Species recognition, geographic distribution and host-pathogen relationships: A case study in a group of lignicolous basidiomycetes, Phellinus s.l.

Mycologia

Volumn 96, Issue 4, 2004, Pages 799-811

  Fischer, Michael ^a   Binder, Manfred ^b  

^a Staatliches Weinbauinstitut   (Germany)

^b CLARK UNIVERSITY   (United States)

Author keywords

Biogeography; Cryptic species; Host range; Hymenochaetales; ITS phylogeny; Pairing tests

Indexed keywords

FUNGUS; GEOGRAPHICAL DISTRIBUTION; HOST RANGE; HOST-PATHOGEN INTERACTION;

ASIA; EURASIA; NORTH AMERICA;

BACTERIA (MICROORGANISMS); BASIDIOMYCOTA; FOMITIPORIA; FOMITIPORIA HESLERI; FOMITIPORIA POLYMORPHA; FUNGI; HYMENOCHAETALES; PHELLINUS; PHELLINUS TREMULAE;

EID: 4444290951     PISSN: 00275514     EISSN: None     Source Type: Journal    
DOI: 10.1080/15572536.2005.11832927     Document Type: Article

References (45)

1. Anderson JB, Ullrich RC. 1979. Biological species of Armillaria mellea in North America. Mycologia 71:402-414.
2. _, Stasovski E. 1992. Molecular phylogeny of northern hemisphere specis of Armillaria. Mycologia 84:505-516.
3. Boidin J. 1986. Intercompatibility and the species concept in the saprobic Basidiomycotina. Mycotaxon 26:319-336.
4. Cortesi P, Fischer M, Milgroom MG. 2000. Identification and spread of Fomitiporia punctata associated with wood decay of grapevine showing symptoms of esca disease. Phytopathology 90:967-972.
5. Cunningham GH. 1965. Polyporaceae of New Zealand. New Zealand Dept Sci Industr Res Bull 64:1-304.
6. Dai Y-C. 1996. Changbai wood-rotting fungi 7. A checklist of the polypores. Fung Sci 11:79-105.
7. _. 1999. Phellinus sensu lato (Aphyllophorales, Hymenochaetaceae) in East Asia. Acta Botanica Fennica 166:1-115.
8. _, Vainio EJ, Hantula J, Niemelä T, Korhonen K. 2002. Sexuality and intersterility within the Heterobasidion insulare complex. Mycol Res 106:1435-1448.
9. David A, Rajchenberg M. 1985. Pore fungi from French Antilles and Guiana. Mycotaxon 22:285-325.
10. Day PR. 1963. Mutations affecting the a mating type locus in Coprinus lagopus. Genet Res 4:55-65.
11. D'Aquila RT, Bechtel LF, Videler JA, Eron JE, Gorczyca P, Kaplan JC. 1991. Maximizing sensitivity and specificity of PCR by preamplifaction heating. Nucleic Acids Res 19:3749.
12. Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
13. Fiasson JL, Niemelä T. 1984. The Hymenochaetales: a revision of the European poroid taxa. Karstenia 24:14-28.
14. Fischer M. 1987. Biosystematische Untersuchungen an den Porlingsgattungen Phellinus Quél, und Inonotus Karst. Biblioth Mycol 107:1-139.
15. _. 1994. Pairing tests in the Phellinus pini group. Mycologia 86:524-539.
16. _. 1995. Phellinus igniarius and its closest relatives in Europe. Mycol Res 99:735-744.
17. _, Binder M. 1995. Phellinus species on Betula. Mating tests, RFLP analysis of enzymatically amplified rDNA, and relations to Phellinus alni. Karstenia 35:67-84.
18. _. 1996. Molecular and microscopial studies in the Phellinus pini group. Mycologia 88:230-238.
19. _. 2000. Porodaedalea (Phellinus pini group, Basidiomycetes) in Europe: a new species on Larix sibirica, P. niemelaei. Karstenia 40:43-48.
20. _. 2002. A new wood-decaying basidiomycete species associated with esca of grapevine: Fomitiporia mediterranea (Hymenochaetales). Myc Prog 1:315-324.
