An applied fingerprinting system for cultivated potato using simple sequence repeats

American Journal of Potato Research

Volumn 81, Issue 4, 2004, Pages 243-250

  Coombs, Joseph J ^a   Frank, Lynn M ^a   Douches, David S ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

Microsatellite; Solanum tuberosum; SSR; Tetraploid; Variety identification

Indexed keywords

SOLANUM; SOLANUM TUBEROSUM; TRANSPOSONS;

EID: 4444383442     PISSN: 1099209X     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02871765     Document Type: Conference Paper

References (14)

1. Ashkenazi V, E Chani, U Lavi, D Levy, J Hillel, and RE Veilleux. 2001. Development of microsatellite markers in potato and their use in phylogenetic and fingerprinting analyses. Genome 44:50-62.
2. Demeke T, LM Kawchuk, and DB Lynch. 1993. Identification of potato cultivars and clonal variants by random amplified polymorphic DNA analysis. Am Potato J 70:561-570.
3. Douches DS, and K Ludlam. 1991. Electrophoretic characterization of North American potato cultivars. Am Potato J 68:766-780.
4. Gebhardt C, C Blomendahl, U Schachtschabel, T Debener, F Salamini, and E Ritter. 1989. Identification of 2n breeding lines and 4n potato verities (Solanum tuberosum, ssp. tuberosum) with RFLP-fingerprints. Theor Appl Genet 78:16-22.
5. Ghislain M, F Rodríguez, F Villamón, J Núñez, R Waugh, and M Bonierbale. 2000. Establishment of microsatellite assays for potato genetic identification. Research on Potato. CIP Program Report 1999-2000. pp. 167-174.
6. Hamester W, and U Hils (eds). 2003. World Catalogue of Potato Varieties. Que Pub., Indianapolis, IN.
7. Kawchuk LM, DR Lynch, J Thomas, B Penner, D Sillito, and F Kulcsar. 1996. Characterization of Solanum tuberosum simple sequence repeats and application to potato cultivar identification. Am Potato J 73:325-335.
8. McGregor CE, CA Lambert, MM Greyling, JH Louw, and L Warnich. 2000. A comparative assessment of DNA fingerprinting techniques (RAPD, ISSR, AFLP, and SSR) in tetraploid potato (Solanum tuberosum L.) germplasm. Euphytica 113:135-144.
9. Milbourne D, RC Meyer, AJ Collins, LD Ramsay, C Gebhardt, and R Waugh. 1998. Isolation, characterization and mapping of simple sequence repeat loci in potato. Mol Gen Genet 259:233-245.
10. Nei M, and WH Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269-5273.
11. Provan J, W Powell, and R Waugh. 1996. Microsatellite analysis of relationships within cultivated potato (Solanum tuberosum). Theor Appl Genet 92:1078-1084.
12. Rohlf FJ. 2002. NTSYSpc: Numerical Taxonomy System, ver. 2.11L. Exeter Publishing, Ltd., Setauket, NY.
13. Sambrook J, and D Russell. 2001. Molecular Cloning: A Laboratory Manual. 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
14. Schneider K, and DS Douches. 1997. Assessment of PCR-based simple sequence repeats to fingerprint North American potato cultivars. Am Potato J 74:149-164.