메뉴 건너뛰기




Volumn 7, Issue 5, 2004, Pages 605-609

Systems approaches to understanding cell signaling and gene regulation

Author keywords

[No Author keywords available]

Indexed keywords

EMBRYOPHYTA;

EID: 4444300833     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pbi.2004.07.001     Document Type: Note
Times cited : (21)

References (32)
  • 1
    • 0036531903 scopus 로고    scopus 로고
    • 'Omic' approaches for unraveling signaling networks
    • H. Zhu, and M. Snyder 'Omic' approaches for unraveling signaling networks Curr Opin Cell Biol 14 2002 173 179
    • (2002) Curr Opin Cell Biol , vol.14 , pp. 173-179
    • Zhu, H.1    Snyder, M.2
  • 2
    • 0034649566 scopus 로고    scopus 로고
    • Arabidopsis Genome Initiative: Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative: Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 6
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • V.G. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response Proc Natl Acad Sci USA 98 2001 5116 5121
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 7
    • 0037276175 scopus 로고    scopus 로고
    • Statistical tests for differential expression in cDNA microarray experiments
    • X. Cui, and G.A. Churchill Statistical tests for differential expression in cDNA microarray experiments Genome Biol 4 2003 210
    • (2003) Genome Biol , vol.4 , pp. 210
    • Cui, X.1    Churchill, G.A.2
  • 9
    • 0036805329 scopus 로고    scopus 로고
    • Bridging structural biology and genomics: Assessing protein interaction data with known complexes
    • A.M. Edwards, B. Kus, R. Jansen, D. Greenbaum, J. Greenblatt, and M. Gerstein Bridging structural biology and genomics: assessing protein interaction data with known complexes Trends Genet 18 2002 529 536
    • (2002) Trends Genet , vol.18 , pp. 529-536
    • Edwards, A.M.1    Kus, B.2    Jansen, R.3    Greenbaum, D.4    Greenblatt, J.5    Gerstein, M.6
  • 10
    • 0036598460 scopus 로고    scopus 로고
    • Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis
    • Y.H. Cheong, H.S. Chang, R. Gupta, X. Wang, T. Zhu, and S. Luan Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis Plant Physiol 129 2002 661 677
    • (2002) Plant Physiol , vol.129 , pp. 661-677
    • Cheong, Y.H.1    Chang, H.S.2    Gupta, R.3    Wang, X.4    Zhu, T.5    Luan, S.6
  • 11
    • 0036671216 scopus 로고    scopus 로고
    • Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway
    • S. Fowler, and M.F. Thomashow Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway Plant Cell 14 2002 1675 1690
    • (2002) Plant Cell , vol.14 , pp. 1675-1690
    • Fowler, S.1    Thomashow, M.F.2
  • 12
    • 0036909761 scopus 로고    scopus 로고
    • Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress
    • J.A. Kreps, Y. Wu, H.S. Chang, T. Zhu, X. Wang, and J.F. Harper Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress Plant Physiol 130 2002 2129 2141
    • (2002) Plant Physiol , vol.130 , pp. 2129-2141
    • Kreps, J.A.1    Wu, Y.2    Chang, H.S.3    Zhu, T.4    Wang, X.5    Harper, J.F.6
  • 13
    • 0036679053 scopus 로고    scopus 로고
    • Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray
    • M. Seki, M. Narusaka, J. Ishida, T. Nanjo, M. Fujita, Y. Oono, A. Kamiya, M. Nakajima, A. Enju, and T. Sakurai Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray Plant J 31 2002 279 292
    • (2002) Plant J , vol.31 , pp. 279-292
    • Seki, M.1    Narusaka, M.2    Ishida, J.3    Nanjo, T.4    Fujita, M.5    Oono, Y.6    Kamiya, A.7    Nakajima, M.8    Enju, A.9    Sakurai, T.10
  • 14
    • 0038372467 scopus 로고    scopus 로고
    • Topology of the network integrating salicylate and jasmonate signal transduction derived from global expression phenotyping
    • J. Glazebrook, W. Chen, B. Estes, H.S. Chang, C. Nawrath, J.P. Metraux, T. Zhu, and F. Katagiri Topology of the network integrating salicylate and jasmonate signal transduction derived from global expression phenotyping Plant J 34 2003 217 228
    • (2003) Plant J , vol.34 , pp. 217-228
    • Glazebrook, J.1    Chen, W.2    Estes, B.3    Chang, H.S.4    Nawrath, C.5    Metraux, J.P.6    Zhu, T.7    Katagiri, F.8
  • 15
    • 0037259469 scopus 로고    scopus 로고
    • ETHYLENE RESPONSE FACTOR1 integrates signals from ethylene and jasmonate pathways in plant defense
    • O. Lorenzo, R. Piqueras, J.J. Sanchez-Serrano, and R. Solano ETHYLENE RESPONSE FACTOR1 integrates signals from ethylene and jasmonate pathways in plant defense Plant Cell 15 2003 165 178
    • (2003) Plant Cell , vol.15 , pp. 165-178
    • Lorenzo, O.1    Piqueras, R.2    Sanchez-Serrano, J.J.3    Solano, R.4
  • 16
    • 9144230726 scopus 로고    scopus 로고
    • Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses
