Phylogenetic analysis of betanodavirus RNA2 identified from wild marine fish in oceanic regions

Fish Pathology

Volumn 43, Issue 1, 2008, Pages 19-27

  Sakamoto, Takahiro ^a   Okinaka, Yasushi ^a   Mori, Koh Ichiro ^b   Sugaya, Takuma ^b   Nishioka, Toyohiro ^b   Oka, Masakazu ^c   Yamashita, Hiroshi ^d   Nakai, Toshihiro ^a  

^a HIROSHIMA UNIVERSITY   (Japan)

^b FISHERIES RESEARCH AGENCY   (Japan)

^c JAPAN FISHERIES RESEARCH AND EDUCATION AGENCY   (Japan)

^d Ehime Prefectural Fisheries Experimental Station   (Japan)

Author keywords

Betanodavirus; Coat protein gene; Phylogenetic analysis; Viral nervous necrosis

Indexed keywords

BETANODAVIRUS; CLUPEIDAE; DUSSUMIERIINAE; ETRUMEUS TERES; REDSPOTTED GROUPER NERVOUS NECROSIS VIRUS; STRIPED JACK NERVOUS NECROSIS VIRUS;

EID: 44449174505     PISSN: 0388788X     EISSN: None     Source Type: Journal    
DOI: 10.3147/jsfp.43.19     Document Type: Article

References (26)

