-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0037388042
-
Dealing with iron: Common structural principles in proteins that transport iron and heme
-
Baker, H. M., Anderson, B. F. & Baker, E. N. (2003). Dealing with iron: common structural principles in proteins that transport iron and heme. Proc Natl Acad Sci U S A 100, 3579-3583.
-
(2003)
Proc. Natl. Acad. Sci. U S A
, vol.100
, pp. 3579-3583
-
-
Baker, H.M.1
Anderson, B.F.2
Baker, E.N.3
-
3
-
-
0011542799
-
The Pfam protein families database
-
and 7 other authors
-
Bateman, A., Birney, E., Cerruti, L. & 7 other authors (2002). The Pfam protein families database. Nucleic Acids Res 30, 276-280.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 276-280
-
-
Bateman, A.1
Birney, E.2
Cerruti, L.3
-
4
-
-
0033967631
-
The Tat protein export pathway
-
Berks, B. C., Sargent, F. & Palmer, T. (2000). The Tat protein export pathway. Mol Microbiol 35, 260-274.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 260-274
-
-
Berks, B.C.1
Sargent, F.2
Palmer, T.3
-
5
-
-
0021321955
-
A rapid, sensitive method for detection of alkaline phosphatase-conjugated anti-antibody on Western blots
-
Blake, M. S., Johnston, K. H., Russel-Jones, G. J. & Gotschlich, E. C. (1984). A rapid, sensitive method for detection of alkaline phosphatase-conjugated anti-antibody on Western blots. Anal Bioche 136, 175-179.
-
(1984)
Anal. Biochem.
, vol.136
, pp. 175-179
-
-
Blake, M.S.1
Johnston, K.H.2
Russel-Jones, G.J.3
Gotschlich, E.C.4
-
6
-
-
0031006412
-
Antibiotic resistance gene cassettes derived from the omega interposon for use in E. coli and Streptomyces
-
Blondelet-Rouault, M. H., Weiser, J., Lebrihi, A., Branny, P. & Pernodet, J. L. (1997). Antibiotic resistance gene cassettes derived from the omega interposon for use in E. coli and Streptomyces. Gene 190, 315-317.
-
(1997)
Gene
, vol.190
, pp. 315-317
-
-
Blondelet-Rouault, M.H.1
Weiser, J.2
Lebrihi, A.3
Branny, P.4
Pernodet, J.L.5
-
7
-
-
0032541133
-
An essential component of a novel bacterial protein export system with homologues in plastids and mitochondria
-
Bogsch, E. G., Sargent, F., Stanley, N. R., Berks, B. C., Robinson, C. & Palmer, T. (1998). An essential component of a novel bacterial protein export system with homologues in plastids and mitochondria. J Biol Chem 273, 18003-18006.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 18003-18006
-
-
Bogsch, E.G.1
Sargent, F.2
Stanley, N.R.3
Berks, B.C.4
Robinson, C.5
Palmer, T.6
-
8
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilising the principle of protein-dye binding
-
Bradford, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilising the principle of protein-dye binding. Anal Biochem 72, 248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
9
-
-
0037010152
-
Iron transport and signaling in Escherichia coli
-
Braun, V. & Braun, M. (2002). Iron transport and signaling in Escherichia coli. FEBS Lett 529, 78-85.
-
(2002)
FEBS Lett.
, vol.529
, pp. 78-85
-
-
Braun, V.1
Braun, M.2
-
10
-
-
0032435519
-
Targeting of thylakoid proteins by the ΔpH-driven twin-arginine translocation pathway requires a specific signal in the hydrophobic domain in conjunction with the twin-arginine motif
-
Brink, S., Bogsch, E. G., Edwards, W. R., Hynds, P. J. & Robinson, C. (1998). Targeting of thylakoid proteins by the ΔpH-driven twin-arginine translocation pathway requires a specific signal in the hydrophobic domain in conjunction with the twin-arginine motif FEBS Lett 434, 425-430.
-
(1998)
FEBS Lett.
