Common genotypes of hepatitis B virus

Journal of the College of Physicians and Surgeons Pakistan

Volumn 14, Issue 6, 2004, Pages 344-347

  Idrees, Muhammad ^a,b   Khan, Sanaullah ^a   Riazuddin, Sheikh ^a  

^a UNIVERSITY OF THE PUNJAB   (Pakistan)

^b NONE   (Pakistan)

Author keywords

Cirrhosis; Genotype specific PCR; Hepatitis B; Hepatocellular carcinoma; Pathogenicity

Indexed keywords

HEPATITIS B SURFACE ANTIGEN; VIRUS DNA;

ARTICLE; BLOOD SAMPLING; CONTROLLED STUDY; DNA EXTRACTION; GENE AMPLIFICATION; GENOTYPE; HEPATITIS B; HEPATITIS B VIRUS; HOSPITAL DEPARTMENT; HUMAN; HUMAN CELL; MAJOR CLINICAL STUDY; PAKISTAN; POLYMERASE CHAIN REACTION; VIRUS ISOLATION;

DNA, VIRAL; GENOTYPE; HEPATITIS B; HEPATITIS B VIRUS; HUMANS; PAKISTAN; POLYMERASE CHAIN REACTION; PREVALENCE;

EID: 4444300319     PISSN: 1022386X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (29)

1. Kao JH, Chen DS. Overview of hepatitis B and C viruses. In: Goedert JJ, (edi). Infectious causes of cancer: targets for intervention. Totowa NJ: Humana Press; 2000: 313-30.
2. Chen DS. From hepatitis to hepatoma: lessons from type B viral hepatitis. Science 1993; 262: 369-70.
3. Westland C. Distribution of HBV genotypes and serum HBV DNA response in 694 patients in phase 3 studies of Adefovir Dipivoxil. Hepatology 2002; 36: 2-8.
4. Borchani-Chabchoub I, Gargouri A, Mokdad-Gargouri R. Genotyping of Tunisian hepatitis B virus isolates based on the sequencing of pre S2 and S regions. Microbes Infect 2000; 2: 607-12.
5. Grandjacques C, Pradat P, Stuyver L, Chevallier M, Chevallier P, Pichoud C, et al. Rapid detection of genotypes and mutations in the pre-core promoter and the pre-core region of hepatitis B virus genome: correlation with viral persistence and disease severity. J Hepatol 2000; 33: 430-9.
6. Kato H, Orito E, Sugauchi F, Ueda R, Gish RG, Usuda S. Determination of hepatitis B virus genotype G by polymerase chain reaction with hemi-nested primers. J Virol Methods 2001; 98: 153-9.
7. Ashton-Rickardt PG, Murray K. Mutations that change the immunological subtype of hepatitis B virus surface antigen and distinguish between antigenic and immunogenic determination. J Med Virol 1989; 29: 204-14.
8. Norder H, Courouce AM, Magnius LO. Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 1994; 198: 489-503.
9. Stuyver L, Gendt SD, Van Geyt C, Zoulim F, Fried M, Schinazi RF. et al. A new genotype of hepatitis B virus: complete genome and phylogenetic relatedness. J Gen Virol 2002; 81: 67-74.
10. Kao JH, Chen PJ, Lai MY, Chen DS. Hepatitis B genotypes correlate with clinical outcomes in patients with chronic hepatitis B. Gastroenterology 2000; 118: 554-9.
11. Kao JH, Wu NH, Chen PJ. Hepatitis B genotypes and the response to interferon therapy. J Hepatol 2000; 33: 998-1002.
12. Mizokami M, Nakano T, Orito E, Ikeo K, Lau JY, Gojobori T. Hepatitis B virus genotype assignment using restriction fragment length polymorphism patterns. FEBS Letters 1999; 450: 66-71.
13. Naito H, Hayashi S, Abe K. Rapid and specific genotyping system for hepatitis B virus corresponding to six major genotypes by PCR using type-specific primers. J Clin Microbiol 2001; 39: 362-4.
14. Arauz-Ruiz P, Norder H, Robertson BH, Magnius LO. Genotype H: a new Amerindian genotype of hepatitis B virus revealed in Central America. J Gen Virol 2002; 83: 2059-73.
15. William E, Delaney IV, Huiling Y. The hepatitis 6 virus polymerase mutation rtV173L is selected during lamivudine therapy and enhances viral replication in vitro. J Virol 2003; 77: 11833-41.
16. Ling R, Mutimer D, Ahmed M. Selection of mutations in the hepatitis B virus polymerase during therapy of transplant recipients with lamivudine. Hepatology 1996; 24: 711-3.
17. Zollner B, Peterson J, Schroter M, Laufs R, Schoder V, Feucht HH. 20-fold increase in risk of lamivudine resistance in hepatitis B virus subtype adw. Lancet 2001; 357: 934-5.
18. Kao JH, Wu NH, Chen PJ, Lai MY, Chen DS. Hepatitis B genotypes and the response to interferon therapy. J Hepatol 2000; 33: 998-1002.
19. Yuen M, Sablon E, Yuan HJ. Significance of hepatitis B genotype in acute exacerbation, HBeAg seroconversion, cirrhosis-related complications, and hepatocellular carcinoma. Hepatology 2003; 37: 562-7.
20. Bowyer SM, van Staden L, Kew MC, Sim JG. A unique segment of the hepatitis B virus group A genotype identified in isolates from South Africa. J Gen Virol 1997; 78: 1719-29.
21. Flodgren E, Bengtsson S, Knutsson M, Strebkova EA, Kidd AH, Alexeyev OA. et al. Recent high incidence of fulminant hepatitis in Samara, Russia: molecular analysis of prevailing hepatitis B and D virus strains. J Clin Microbiol 2000; 38: 3311-6.
22. Odemuyiwa SO, Mulders MN, Oyedele I, Ola SO, Odaibo GN, Olaleye DO. et al. Phylogenetic analysis of new hepatitis B virus isolates from Nigeria supports endemicity of genotype E in West Africa. J Med Virol 2001; 65: 463-9.
23. Norder HB, Hammas SD, Lee K, Bile K, Couroucé AM, Mushahwar IK, et al. Genetic relatedness of hepatitis B viral strains of diverse geographical origin and natural variations in the primary structure of the surface antigen. J Gen Virol 1993; 74: 1341-8.
24. Kidd-Ljunggren K, Oberg M, Kidd AH. The hepatitis B virus X gene: analysis of functional domain variation and gene phylogeny using multiple sequences. J Gen Virol 1995; 76: 2119-30.
25. Lok A, Akarca U, Greene S. Mutations in the pre-core region of the hepatitis B virus serve to enhance the stability of the secondary structure of the pre-genome encapsidation signal. Proc Nat Acad Sci 1994; 91: 4077-81.
26. Bowyer SM, Sim JG. Relationships within and between genotypes of hepatitis B virus at points across the genome: footprints of recombination in certain isolates. J Gen Virol 2000; 81: 379-92.
27. Theamboonlers A, Jantaradsamee P, Kaew N, Tangkijvanich P, Hirsch P, Poovorawan Y, et al. The predominant genotypes of hepatitis B virus in Thailand. Ann Trop Med Parasitol 1999; 93: 737-43.
28. Orito E, Ichida T, Sakugawa H, Sata M, Horiike N, Hino K, et al. Geographic distribution of hepatitis B virus (HBV) genotype in patients with chronic HBV infection in Japan. Hepatology 2001; 34: 590-4.
29. Gust I. The epidemiology of viral hepatitis. In: Vyas GN, (edi). Viral hepatitis and liver disease, Grune and Strutton; Orland 1984; 415-21.