1. Curtis P. A., M. Drawbridge, T. Iwamoto, T. Nakai, R. P. Hedrick and A. P. Gendron (2001): Nodavirus infection of juvenile white seabass, Atractoscion nobilis, cultured in southern California: first record of viral nervous necrosis (VNN) in North America. J. Fish Dis., 24, 263-271.
2. Cutrín, J. M., C. P. Dopazo, R. Thiéry, P. Leao, J. G. Olveira, J. L. Barja and I. Bandín (2007): Emergence of pathogenic betanodaviruses belonging to the SJNNV genogroup in farmed fish species from the Iberian Peninsula. J. Fish Dis., 30, 225-232.
3. Delsert C., N. Morin and M. Comps (1997): Fish nodavirus lytic cycle and semipermissive expression in mammalian and fish cell cultures. J. Virol., 71, 5673-5677.
4. Felsenstein, J. (2002): PHYLIP: Phylogeny Inference Package, Version 3.6. University of Washington, Seattle, WA.
5. Frerichs, G. N., H. D. Rodger and Z. Peric (1996): Cell culture isolation of piscine neuropathy nodavirus from juvenile sea bass, Dicentrarchus labrax. J. Gen. Virol. 77, 2067-2071.
6. Furusawa, R., Y. Okinaka, K. Uematsu and T. Nakai (2007): Screening of freshwater fish species for their susceptibility to a betanodavirus. Dis. Aquat. Org., 77, 119-125.
7. Gomez, D. K., J. Sato, K. Mushiake, T. Isshiki, Y. Okinaka and T. Nakai (2004): PCR-based detection of betanodaviruses from cultured and wild marine fish with no clinical signs. J. Fish Dis., 27, 603-608.
8. Iwamoto T., K. Mori, M. Arimoto and T. Nakai (1999): High permissivity of the fish cell line SSN-1 for piscine nodaviruses. Dis. Aquat. Org., 39, 37-47.
9. Iwamoto, T., T. Nakai, K. Mori, M. Arimoto and I. Furusawa (2000): Cloning of the fish cell line SSN-1 for piscine nodaviruses. Dis. Aquat. Org., 43, 81-89.
10. Iwamoto, T., K. Mise, K. Mori, M. Arimoto, T. Nakai and T. Okuno (2001): Establishment of an infectious RNA transcription system for Striped jack nervous necrosis virus, the type species of the betanodaviruses. J. Gen. Virol., 82, 2653-2662.
11. Iwamoto, T., Y. Okinaka, K. Mise, K. Mori, M. Arimoto, T. Okuno and T. Nakai (2004): Identification of host-specificity determinants in betanodaviruses by using reassortants between striped jack nervous necrosis virus and sevenband grouper nervous necrosis virus. J. Virol., 78, 1256-1262.
12. Iwamoto, T., K. Mise, A. Takeda, Y. Okinaka, K. Mori, M. Arimoto, T. Okuno and T. Nakai (2005): Characterization of Striped jack nervous necrosis virus subgenomic RNA3 and biological activities of its encoded protein B2. J. Gen. Virol., 86, 2807-2816.
13. Johansen, R., I. Sommerset, B. Tørud, K. Korsnes, M. J. Hjortaas, F. Nilsen, A. H. Nerland and B. H. Dannevig (2004): Characterization of nodavirus and viral encephalopathy and retinopathy in farmed turbot, Scophthalmus maximus (L). J. Fish Dis., 27, 591-601.
14. Mori, K., T. Nakai, K. Muroga, M. Arimoto, K. Mushiake and I. Furusawa. (1992): Properties of a new virus belonging to nodaviridae found in larval striped jack (Pseudocaranx dentex) with nervous necrosis. Virology, 187, 368-371.
15. Munday, B. L., J. Kwang and N. Moody (2002): Betanodavirus infections of teleost fish. J. Fish Dis., 25, 127-142.
16. Muroga, K. (2001): Viral and bacterial diseases of marine fish and shellfish in Japanese hatcheries. Aquaculture, 202, 23-44.
17. Nishizawa, T., M. Furuhashi, T. Nagai, T. Nakai and K. Muroga (1997): Genomic classification of fish nodaviruses by molecular phylogenetic analysis of the coat protein gene. Appl. Environ. Microbiol., 63, 1633-1636.
18. Office International des Epizooties OIE (2006): Viral encephalopathy and retinopathy. In: Manual of Diagnostic Tests for Aquatic Animals, pp. 169-175. OIE, Paris.
19. Scholtissek, C. (1995): Molecular evolution of influenza viruses. Virus Genes, 11, 209-215.
20. Skliris G. P., J. V. Krondiris, D. C. Sideris, A. P. Shinn, W. G. Starkey and R. H. Richards (2001): Phylogenetic and antigenic characterization of new fish nodavirus isolates from Europe and Asia. Virus Res., 75, 59-67.
21. Tamura, K. (1999): TreeExplorer for Windows, version 2.12. Tokyo Metropolitan University, Tokyo.
22. Tan, C., B. Huang, S. F. Chang, G. H. Ngoh, B. Munday, S. C. Chen and J. Kwang (2001): Determination of the complete nucleotide sequences of RNA1 and RNA2 from greasy grouper (Epinephelus tauvina) nervous necrosis virus, Singapore strain. J. Gen. Virol., 82, 647-653.
23. Tanaka S., K. Mori, M. Arimoto, T. Iwamoto and T. Nakai (2001): Protective immunity of sevenband grouper, Epinephelus septemfasciatus Thunberg, against experimental viral nervous necrosis. J. Fish Dis., 24, 15-22.
24. Thiéry, R., J. Cozien, de. C. Boisséson, S. Kerbart-Boscher and L. Névarez (2004): Genomic classification of new betanodavirus isolates by phylogenetic analysis of the coat protein gene suggests a low host-fish species specificity. J. Gen. Virol., 85, 3079-3087.
25. Toffolo, V., E. Negrisolo, C. Maltese, G. Bovo, P. Belvedere, L. Colombo and L. D. Valle (2006): Phylogeny of betanodaviruses and molecular evolution of their RNA polymerase and coat proteins. Mol. Phylogenet. Evol., 43, 298-308.
26. Yuasa K., I. Koesharyani, D. Roza, K. Mori, M. Katata and T. Nakai (2002): Immune response of humpback grouper, Cromileptes altivelis (Valenciennes) injected with the recombinant coat protein of betanodvirus. J. Fish Dis., 25, 53-56.