Detection of rare paternal chloroplast inheritance in controlled crosses of the endangered sunflower Helianthus verticillatus

Heredity

Volumn 100, Issue 6, 2008, Pages 574-580

  Ellis, J R ^a   Bentley, K E ^a   McCauley, D E ^a  

^a VANDERBILT UNIVERSITY   (United States)

Author keywords

Chloroplast DNA; Endangered species; Helianthus; Heteroplasmy; Maternal inheritance; Paternal leakage

Indexed keywords

CHLOROPLAST DNA;

CHLOROPLAST; COMPARATIVE STUDY; DETECTION METHOD; DICOTYLEDON; DNA; ENDANGERED SPECIES; EVOLUTIONARY BIOLOGY; GENOME; GREENHOUSE ECOSYSTEM; HERITABILITY; HYBRIDIZATION; PHYLOGEOGRAPHY; RARE SPECIES; SEED DISPERSAL; TAXONOMY;

ARTICLE; CHLOROPLAST; CROSS BREEDING; EXTRACHROMOSOMAL INHERITANCE; GENETICS; SUNFLOWER;

CHLOROPLASTS; CROSSES, GENETIC; DNA, CHLOROPLAST; EXTRACHROMOSOMAL INHERITANCE; HELIANTHUS;

HELIANTHUS; HELIANTHUS VERTICILLATUS; MAGNOLIOPHYTA;

EID: 44349159427     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/hdy.2008.11     Document Type: Article

References (62)