, vol.434
, pp. 425-430
-
-
Brink, S.1
Bogsch, E.G.2
Edwards, W.R.3
Hynds, P.J.4
Robinson, C.5
-
11
-
-
0036903356
-
Identification of two domains and distal histidine ligands to the four haems in the bacterial c-type cytochrome NapC; the prototype connector between quinol/quinone and periplasmic oxido-reductases
-
Cartron, M. L., Roldan, M. D., Ferguson, S. J., Berks, B. C. & Richardson, D. J. (2002). Identification of two domains and distal histidine ligands to the four haems in the bacterial c-type cytochrome NapC; the prototype connector between quinol/quinone and periplasmic oxido-reductases. Biochem J 368, 425-432.
-
(2002)
Biochem. J.
, vol.368
, pp. 425-432
-
-
Cartron, M.L.1
Roldan, M.D.2
Ferguson, S.J.3
Berks, B.C.4
Richardson, D.J.5
-
12
-
-
0026088567
-
Chromogenic substrates for horseradish peroxidase
-
Conyers, S. M. & Kidwell, D. A. (1991). Chromogenic substrates for horseradish peroxidase. Anal Biochem 192, 207-211.
-
(1991)
Anal. Biochem.
, vol.192
, pp. 207-211
-
-
Conyers, S.M.1
Kidwell, D.A.2
-
13
-
-
0023948010
-
High efficiency transformation of E. coli by high voltage electroporation
-
Dower, W. J., Miller, J. F. & Ragsdale, C. W. (1988). High efficiency transformation of E. coli by high voltage electroporation. Nucleic Acids Res 16, 6127-6145.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 6127-6145
-
-
Dower, W.J.1
Miller, J.F.2
Ragsdale, C.W.3
-
14
-
-
0037214399
-
Biochemical and mutational characterization of the heme chaperone CcmE reveals a heme binding site
-
Enggist, E., Schneider, M. J., Schulz, H. & Thony-Meyer, L. (2003). Biochemical and mutational characterization of the heme chaperone CcmE reveals a heme binding site. J Bacteriol 185, 175-183.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 175-183
-
-
Enggist, E.1
Schneider, M.J.2
Schulz, H.3
Thony-Meyer, L.4
-
15
-
-
0021723457
-
Crystal structure of yeast cytochrome c peroxidase refined at 1.7-Å resolution
-
Finzel, B. C., Poulos, T. L. & Kraut, J. (1984). Crystal structure of yeast cytochrome c peroxidase refined at 1-7-Å resolution. J Biol Chem 259, 13027-13036.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 13027-13036
-
-
Finzel, B.C.1
Poulos, T.L.2
Kraut, J.3
-
16
-
-
0022472686
-
Biological effects of the superoxide radical
-
Fridovich, I. (1986). Biological effects of the superoxide radical. Arch Biochem Biophys 247, 1-11.
-
(1986)
Arch. Biochem. Biophys.
, vol.247
, pp. 1-11
-
-
Fridovich, I.1
-
17
-
-
0019348832
-
Translational initiation in prokaryotes
-
Gold, L., Pribnow, D., Schneider, T., Shinedling, S., Singer, B. S. & Stormo, G. (1981). Translational initiation in prokaryotes. Annu Rev Microbiol 35, 365-403.
-
(1981)
Annu. Rev. Microbiol.
, vol.35
, pp. 365-403
-
-
Gold, L.1
Pribnow, D.2
Schneider, T.3
Shinedling, S.4
Singer, B.S.5
Stormo, G.6
-
18
-
-
0032942360
-
NahY, a catabolic plasmid-encoded receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene
-
Grimm, A. C. & Harwood, C. S. (1999). NahY, a catabolic plasmid-encoded receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene. J Bacteriol 181, 3310-3316.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 3310-3316
-
-
Grimm, A.C.1
Harwood, C.S.2
-
19
-
-
0026605537
-
CLUSTAL V: Improved software for multiple sequence alignment
-
Higgins, D. G., Bleasby, A. J. & Fuchs, R. (1992). CLUSTAL V: improved software for multiple sequence alignment. Comput Appl Biosci 8, 189-191.
-
(1992)
Comput. Appl. Biosci.
