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Volumn 71, Issue 1, 2008, Pages 71-79

Changes in the proteome of Huh7 cells induced by transient expression of hepatitis D virus RNA and antigens

Author keywords

2 DE; Hepatitis D virus; Liver; Proteome analysis

Indexed keywords

ADENYLATE KINASE 2B; ALPHA CENTRACTIN; CYCLINE; CYTOCHROME B5 REDUCTASE; CYTOKERATIN 8; DOPAMINE RECEPTOR INTERACTING PROTEIN 4; GENE PRODUCT; HEAT SHOCK PROTEIN 60; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D; LIPOCORTIN 4; OVALBUMIN; PEROXIREDOXIN 4 TRIOSEPHOSPHATE ISOMERASE; PROTEIN HSP105; PROTEIN TRIM28; THIOL SPECIFIC REDUCTASE; TRIOSEPHOSPHATE ISOMERASE; TUBULIN ALPHA6; VIGILIN; VIRUS ANTIGEN; VIRUS RNA;

EID: 43849106020     PISSN: 18743919     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jprot.2007.12.002     Document Type: Article
Times cited : (17)

References (40)
  • 3
    • 0027973691 scopus 로고
    • Advances in hepatitis D virus biology and disease
    • Smedile A., Rizzetto M., and Gerin J. Advances in hepatitis D virus biology and disease. Prog Liver Dis 12 (1994) 157-175
    • (1994) Prog Liver Dis , vol.12 , pp. 157-175
    • Smedile, A.1    Rizzetto, M.2    Gerin, J.3
  • 4
    • 0037388448 scopus 로고    scopus 로고
    • Replication of the hepatitis delta virus: recent developments
    • Taylor J.M. Replication of the hepatitis delta virus: recent developments. Trends Microbiol 11 (2003) 185-190
    • (2003) Trends Microbiol , vol.11 , pp. 185-190
    • Taylor, J.M.1
  • 6
    • 0036200431 scopus 로고    scopus 로고
    • Rolling circle replication of hepatitis delta virus RNA is carried out by two different cellular RNA polymerases
    • Macnaughton T.B., Shi S.T., Modahl L.E., and Lai M.M. Rolling circle replication of hepatitis delta virus RNA is carried out by two different cellular RNA polymerases. J Virol 76 (2002) 3920-3927
    • (2002) J Virol , vol.76 , pp. 3920-3927
    • Macnaughton, T.B.1    Shi, S.T.2    Modahl, L.E.3    Lai, M.M.4
  • 7
    • 0034795887 scopus 로고    scopus 로고
    • Host RNA polymerase requirements for transcription of the human hepatitis delta virus genome
    • Moradela G., and Taylor J. Host RNA polymerase requirements for transcription of the human hepatitis delta virus genome. J Virol 75 (2001) 10161-10169
    • (2001) J Virol , vol.75 , pp. 10161-10169
    • Moradela, G.1    Taylor, J.2
  • 8
    • 0028826113 scopus 로고
    • Hepatitis delta virus RNA editing: specific modification of adenosine in the antigenomic RNA
    • Casey J.L., and Gerin J.L. Hepatitis delta virus RNA editing: specific modification of adenosine in the antigenomic RNA. J Virol 69 (1995) 7593-7600
    • (1995) J Virol , vol.69 , pp. 7593-7600
    • Casey, J.L.1    Gerin, J.L.2
  • 9
    • 0026653506 scopus 로고
    • Identification of a prenylation site in the delta virus large antigen
    • Glenn J.S., Watson J.A., Havel C.M., and White J.O. Identification of a prenylation site in the delta virus large antigen. Science, 256 (1992) 1331-1333
    • (1992) Science , vol.256 , pp. 1331-1333
    • Glenn, J.S.1    Watson, J.A.2    Havel, C.M.3    White, J.O.4
  • 10
    • 0038082376 scopus 로고    scopus 로고
    • Differential inhibition of RNA editing in hepatitis delta virus genotype III by the short and long forms of hepatitis delta antigen
