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Volumn 48, Issue 4, 2008, Pages 910-917

Enhancement of ordinal CoMFA by ridge logistic partial least squares

Author keywords

[No Author keywords available]

Indexed keywords

BIOACTIVITY; DATABASE SYSTEMS; LEAST SQUARES APPROXIMATIONS; MATHEMATICAL MODELS; REGRESSION ANALYSIS; THREE DIMENSIONAL;

EID: 44449086985     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci700444z     Document Type: Article
Times cited : (3)

References (23)
  • 1
    • 34447521097 scopus 로고
    • Correlation of Biological Activity of Phenoxyacetic Acids with Hammett Substituent Constants and Partition Coefficients
    • Hansch, C.; Maloney, P. P.; Fujita, T.; Muir, R. M. Correlation of Biological Activity of Phenoxyacetic Acids with Hammett Substituent Constants and Partition Coefficients. Nature 1982, 197, 178-180.
    • (1982) Nature , vol.197 , pp. 178-180
    • Hansch, C.1    Maloney, P.P.2    Fujita, T.3    Muir, R.M.4
  • 2
    • 0023751431 scopus 로고
    • Comparative Molecular Field Analysis (CoMFA). 1, Effect of Shape on Binding of Steroids to Carrier Proteins
    • Cramer, R. D.; Patterson, D. E.; Bunce, J. D. Comparative Molecular Field Analysis (CoMFA). 1, Effect of Shape on Binding of Steroids to Carrier Proteins. J. Am. Chem. Soc. 1988, 110, 5959-5967.
    • (1988) J. Am. Chem. Soc , vol.110 , pp. 5959-5967
    • Cramer, R.D.1    Patterson, D.E.2    Bunce, J.D.3
  • 4
    • 0001461342 scopus 로고
    • The Incidence of Monotone Likelihood in the Cox Model
    • Bryson, M. C.; Johnson, M. E. The Incidence of Monotone Likelihood in the Cox Model. Technometrics 1981, 23, 381-383.
    • (1981) Technometrics , vol.23 , pp. 381-383
    • Bryson, M.C.1    Johnson, M.E.2
  • 5
    • 0002662712 scopus 로고
    • On the Existence of Maximum Likelihood Estimates in Logistic Regression Models
    • Albert, A.; Anderson, J. A. On the Existence of Maximum Likelihood Estimates in Logistic Regression Models. Biometrika 1984, 71, 1-10.
    • (1984) Biometrika , vol.71 , pp. 1-10
    • Albert, A.1    Anderson, J.A.2
  • 6
    • 0037199788 scopus 로고    scopus 로고
    • A Solution to the Problem of Separation in Logistic Regression
    • Heinze, G.; Schemper, M. A Solution to the Problem of Separation in Logistic Regression. Stat. Med. 2002, 21, 2409-2419.
    • (2002) Stat. Med , vol.21 , pp. 2409-2419
    • Heinze, G.1    Schemper, M.2
  • 7
    • 16344365619 scopus 로고    scopus 로고
    • Classification Using Partial Least Squares with Penalized Logistic Regression
    • Fort, G.; Lacroix, S. L. Classification Using Partial Least Squares with Penalized Logistic Regression. Bioinformatics 2005, 21, 1104-1111.
    • (2005) Bioinformatics , vol.21 , pp. 1104-1111
    • Fort, G.1    Lacroix, S.L.2
  • 8
    • 0000521473 scopus 로고
    • Ridge Estimators in Logistic Regression
    • Cessie, S. L.; Van Houwelingen, J. C. Ridge Estimators in Logistic Regression. Appl. Stat. 1992, 41, 191-201.
    • (1992) Appl. Stat , vol.41 , pp. 191-201
    • Cessie, S.L.1    Van Houwelingen, J.C.2
  • 11
    • 0542380422 scopus 로고    scopus 로고
    • The CoMFA Steroids as A Benchmark Dataset for Development of 3D QSAR Methods
    • Coats, E. A. The CoMFA Steroids as A Benchmark Dataset for Development of 3D QSAR Methods. Perspect. Drug Discovery Des. 1998, 12/13/14, 199-213.
    • (1998) Perspect. Drug Discovery Des , vol.12-13 , Issue.14 , pp. 199-213
    • Coats, E.A.1
  • 12
    • 0035263421 scopus 로고    scopus 로고
    • QSAR Study of Steroid Benchmark and Dipepudes Based on MEDV-13
    • Liu, S. S.; Yin, C. S.; Li, Z. L.; Cai, S. X. QSAR Study of Steroid Benchmark and Dipepudes Based on MEDV-13. J. Chem. Inf. Comput. Sci. 2001, 41, 321-329.
    • (2001) J. Chem. Inf. Comput. Sci , vol.41 , pp. 321-329
    • Liu, S.S.1    Yin, C.S.2    Li, Z.L.3    Cai, S.X.4
  • 13
    • 4043144227 scopus 로고    scopus 로고
    • Polanski, J.; Gieleciak, R.; Magdziarz, T.; Bak, A. GRID Formalism for the Comparative Molecular Surface Analysis: Application to the CoMFA Benchmark Steroids, Azo Dyes, and HEPT Derivatives. J. Chem. Inf. Comput. Sci. 2004, 44, 1423-1435.