21. Gilbertson RL, Ryvarden L. 1987. North American Polypores. Vol. 2. Fungiflora: Oslo, Norway. 455 p.
22. Hallenberg N. 1984. A taxonomic analysis of the Sistotrema brinkmannii complex (Corticiaceae, Basidiomycetes). Mycotaxon 21:389-411.
23. Hughes KW, McGhee LL, Methven AS, Johnson JE, Petersen RH. 1999. Patterns of geographic speciation in the genus Flammulina based on sequences of the ribosomal ITS1-5.8S-ITS2 area. Mycologia 91:978-986.
24. Jahn H. 1963. Mitteleuropäische Porlinge (Polyporaceae s.l.) und ihr Vorkommen in Westfalen (unter Ausschluß der resupinaten Arten). Westfälische Pilzbriefe 4:1-143.
25. Korhonen K. 1978. Intersterility groups of Heterobasidion annosum. Commun Inst Forest Fenn 94:1-25.
26. Larsen MJ, Cobb-Poulle LA. 1990. Phellinus (Hymenochaetaceae). A survey of the world taxa. Oslo, Norway: Fungiflora. 206 p.
27. Lee SB, Taylor JW. 1990. Isolation of DNA from fungal mycelia and single cells. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols. San Diego: Academic Press. p 282-287.
28. Mallett KI, Myrholm CL. 1995. The mating system of Phellinus tremulae. Mycologia 87:597-603.
29. Methven A, Hughes KW, Petersen RH. 2000. Flammulina RFLP patterns identify species and show biogeographical patterns within species. Mycologia 92:1064-1070.
30. Niemelä T. 1975. On Fennoscandian polypores. IV. Phellinus igniarius, P. nigricans and P. populicola n. sp. Ann Bot Fenn 12:93-122.
31. Parmasto E. 1976. Studies on Yakutian fungi. II. Eesti NSV Teaduste Akaademia toimetised/Bioloogine Seeria 25:316-321.
32. _. 1985. Species concept in Hymenochaetaceae (Fungi, Hymenomycetes). Proc Indian Acad Sci 94:369-380.
33. Parag Y. 1962. Mutations in the B incompatibility factor in Schizophyllum commune. Proc Natl Acad Sci U.S.A. 48:743-750.
34. Petersen RH, Hughes KW. 1999. Species and speciation in mushrooms. BioScience 49:440-452.
35. Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics Appl Note 14:817-818.
36. Raper JR, Boyd DH, Raper CA. 1965. Primary and secondary mutations of the incompatibility loci in Schizophyllum. Proc Natl Acad Sci U.S.A. 53:1324-1332.
37. Ryvarden L. 1991. Genera of polypores. Synopsis fungorum 5, Oslo, Norway. 363 p.
38. _, Gilbertson RL. 1994. European polypores. Vol. 2. Oslo, Norway: Fungiflora. 355 p.
39. Swofford DL. 2003. PAUP*: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4.0. Sunderland, Massachusetts: Sinauer Associates.
40. Taylor JW, Jacobson DJ, Kroken S, Kasuga T, Geiser DM, Hibbett DS, Fisher MC. 2000. Phylogenetic species recognition and species concepts in fungi. Fungal Genet Biol 31:21-32.
41. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882.
42. Wagner T, Fischer M. 2001. Natural groups and a revised system for the European poroid Hymenochaetales (Basidiomycota) supported by nLSU rDNA sequence data. Mycol Res 105:773-782.
43. _, Fischer M. 2002. Proceedings towards a natural classification of the worlwide taxa Phellinus s.l. and Inonotus s.l., and phylogenetic relationships of allied genera. Mycologia 94:998-1016.
44. White TJ, Bruns TD, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols. San Diego: Academic Press. p 315-322.
45. Zhao J-D, Zhang X-Q. 1992. The polypores of China. Biblioth Mycol 145:1-524.