Microsatellite analysis of relationships within cultivated potato (Solanum tuberosum)

Theoretical and Applied Genetics

Volumn 92, Issue 8, 1996, Pages 1078-1084

  Provan, J ^a   Powell, W ^a   Waugh, R ^a  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

Genotyping; Microsatellites; Potato; Tomato

Indexed keywords

SOLANUM TUBEROSUM;

EID: 0029812119     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF00224052     Document Type: Article

References (39)

1. Akkaya MS, Bhagwat AA, Cregan PB (1992) Length polymorphisms of simple sequence repeat DNA in soybean. Genetics 132 : 1131-1139
2. Beckmann JS, Soller M (1990) Toward a unified approach to genetic mapping of eukaryotes based on sequence tagged microsatellite sites. Biotechnology 8 : 930-932
3. Bell CJ, Ecker JR (1994) Assignment of 30 microsatellite loci to the linkage map of Arabidopsis. Genomics 19 : 137-144
4. Bishop MD, Kappes SM, Keele JW, Stone RT, Sunden SLF, Hawkins GA, Toldo SS, Fries R, Grosz MD, Yoo J, Beattie CW (1994) A genetic linkage map for cattle. Genetics 136 : 619-639
5. Bostein D, White RL, Skolnick M, Davis RW (1980) Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32 : 314-331
6. Brunel D (1994) A microsatellite marker in Helianthus annuus L. Plant Mol Biol 24 : 397-400
7. Condit R, Hubbell SP (1991) Abundance and DNA sequence of two-base repeat regions in tropical tree genomes. Genome 34 : 66-71
8. Dietrich W, Katz H, Lincoln SE, Shin H, Friedman J, Dracopoh NC, Lander ES (1992) A genetic map of the mouse suitable for typing intraspecific crosses. Genetics 131 : 423-447
9. Dirienzo A, Peterson AC, Garza JC, Valdes AM, Slatkin M, Freimer NB (1994) Mutational processes of simple sequence repeat loci in human populations. Proc Natl Acad Sci USA 91 : 3166-3170
10. Edwards K, Johnstone C, Thomson C (1991) A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res 19 : 1349
11. Gebhardt C, Ritter E, Debener T, Schachtschabel U, Walkemeir B, Uhrig H, Salamini F (1989) RFLP analysis and linkage mapping in Solanum tuberosum. Theor Appl Genet 78 : 65-75
12. GENSTAT 5.0 Commitee (1987) GENSTAT 5.0 reference manual. Clarendon Press, Oxford
13. Hamada H, Petrino MG, Kakunaga T (1982) A novel repeated element with Z-DNA forming potential is widely found in evolutionarily diverse eukaryotic genomes. Proc Natl Acad Sci USA 79 : 6465-6469
14. Hearne CM, Ghosh S, Todd JA (1992) Microsatellites for linkage analysis of genetic traits. Trends Genet 8 : 288-294
15. Lagercrantz U, Ellegren H, Andersson L (1993) The abundance of various polymorphic microsatellite repeats differs between plants and vertebrates. Nucleic Acids Res 21 : 1111-1115
16. Litt M, Luty JA (1989) A hepervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am J Hum Genet 44 : 397-401
17. Morgante M, Olivieri AM (1993) PCR amplified microsatellites in plant genetics. Plant J 3 : 175-182
18. Nei M, Li WH (1979) Mathematical modelling for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 74 : 5267-5273
19. Olson M, Hood L, Cantor C, Botstein D (1989) A common language for physical mapping of the human genome. Science 245 : 1434-1435
20. Powell W, Phillips MS, McNicol JW, Waugh R (1991) The use of DNA markers to estimate the extent and nature of genetic variability in Solanum tuberosum cultivars. Ann Appl Biol 118 : 423-432
21. Powell W, Baird E, Duncan N, Waugh R (1993) Chloroplast DNA variability in old and recently introduced potato cultivars. Ann Appl Biol 123 : 403-410
22. Powell W, Morgante M, Vogel J, Tingey S, Rafalski AJ (1994) technology for plant genome analysis and breeding. In: Proc IPBA. Rogia, Slovenia pp 177-180
23. Rafalski JA, Tingey SV (1993) Genetic diagnostics in plant breeding: RAPDs, microsatellites and machines. Trends Genet 9 : 275-280
24. Rohrer GA, Leeson AJ, Keele JW, Smith TP, Beattie CW (1994) A microsatellite linkage map of the porcine genome. Genetics 136 : 231-245
25. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer length polymorphism in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA 81 : 8014-8018
26. Saghai-Maroof MA, Biyashev RM, Yang GP, Zhang Q, Allard RW (1994) Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations and population dynamics. Proc Natl Acad Sci USA 91 : 5466-5470
27. Senior ML, Heun M (1993) Mapping maize microsatellites and polymerase chain reaction confirmation of the repeats using a CT primer. Genome 36 : 884-889
28. Sarikawa T, Kuramoto, T, Hubert P, Mori M, Yamada J, Dubay CJ, Lindpainter K, Ganten D, Gunet J-L, Lathrop GM, Beckmann JS (1992) Rat gene mapping using PCR-analysed microsatellites. Genetics 131 : 701-721
29. Soller M, Beckmann JS (1983) Genetic polymorphism in varietal identification and genetic improvement. Theor Appl Genet 67 : 25-33
30. Tautz D (1989) Hypervariability of sample sequences as a general source for polymorphic DNA markers. Nucleic Acids Res 17 . 6463-6471
31. Tautz D, Rentz M (1984) Simple sequences are ubiquitous repetitive components of eukaryotic genomes. Nucleic Acids Res 12 : 4127-4138
32. Thomas MR, Scott NS (1993) Microsatellite repeats in grapevine reveal DNA polymorphisms when analysed as sequence-tagged sites (STS). Theor Appl Genet 86 : 985-990
33. Thomas MR, Cain P, Scott NS (1994) DNA typing of grapevines: a universal methodology and database for describing cultivars and evaluating genetic relatedness. Plant Mol Biol 25 : 939-949
34. Wang Z, Weber JL, Zhong G, Tanksley SD (1994) Survey of plant short tandem DNA repeats. Theor Appl Genet 88 : 1-6
35. Welsh J, McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res 18 : 7213-7218
36. Wiessenbach J, Gyapay G, Dib C, Vignal A, Morissette J, Millasseau P, Vaysseix G, Lathrop M (1992) A second generation map of the human genome. Nature 359 : 794-801
37. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18 : 6531-6535
38. Wu K-S, Tanksley SD (1993) Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241 : 225-235
39. n microsatellite from rice (Oryza sativa L.). Plant Mol Biol 21 : 607-614