    • M.A. Rabbani, K. Maruyama, H. Abe, M.A. Khan, K. Katsura, Y. Ito, K. Yoshiwara, M. Seki, K. Shinozaki, and K. Yamaguchi-Shinozaki Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses Plant Physiol 133 2003 1755 1767
    • (2003) Plant Physiol , vol.133 , pp. 1755-1767
    • Rabbani, M.A.1    Maruyama, K.2    Abe, H.3    Khan, M.A.4    Katsura, K.5    Ito, Y.6    Yoshiwara, K.7    Seki, M.8    Shinozaki, K.9    Yamaguchi-Shinozaki, K.10
  • 17
    • 0036010572 scopus 로고    scopus 로고
    • Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses
    • W. Chen, N.J. Provart, J. Glazebrook, F. Katagiri, H.S. Chang, T. Eulgem, F. Mauch, S. Luan, G. Zou, and S.A. Whitham Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses Plant Cell 14 2002 559 574
    • (2002) Plant Cell , vol.14 , pp. 559-574
    • Chen, W.1    Provart, N.J.2    Glazebrook, J.3    Katagiri, F.4    Chang, H.S.5    Eulgem, T.6    Mauch, F.7    Luan, S.8    Zou, G.9    Whitham, S.A.10
  • 18
    • 0036137323 scopus 로고    scopus 로고
    • A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
    • G. Thijs, M. Lescot, K. Marchal, S. Rombauts, B. De Moor, P. Rouze, and Y. Moreau A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling Bioinformatics 17 2001 1113 1122
    • (2001) Bioinformatics , vol.17 , pp. 1113-1122
    • Thijs, G.1    Lescot, M.2    Marchal, K.3    Rombauts, S.4    De Moor, B.5    Rouze, P.6    Moreau, Y.7
  • 20
    • 0033866518 scopus 로고    scopus 로고
    • Quantitative nature of the Prolamin-box, ACGT and AACA motifs in a rice glutelin gene promoter: Minimal cis-element requirements for endosperm-specific gene expression
    • C. Wu, H. Washida, Y. Onodera, K. Harada, and F. Takaiwa Quantitative nature of the Prolamin-box, ACGT and AACA motifs in a rice glutelin gene promoter: minimal cis-element requirements for endosperm-specific gene expression Plant J 23 2000 415 421
    • (2000) Plant J , vol.23 , pp. 415-421
    • Wu, C.1    Washida, H.2    Onodera, Y.3    Harada, K.4    Takaiwa, F.5
  • 22
    • 1542542442 scopus 로고    scopus 로고
    • Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant
    • N. Leonhardt, J.M. Kwak, N. Robert, D. Waner, G. Leonhardt, and J.I. Schroeder Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant Plant Cell 16 2004 596 615
    • (2004) Plant Cell , vol.16 , pp. 596-615
    • Leonhardt, N.1    Kwak, J.M.2    Robert, N.3    Waner, D.4    Leonhardt, G.5    Schroeder, J.I.6
  • 26
    • 0037461036 scopus 로고    scopus 로고
    • Cellerator: Extending a computer algebra system to include biochemical arrows for signal transduction simulations
    • B.E. Shapiro, A. Levchenko, E.M. Meyerowitz, B.J. Wold, and E.D. Mjolsness Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations Bioinformatics 19 2003 677 678
    • (2003) Bioinformatics , vol.19 , pp. 677-678
    • Shapiro, B.E.1    Levchenko, A.2    Meyerowitz, E.M.3    Wold, B.J.4    Mjolsness, E.D.5
  • 27
    • 0742270971 scopus 로고    scopus 로고
    • Evidence for complex, collective dynamics and emergent, distributed computation in plants
    • D. Peak, J.D. West, S.M. Messinger, and K.A. Mott Evidence for complex, collective dynamics and emergent, distributed computation in plants Proc Natl Acad Sci USA 101 2004 918 922
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 918-922
    • Peak, D.1    West, J.D.2    Messinger, S.M.3    Mott, K.A.4
  • 28
    • 0037249498 scopus 로고    scopus 로고
    • The Arabidopsis Information Resource (TAIR): A model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community
    • S.Y. Rhee, W. Beavis, T.Z. Berardini, G. Chen, D. Dixon, A. Doyle, M. Garcia-Hernandez, E. Huala, G. Lander, and M. Montoya The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community Nucleic Acids Res 31 2003 224 228
    • (2003) Nucleic Acids Res , vol.31 , pp. 224-228
    • Rhee, S.Y.1    Beavis, W.2    Berardini, T.Z.3    Chen, G.4    Dixon, D.5    Doyle, A.6    Garcia-Hernandez, M.7    Huala, E.8    Lander, G.9    Montoya, M.10
  • 29
    • 0347968038 scopus 로고    scopus 로고
    • NASCArrays: A repository for microarray data generated by NASC's transcriptomics service
    • D.J. Craigon, N. James, J. Okyere, J. Higgins, J. Jotham, and S. May NASCArrays: a repository for microarray data generated by NASC's transcriptomics service Nucleic Acids Res 32 Database issue 2004 D575 D577
    • (2004) Nucleic Acids Res , vol.32
    • Craigon, D.J.1    James, N.2    Okyere, J.3    Higgins, J.4    Jotham, J.5    May, S.6
  • 32
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The Biomolecular Interaction Network Database
    • G.D. Bader, D. Betel, and C.W. Hogue BIND: the Biomolecular Interaction Network Database Nucleic Acids Res 31 2003 248 250
    • (2003) Nucleic Acids Res , vol.31 , pp. 248-250
    • Bader, G.D.1    Betel, D.2    Hogue, C.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.