M. ADE-4: a multivariate analysis and graphical display software. Statistical Computing 7 (1997) 75-83
15. Tobor-Kaplon M.A., Bloem J., Romkens P.F.A.M., and de Ruiter P.C. Functional stability of microbial communities in contaminated soils. Oikos 111 (2005) 119-129
16. Tom-Petersen A., Leser T., Marsh T.L., and Nybroe O. Effects of copper amendment on the bacterial community in agricultural soil analysed by the T-RFLP technique. FEMS Microbiology Ecology 46 (2003) 53-62
17. Zelenev V.V., van Bruggen A.H.C., and Semenov A.M. Short-term wavelike dynamics of bacterial populations in response to nutrient input from fresh plant residues. Microbial Ecology 49 (2005) 83-93