, vol.8
, pp. 189-191
-
-
Higgins, D.G.1
Bleasby, A.J.2
Fuchs, R.3
-
22
-
-
0033025509
-
Organization of genes for tetrapyrrole biosynthesis in Gram-positive bacteria
-
Johansson, P. & Hederstedt, L. (1999). Organization of genes for tetrapyrrole biosynthesis in Gram-positive bacteria. Microbiology 145, 529-538.
-
(1999)
Microbiology
, vol.145
, pp. 529-538
-
-
Johansson, P.1
Hederstedt, L.2
-
23
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
24
-
-
0017831492
-
Detection of hemoproteins in SDS-polyacrylamide gels
-
Moore, R. W., Welton, A. F. & Aust, S. D. (1978). Detection of hemoproteins in SDS-polyacrylamide gels. Methods Enzymol 52, 324-331.
-
(1978)
Methods Enzymol.
, vol.52
, pp. 324-331
-
-
Moore, R.W.1
Welton, A.F.2
Aust, S.D.3
-
25
-
-
0030614959
-
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
Nielsen, H., Engelbrecht, J., Brunak, S. & von Heijne, G. (1997). identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng 10, 1-6.
-
(1997)
Protein Eng.
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
von Heijne, G.4
-
26
-
-
0033764027
-
The DNA-binding characteristics of the Streptomyces reticuli regulator FurS depend on the redox state of its cysteine residues
-
Ortiz de Orué Lucana, D. & Schrempf, H. (2000). The DNA-binding characteristics of the Streptomyces reticuli regulator FurS depend on the redox state of its cysteine residues. Mol Gen Genet 264, 341-353.
-
(2000)
Mol. Gen. Genet.
, vol.264
, pp. 341-353
-
-
Ortiz de Orué Lucana, D.1
Schrempf, H.2
-
27
-
-
0037292954
-
Amino acid residues involved in reversible thiol formation and zinc ion binding in the Streptomyces reticuli redox regulator FurS
-
Ortiz de Orué Lucana, D., Troller, M. & Schrempf, H. (2003). Amino acid residues involved in reversible thiol formation and zinc ion binding in the Streptomyces reticuli redox regulator FurS. Mol Genet Genomics 268, 618-627.
-
(2003)
Mol. Genet. Genomics
, vol.268
, pp. 618-627
-
-
Ortiz de Orué Lucana, D.1
Troller, M.2
Schrempf, H.3
-
28
-
-
0036667415
-
A whole genome view of prokaryotic haem biosynthesis
-
Panek, H. & O'Brian, M. R. (2002). A whole genome view of prokaryotic haem biosynthesis. Microbiology 148, 2273-2282.
-
(2002)
Microbiology
, vol.148
, pp. 2273-2282
-
-
Panek, H.1
O'Brian, M.R.2
-
29
-
-
0004136246
-
-
2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning-a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
0032127435
-
Overlapping functions of components of a bacterial Sec-independent protein export pathway
-
Sargent, F., Bogsch, E. G., Stanley, N. R., Wexler, M., Robinson, C., Berks, B. C. & Palmer, T. (1998). Overlapping functions of components of a bacterial Sec-independent protein export pathway. EMBO J 17, 3640-3650.
-
(1998)
EMBO J.
, vol.17
, pp. 3640-3650
-
-
Sargent, F.1
Bogsch, E.G.2
Stanley, N.R.3
Wexler, M.4
Robinson, C.5
Berks, B.C.6
Palmer, T.7
-
31
-
-
0035174824
-
Twin-arginine translocation pathway in Streptomyces lividans
-
Schaerlaekens, K., Schierova, M., Lammertyn, E., Geukens, N., Anne J. & van Mellaert, L. (2001). Twin-arginine translocation pathway in Streptomyces lividans. J Bacteriol 183, 6727-6732.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6727-6732
-
-
Schaerlaekens, K.1
Schierova, M.2
Lammertyn, E.3
Geukens, N.4
Anné, J.5
van Mellaert, L.6
-
32
-
-
1642473932
-
The importance of the Tat-dependent protein secretion pathway in Streptomyces as revealed by phenotypic changes in tat deletion mutants and genome analysis
-
Schaerlaekens, K., van Mellaert, L., Lammertyn, E., Geukens, N. & Anne, J. (2004). The importance of the Tat-dependent protein secretion pathway in Streptomyces as revealed by phenotypic changes in tat deletion mutants and genome analysis. Microbiology 150, 21-3 1.
