Evaluation of gene index for identification of Byssochlamys spp.

Journal of the Food Hygienic Society of Japan

Volumn 49, Issue 2, 2008, Pages 82-87

  Watanabe, Maiko ^a   Kato, Yuko ^b   Togami, Keiko ^c   Yamanaka, Mikiko ^c   Wakabayashi, Keiko ^b   Ogawa, Hiroyuki ^b   Wasada, Yuko ^b   Goto, Keiichi ^b   Hara Kudo, Yukiko ^d   Amano, Norihide ^c   Yokota, Akira ^e  

^a TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

^b Mitsui Norin Co Ltd   (Japan)

^c SUNTORY LTD   (Japan)

^d NATIONAL INSTITUTE OF HEALTH SCIENCES   (Japan)

^e UNIVERSITY OF TOKYO   (Japan)

Author keywords

18S rRNA 18S rRNA gene; 26 28S rRNA; 26 28S rRNA gene D2 region; Byssochlamys; D2; Heat resistant mould; Identification; Lys2; Molecular phylogenetic analysis; Paecilomyces; Talaromyces; Thermoascus

Indexed keywords

2 AMINOADIPIC ACID; FUNGAL RNA; RNA 18S; RNA 28S;

ARTICLE; ASCOMYCETES; CLASSIFICATION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; PHYLOGENY; SEQUENCE ANALYSIS;

2-AMINOADIPIC ACID; ASCOMYCOTA; PHYLOGENY; RNA, FUNGAL; RNA, RIBOSOMAL, 18S; RNA, RIBOSOMAL, 28S; SEQUENCE ANALYSIS, DNA; SEQUENCE ANALYSIS, RNA;

BYSSOCHLAMYS; TALAROMYCES; THERMOASCUS;

EID: 44649085520     PISSN: 00156426     EISSN: None     Source Type: Journal    
DOI: 10.3358/shokueishi.49.82     Document Type: Article

References (18)

1. Samson, R. A., Hocking, A. D., Pitt, J. I., King, A. D. Modern Methods in Food Mycology. Amsterdam, Netherlands, Elsevier, 1992.
2. Udagawa, S. Heat resistant molds, a specific topic on food and beverage mycology. Mycotoxins, 50, 3-11 (2000).
3. Virginia, N. S., Dane, T. B. Heat resistance of Talaromyces flavus and Neosartorya fischeri isolated from commercial fruit juices. J. Food Protect., 50, 18-20 (1987).
4. Massimo, L. A. C., Matasci, F., Schmidt-Lorenz, W. Influence of age, growth medium, and temperature on heat resistance of Byssochlamys nivea ascospores. Lebensmittel-Wissenchaft und Technologie, 23, 404-411 (1990).
5. Suresh, E. R., Ethiraj, S., Jayaram, H. L. Heat resistance of Neosartorya fischeri isolated from grapes. J. Food Sci. Technol., 33, 76-78 (1996).
6. Aoyama, F. Identification of reat resistance fungi in fruit juice based on DNA sequence analysis. Kajyu Kyoukai Hou, 569, 4-15 (2006).
7. Pitt, J. I., Hocking, A. D. Fungi and food spoilage, 2nd ed. New York, USA, Blackie Academic & Professional, 1997.
8. Sakai, A., Kawakami. K., Takatori, K., Saito, Y. Foods with complaints of fungal contamination and physical problems caused by their ingestion. Syokuhin Eiseigaku Zasshi (J. Food Hyg. Soc. Japan), 45, 201-206 (2004).
9. Samson, R. A., Hoekstra, E. S., Frisvad, J. C. eds. Introduction to food-and airborne fungi, 7th ed. Utrecht, Netherland, CBS, 2004.
10. Peterson, S. W., Kurtzman, C. P. Ribosomal RNA sequence divergence among sibling species of yeasts. System. Appl. Microbiol., 14, 124-129 (1991).
11. Sugita, T., Nishikawa, A., Ikeda, R., Shinoda, T. Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification. J. Clin. Microbiol., 37, 1985-1993 (1999).
12. Sugita, T., Nishikawa, A. Molecular taxonomy and identification of pathogenic fungi based on DNA Sequence analysis. Jpn. J. Med. Mycol., 45, 55-58 (2004).
13. Nishida, H., Nishiyama, M. What is characteristic of fungal lysine synthesis through the alpha-amino-adipate pathway? J. Mol. Evol., 51, 299-302 (2000).
14. An, K. D., Nishida, H., Miura, Y., Yokota, A. Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses. BMC Evol. Biol., 2, 6 (2002).
15. Luangsa-ard, J., Hywel-Jones, N. L., Samson, R. A. The polyphyletic nature of Paecilomyces sensu lato based on 18S-generated rDNA phylogeny. Mycologia, 96, 773-780 (2004).
16. Saitou, N., Nei, M. The Neighbor-Joining method: a new method for reconstruction phylogenetic trees. Mol. Biol. Evol., 4, 406-425 (1987).
17. Thompson, J. D., Higgins, D. G., Gibson, T. J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence weighing, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 76, 4350-4354 (1994).
18. Kimura, M. A simple method for estimation evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol., 16, 111-120 (1980).