    • Polanski, J.; Gieleciak, R.; Magdziarz, T.; Bak, A. GRID Formalism for the Comparative Molecular Surface Analysis: Application to the CoMFA Benchmark Steroids, Azo Dyes, and HEPT Derivatives. J. Chem. Inf. Comput. Sci. 2004, 44, 1423-1435.
  • 15
    • 32944473223 scopus 로고    scopus 로고
    • Atom-based 3D-Chiral Quadratic Indices. Part 2: Prediction of the Corticosteroid-Binding Globulinbinding Affinity of the 31 Benchmark Steroids Data Set
    • Castillo-Garit, J. A.; Ponce, Y. M.; Torrens, F. Atom-based 3D-Chiral Quadratic Indices. Part 2: Prediction of the Corticosteroid-Binding Globulinbinding Affinity of the 31 Benchmark Steroids Data Set. Bio. Med. Chem. 2006, 14, 2398-2408.
    • (2006) Bio. Med. Chem , vol.14 , pp. 2398-2408
    • Castillo-Garit, J.A.1    Ponce, Y.M.2    Torrens, F.3
  • 17
    • 6044244849 scopus 로고    scopus 로고
    • A Comparison of Methods for Modeling Quantitative Structure-Activity Relationships
    • Sutherland, J. J.; O'Brien, L. A.; Weaver, D. F. A Comparison of Methods for Modeling Quantitative Structure-Activity Relationships. J. Med. Chem. 2004, 47, 5541-5554.
    • (2004) J. Med. Chem , vol.47 , pp. 5541-5554
    • Sutherland, J.J.1    O'Brien, L.A.2    Weaver, D.F.3
  • 18
    • 0002178053 scopus 로고
    • Bias Reduction of Maximum Likelihood Estimates
    • Firth, D. Bias Reduction of Maximum Likelihood Estimates. Biometrika 1993, 80, 27-38.
    • (1993) Biometrika , vol.80 , pp. 27-38
    • Firth, D.1
  • 19
    • 33845481812 scopus 로고    scopus 로고
    • Variable Selection for Logistic Regression Using a Prediction-Focused Information Criterion
    • Claeskens, G.; Croux, C.; Kerckhoven, J. V. Variable Selection for Logistic Regression Using a Prediction-Focused Information Criterion. Biometrics 2006, 62, 972-979.
    • (2006) Biometrics , vol.62 , pp. 972-979
    • Claeskens, G.1    Croux, C.2    Kerckhoven, J.V.3
  • 20
    • 35748946026 scopus 로고    scopus 로고
    • Corticosteroid-Binding Globulin, A Structural Basis for Steroid Transport and Proteinase-Triggered Release
    • Klieber, M. A.; Underhill, C.; Hammond, G. L.; Muller, Y. A. Corticosteroid-Binding Globulin, A Structural Basis for Steroid Transport and Proteinase-Triggered Release. J. Biol. Chem. 2007, 282, 29594-29603.
    • (2007) J. Biol. Chem , vol.282 , pp. 29594-29603
    • Klieber, M.A.1    Underhill, C.2    Hammond, G.L.3    Muller, Y.A.4
  • 21
    • 0033103478 scopus 로고    scopus 로고
    • Three-dimensional Structure of a Complex of E2020 with Acetylcholinesterase from Torpedo californica
    • Kryger, G.; Silman, I.; Sussman, J. L. Three-dimensional Structure of a Complex of E2020 with Acetylcholinesterase from Torpedo californica. Structure 1999, 7, 297-307.
    • (1999) Structure , vol.7 , pp. 297-307
    • Kryger, G.1    Silman, I.2    Sussman, J.L.3
  • 22
    • 34247208582 scopus 로고    scopus 로고
    • Modeling Robust QSAR. 2. Interative Variable Elimination Schemes for CoMSA: Application for Modeling Benzoic Acid pKa Values
    • Gieleciak, R.; Polanski, J. Modeling Robust QSAR. 2. Interative Variable Elimination Schemes for CoMSA: Application for Modeling Benzoic Acid pKa Values. J. Chem. Inf. Model. 2007, 47, 547-556.
    • (2007) J. Chem. Inf. Model , vol.47 , pp. 547-556
    • Gieleciak, R.1    Polanski, J.2
  • 23
    • 0015947870 scopus 로고
    • Discriminant Analysis of the Relationship between Physical Properties and the Inhibition of Monoamine Oxidase by Aminotetralins and Aminoindans
    • Martin, Y. C.; Holland, J. B.; Jarboe, C. H.; Plotnikoff, N. Discriminant Analysis of the Relationship between Physical Properties and the Inhibition of Monoamine Oxidase by Aminotetralins and Aminoindans. J. Med. Chem. 1974, 17, 409-413.
    • (1974) J. Med. Chem , vol.17 , pp. 409-413
    • Martin, Y.C.1    Holland, J.B.2    Jarboe, C.H.3    Plotnikoff, N.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.