-
(2004)
Microbiology
, vol.150
, pp. 21-31
-
-
Schaerlaekens, K.1
van Mellaert, L.2
Lammertyn, E.3
Geukens, N.4
Anné, J.5
-
33
-
-
0026794509
-
Biochemical and electron microscopic studies of the Streptomyces reticuli cellulase (Avicelase) in its mycelium-associated and extra-cellular forms
-
Schlochtermeier, A., Niemeyer, F. & Schrempf, H. (1992a). Biochemical and electron microscopic studies of the Streptomyces reticuli cellulase (Avicelase) in its mycelium-associated and extra-cellular forms. Appl Environ Microbiol 58, 3240-3248.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 3240-3248
-
-
Schlochtermeier, A.1
Niemeyer, F.2
Schrempf, H.3
-
34
-
-
0026745984
-
The gene encoding the cellulase (Avicelase) Cell from Streptomyces reticuli and analysis of protein domains
-
Schlochtermeier, A., Walter, S., Schröder, J., Moorman, M. & Schrempf, H. (1992b). The gene encoding the cellulase (Avicelase) Cell from Streptomyces reticuli and analysis of protein domains. Mol Microbiol 6, 3611-3621.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 3611-3621
-
-
Schlochtermeier, A.1
Walter, S.2
Schröder, J.3
Moorman, M.4
Schrempf, H.5
-
35
-
-
0028112947
-
Multiple effects of haemin binding on protease susceptibility of bovine serum albumin and a novel isolation procedure for its large fragment
-
Shin, W. S., Yamashita, H. & Hirose, M. (1994). Multiple effects of haemin binding on protease susceptibility of bovine serum albumin and a novel isolation procedure for its large fragment. Biochem J 304, 81-86.
-
(1994)
Biochem. J.
, vol.304
, pp. 81-86
-
-
Shin, W.S.1
Yamashita, H.2
Hirose, M.3
-
36
-
-
0035025515
-
Detection of heme-binding proteins in epidemic strains of Burkholderia cepacia
-
Smalley, J. W., Charalabous, P., Birss, A. J. & Hart, C. A. (2001). Detection of heme-binding proteins in epidemic strains of Burkholderia cepacia. Clin Diagn Lab Immunol 8, 509-514.
-
(2001)
Clin. Diagn. Lab. Immunol.
, vol.8
, pp. 509-514
-
-
Smalley, J.W.1
Charalabous, P.2
Birss, A.J.3
Hart, C.A.4
-
37
-
-
0035156408
-
Antimicrobial properties of porphyrins
-
Stojiljkovic, I., Evavold, B. D. & Kumar, V. (2001). Antimicrobial properties of porphyrins. Expert Opin Investig Drugs 10, 309-320.
-
(2001)
Expert. Opin. Investig. Drugs
, vol.10
, pp. 309-320
-
-
Stojiljkovic, I.1
Evavold, B.D.2
Kumar, V.3
-
38
-
-
0026549146
-
Compilation and analysis of DNA sequences associated with apparent streptomycete promoters
-
Strohl, W. R. (1992). Compilation and analysis of DNA sequences associated with apparent streptomycete promoters. Nucleic Acids Res 20, 961-974.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 961-974
-
-
Strohl, W.R.1
-
39
-
-
0032553305
-
Molecular characterization of a newly identified heme-binding protein induced during differentiation of urine erythroleukemia cells
-
Taketani, S., Adachi, Y., Kohno, H., Ikehara, S., Tokunaga, R. & Ishii, T. (1998). Molecular characterization of a newly identified heme-binding protein induced during differentiation of urine erythroleukemia cells. J Biol Chem 273, 31388-31394.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 31388-31394
-
-
Taketani, S.1
Adachi, Y.2
Kohno, H.3
Ikehara, S.4
Tokunaga, R.5
Ishii, T.6
-
40
-
-
0037990786
-
Biogenesis of respiratory cytochromes in bacteria
-
Thony-Meyer, L. (1997). Biogenesis of respiratory cytochromes in bacteria. Microbiol Mol Biol Rev 61, 337-376.