1. Birky CW (1995). Uniparental inheritance of mitochondrial and chloroplast genes: mechanisms and evolution. Proc Nat Acad Sci USA 92: 11331-11338.
2. Birky CW (2001). The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models. Annu Rev Gen 35: 125-148.
3. Birky CW, Fuerst P, Maruyama T (1989). Organelle gene diversity under migration, mutation, and drift - equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes. Genetics 121: 613-627.
4. Birky CW, Maruyama T, Fuerst P (1983). An approach to population and evolutionary genetic theory for genes in mitochondria and chloroplasts, and some results. Genetics 103: 513-527.
5. Bryan GJ, McNicoll J, Ramsay G, Meyer RC (1999). Polymorphic simple sequence repeat markers in chloroplast genomes of Solanaceous plants. Theor Appl Genet 99: 859-867.
6. Chapman MA, Burke JM (2006). Letting the gene out of the bottle: the population genetics of genetically modified crops. New Phytol 170: 429-443.
7. Corriveau JL, Coleman AW (1988). Rapid screening method to detect potential biparental inheritance of plastid DNA and results for over 200 angiosperm species. Am J Bot 75: 1443-1458.
8. Cruzan MB, Arnold ML, Carney SE, Wollenberg KR (1993). cpDNA inheritance in interspecific crosses and evolutionary inference in Louisiana Irises. Am J Bot 80: 344-350.
9. Daniell H, Kumar S, Dufourmantel N (2005). Breakthrough in chloroplast genetic engineering of agronomically important crops. Trends Biotechnol 23: 238-245.
10. Dobeš CH, Mitchell-Olds T, Koch MA (2004). Extensive chloroplast haplotype variation indicates Pleistocene hybridization and radiation of North American Arabis drummondii, A. x divaricarpa, and A-holboellii (Brassicaceae). Mol Ecol 13: 349-370.
11. Edwards-Burke MA, Hamrick JL, Price RA (1997). Frequency and direction of hybridization in sympatric populations of Pinus taeda and P. echinata (Pinaceae). Am J Bot 75: 1143-1458.
12. Ellis JR, Pashley CH, Burke JM, McCauley DE (2006). High genetic diversity in a rare and endangered sunflower as compared to a common congener. Mol Ecol 15: 2345-2355.
13. Frey JE, Frey B, Forcioli D (2005). Quantitative assessment of heteroplasmy levels in Senecio vulgaris chloroplast DNA. Genetica 123: 255-261.
14. Gressel J (1999). Tandem constructs: preventing the rise of superweeds. Trends Biotechnol 17: 361-366.
15. Grevich JJ, Daniell H (2005). Chloroplast genetic engineering: recent advances and future perspectives. Crit Rev Plant Sci 24: 83-107.
16. Hamilton MB, Miller JR (2002). Comparing relative rates of pollen and seed gene flow in the island model using nuclear and organelle measures of population structure. Genetics 162: 1897-1909.
17. Hansen AK, Escobar LK, Gilbert LE, Jansen RK (2007). Paternal, maternal, and biparental inheritance of the chloroplast genome in Passiflora (Passifloraceae): implications for phylogenetic studies. Am J Bot 94: 42-46.
18. Hansen AK, Gilbert LE, Simpson BB, Downie SR, Cervi AC, Jansen RK (2006). Phylogenetic relationships and chromosome number evolution in Passiflora. Syst Bot 31: 138-150.
19. Hattori N, Kitagawa K, Takumi S, Nakamura C (2002). Mitochondrial DNA heteroplasmy in wheat, Aegilops and their nucleus-cytoplasm hybrids. Genetics 160: 1619-1630.
20. Haygood RA, Ives AR, Andow DA (2004). Population genetics of transgene containment. Ecol Lett 7: 213-220.
21. Johnson LB, Palmer JD (1989). Heteroplasmy of chloroplast DNA in Medicago. Plant Mol Biol 12: 3-11.
22. Kelchner SA (2000). The evolution of non-coding chloroplast DNA and its application to plant systematics. Ann Mo Bot Gard 87: 482-498.
23. Matthews JF, Allison JR, Ware RT, Nordman C (2002). Helianthus verticillatus Small (Asteraceae) rediscovered and redescribed. Castanea 67: 13-24.
24. McCauley DE (1995). The use of chloroplast DNA polymorphism in studies of gene flow in plants. Trends Ecol Evol 10: 198-202.
25. McCauley DE, Bailey MF, Sherman NA, Darnell MZ (2005). Evidence for paternal transmission and heteroplasmy in the mitochondrial genome of Silene vulgaris, a gynodioecious plant. Heredity 95: 50-58.
26. McCauley DE, Sundby AK, Bailey MF, Welch ME (2007). The inheritance of chloroplast DNA is not strictly maternal in Silene vulgaris (Caryophyllaceae): evidence from experimental crosses and natural populations. Am J Bot 94: 1333-1337.
27. Medgyesy P, Pay A, Marton L (1986). Transmission of paternal chloroplasts in Nicottana. Mol Gen Genet 204: 195-198.
28. Milligan BG (1992). Is organelle DNA strictly maternally inherited? Power analysis of a binomial distribution. Am J Bot 79: 1325-1328.
29. Mogensen HL (1996). The hows and whys of cytoplasmic inheritance in seed plants. Am J Bot 83: 383-404.
30. Olmstead RG, Palmer JD (1994). Chloroplast DNA systematics: a review of methods and data analysis. Am J Bot 81: 1205-1224.
31. Ouborg NJ, Piquot Y, Van Groenendael JM (1999). Population genetics, molecular markers and the study of dispersal in plants. J Ecol 87: 551-568.
32. Pashley CH, Ellis JR, McCauley DE, Burke JM (2006). EST databases as a source for molecular markers: lessons from Helianthus. J Heredity 97: 381-388.
33. Petit RJ, Duminil J, Fineschi S, Hampe A, Salvinin D, Vendramin GG (2005). Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Mol Ecol 14: 689-701.
34. Petit RJ, Kremer A, Wagner DB (1993). Finite island model for organelle and nuclear genes in plants. Heredity 71: 630-641.
35. Provan JW, Powell W, Hollingsworth PM (2001). Chloroplast microsatellites: new tools for studies in plant ecology and evolution. Trends Ecol Evol 16: 142-147.
36. Reboud X, Zeyl C (1994). Organelle inheritance in plants. Heredity 72: 132-140.
37. Rieseberg LH (1991). Homoploid reticulate evolution in Helianthus (Asteraceae): evidence from ribosomal genes. Am J Bot 78: 1218-1237.
38. Rieseberg LH, Ellstrand NC (1993). What can molecular and morphological markers tell us about plant hybridization? Crit Rev Plant Sci 12: 213-241.
39. Rieseberg LH, Sinervo B, Linder CR, Ungerer MC, Arias DM (1996). Role of gene interactions in hybrid speciation: evidence from ancient and experimental hybrids. Science 272: 741-745.
40. Rieseberg LH, Van Fossen C, Arias D, Carter RL (1994). Cytoplasmic male-sterility in sunflower-origin, inheritance, and frequency in natural populations. J Heredity 85: 233-238.
41. Rieseberg LH, Van Fossen C, Desrochers AM (1995). Hybrid speciation accompanied by genomic reorganization in wild sunflowers. Nature 375: 313-316.
42. Röhr H, Kues U, Stahl U (1998). Organelle DNA of plants and fungi: inheritance and recombination. Prog Bot 60: 39-87.
43. Schilling EE, Linder CR, Noyes RD, Rieseberg LH (1998). Phylogenetic relationships in Helianthus (Asteraceae) based on nuclear ribosomal DNA internal transcribed spacer region sequence data. Syst Bot 23: 177-187.
44. Schuelke M (2000). An economic method for the fluorescent labeling of PCR fragments. Nat Biotechnol 18: 233-234.
45. Sears BB (1980). Elimination of plastids during spermatogenesis and fertilization in the plant kingdom. Plasmid 4: 233-255.
46. Shore JS, McQueen KL, Little SH (1994). Inheritance of plastid DNA in the Turnera-ulmifolia complex (Turneraceae). Am J Bot 81: 1636-1639.
47. Shore JS, Triassi M (1998). Paternally biased cpDNA inheritance in Turnera ulmifolia (Turneraceae). Am J Bot 85: 328-332.
48. Simmonds NW (1969). Variegated mutant plastid chimeras of potatoes. Heredity 24: 303-306.
49. Smith SE (1989). Biparental inheritance of organelles and its implications for crop improvement. Plant Breed Rev 6: 361-393.
50. Soliman K, Fedak G, Allard RW (1987). Inheritance of organelle DNA in Barley and Hordeum x Secale intergeneric hybrids. Genome 29: 867-872.
51. Soltis DE, Kuzoff RK (1995). Discordance between nuclear and chloroplast phylogenies in the Heuchera group (Saxifragaceae). Evolution 49: 727-742.
52. Tilney-Bassett RAE (1978). The inheritance and genetic behavior of plastids. In: Kirk JTO, Tilney-Bassett RAE (eds). The Plastids. Their Chemistry, Structure, Growth and Inheritance. Elsevier: New York, NY. pp 251-524.
53. Tsitrone A, Kirkpatrick M, Levin DA (2003). A model for chloroplast capture. Evolution 57: 1776-1782.
54. Vaillancourt RE, Petty A, McKinnon GE (2004). Maternal inheritance of mitochondria in Eucalyptus globulus. J Heredity 95: 353-355.
55. Van Droogenbroeck B, Kyndt T, Romeijn-Peeters E, Van Thuyne W, Goetghebeur P, Romero-Motochi JP et al. (2006). Evidence of natural hybridization and introgression between Vasconcellea species (Caricaceae) from southern Ecuador revealed by chloroplast, mitochondrial and nuclear DNA markers. Ann Bot 97: 793-805.
56. Van Droogenbroeck B, Maertens I, Haegeman A, Kyndt T, O'brien C, Drew RA et al. (2005). Maternal inheritance of cytoplasmic organelles in intergeneric hybrids of Carica papaya L. and Vasconcellea spp. (Caricaceae Dumort., Brassicales). Euphytica 143: 161-168.
57. Weising K, Gardner RC (1999). A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome 42: 9-19.
58. Welch ME, Darnell MZ, McCauley DE (2006). Variable populations within variable populations: quantifying mitochondrial heteroplasmy in natural populations of the gynodioecious plant Silene vulgaris. Genetics 174: 829-837.
59. Welch ME, Rieseberg LH (2002). Habitat divergence between a homoploid hybrid sunflower species, Helianthus paradoxus (Asteraceae), and its progenitors. Am J Bot 89: 472-478.
60. Wills DM, Hester ML, Liu AZ, Burke JM (2005). Chloroplast SSR polymorphisms in the Compositae and the mode of organellar inheritance in Helianthus annuus. Theor Appl Genet 110: 941-947.
61. Wolfe AD, Randle CP (2004). Recombination, heteroplasmy, haplotype polymorphism, and paralogy in plastid genes: Implications for plant molecular systematics. Syst Bot 29: 1011-1020.
62. Zhang Q, Liu Y, Sodmergen (2003). Examination of the cytoplasmic DNA in male reproductive cells to determine the potential for cytoplasmic inheritance in 295 angiosperm species. Plant Cell Phys 44: 941-951.