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 337-376
-
-
Thony-Meyer, L.1
-
41
-
-
0024419124
-
Cloning of genes governing the deoxysugar portion of the erythromycin biosynthesis pathway in Saccharopolyspora erythraea (Streptomyces erythreus)
-
Vara, J., Lewandowska-Skarbek, M., Wang, Y.-G., Donadio, S. & Hutchinson, C. R. (1989). Cloning of genes governing the deoxysugar portion of the erythromycin biosynthesis pathway in Saccharopolyspora erythraea (Streptomyces erythreus). J Bacteriol 171, 5872-5881.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5872-5881
-
-
Vara, J.1
Lewandowska-Skarbek, M.2
Wang, Y.-G.3
Donadio, S.4
Hutchinson, C.R.5
-
42
-
-
0015500771
-
β-Galactosidase. In vivo α-complementation
-
Villarejo, M. R., Zamenhof, P. J. & Zabin, 1. (1972). β-Galactosidase. In vivo α-complementation. J Biol Chem 247, 2212-2216.
-
(1972)
J. Biol. Chem.
, vol.247
, pp. 2212-2216
-
-
Villarejo, M.R.1
Zamenhof, P.J.2
Zabin, I.3
-
43
-
-
0018972028
-
The relation of heme to catalase apoprotein synthesis in yeast
-
Woloszczuk, W., Sprinson, D. B. & Ruis, H. (1980). The relation of heme to catalase apoprotein synthesis in yeast. J Biol Chem 255, 2624-2627.
-
(1980)
J. Biol. Chem.
, vol.255
, pp. 2624-2627
-
-
Woloszczuk, W.1
Sprinson, D.B.2
Ruis, H.3
-
44
-
-
0035861496
-
The genome of the natural genetic engineer Agrobacterium tumefaciens C58
-
and 48 other authors
-
Wood, D. W., Setubal, J. C., Kaul, R. & 48 other authors (2001). The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Science 294, 2317-2323.
-
(2001)
Science
, vol.294
, pp. 2317-2323
-
-
Wood, D.W.1
Setubal, J.C.2
Kaul, R.3
-
45
-
-
0342872072
-
Novel organization of catechol meta-pathway genes in Sphingomonas sp. HV3 pSKY4 plasmid
-
Yrjala, K., Paulin, L. & Romantschuk, M. (1997). Novel organization of catechol meta-pathway genes in Sphingomonas sp. HV3 pSKY4 plasmid. FEMS Microbiol Lett 154, 403-408.
-
(1997)
FEMS Microbiol. Lett.
, vol.154
, pp. 403-408
-
-
Yrjala, K.1
Paulin, L.2
Romantschuk, M.3
-
46
-
-
0034033246
-
The heme-independent manganese-peroxidase activity depends on the presence of the C-terminal domain within the Streptomyces reticuli catalase-peroxidase CpeB
-
Zou, P. & Schrempf, H. (2000). The heme-independent manganese-peroxidase activity depends on the presence of the C-terminal domain within the Streptomyces reticuli catalase-peroxidase CpeB. Eur J Biochem 267, 2840-2849.
-
(2000)
Eur. J. Biochem.
, vol.267
, pp. 2840-2849
-
-
Zou, P.1
Schrempf, H.2
-
47
-
-
0033026250
-
The mycelium-associated Streptomyces reticuli catalase-peroxidase, its gene and regulation by FurS
-
Zou, P., Borovok, I., Ortiz de Oru ́Lucana, D., Müller, D. & Schrempf, H. (1999). The mycelium- associated Streptomyces reticuli catalase-peroxidase, its gene and regulation by FurS. Microbiology 145, 549-559.
-
(1999)
Microbiology
, vol.145
, pp. 549-559
-
-
Zou, P.1
Borovok, I.2
Ortiz de Orué Lucana, D.3
Müller, D.4
Schrempf, H.5
|