    • Cheng Q., Jayan G.C., and Casey J.L. Differential inhibition of RNA editing in hepatitis delta virus genotype III by the short and long forms of hepatitis delta antigen. J Virol 77 (2003) 7786-7795
    • (2003) J Virol , vol.77 , pp. 7786-7795
    • Cheng, Q.1    Jayan, G.C.2    Casey, J.L.3
  • 11
    • 0032500589 scopus 로고    scopus 로고
    • Identification and characterization of the RNA chaperone activity of hepatitis delta antigen peptides
    • Huang Z.S., and Wu H.N. Identification and characterization of the RNA chaperone activity of hepatitis delta antigen peptides. J Biol Chem 273 41 (1998) 26455-26461
    • (1998) J Biol Chem , vol.273 , Issue.41 , pp. 26455-26461
    • Huang, Z.S.1    Wu, H.N.2
  • 12
    • 6644222520 scopus 로고    scopus 로고
    • Stimulation of RNA polymerase II elongation by hepatitis delta antigen
    • Yamaguchi Y., Filipovska J., Yano K., Furuya A., Inukai N., Narita T., et al. Stimulation of RNA polymerase II elongation by hepatitis delta antigen. Science 293 (2001) 124-127
    • (2001) Science , vol.293 , pp. 124-127
    • Yamaguchi, Y.1    Filipovska, J.2    Yano, K.3    Furuya, A.4    Inukai, N.5    Narita, T.6
  • 13
    • 0026049581 scopus 로고
    • The large form of hepatitis δ antigen is crucial for the assembly of hepatitis δ virus
    • Chang F.L., Chen P.J., Tu S.J., Wang C.J., and Chen D.S. The large form of hepatitis δ antigen is crucial for the assembly of hepatitis δ virus. Proc Natl Acad Sci U S A 88 (1991) 8490-8494
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 8490-8494
    • Chang, F.L.1    Chen, P.J.2    Tu, S.J.3    Wang, C.J.4    Chen, D.S.5
  • 14
    • 0029763579 scopus 로고    scopus 로고
    • A cellular homolog of hepatitis delta antigen: implications for viral replication and evolution
    • Brazas R., and Ganem D. A cellular homolog of hepatitis delta antigen: implications for viral replication and evolution. Science 274 (1996) 90-94
    • (1996) Science , vol.274 , pp. 90-94
    • Brazas, R.1    Ganem, D.2
  • 15
    • 33751000460 scopus 로고    scopus 로고
    • Binding of the polypyrimidine tract-binding protein-associated splicing factor (PSF) to the hepatitis delta virus RNA
    • Greco-Stewart V.S., Thibault C.S.t.L., and Pelchat M. Binding of the polypyrimidine tract-binding protein-associated splicing factor (PSF) to the hepatitis delta virus RNA. Virology 356 (2006) 35-44
    • (2006) Virology , vol.356 , pp. 35-44
    • Greco-Stewart, V.S.1    Thibault, C.S.t.L.2    Pelchat, M.3
  • 16
    • 0032571350 scopus 로고    scopus 로고
    • The nucleolin binding activity of hepatitis delta antigen is associated with nucleolus targeting
    • Lee C.H., Chang S.C., Chen C.J., and Chang M.F. The nucleolin binding activity of hepatitis delta antigen is associated with nucleolus targeting. J Biol Chem 273 (1998) 7650-7656
    • (1998) J Biol Chem , vol.273 , pp. 7650-7656
    • Lee, C.H.1    Chang, S.C.2    Chen, C.J.3    Chang, M.F.4
  • 17
    • 0037069441 scopus 로고    scopus 로고
    • Replicating hepatitis delta virus RNA is edited in the nucleus by the small form of ADAR1
    • Wong S.K., and Lazinski D. Replicating hepatitis delta virus RNA is edited in the nucleus by the small form of ADAR1. Proc Natl Acad Sci U S A 99 23 (2002) 15118-15123
    • (2002) Proc Natl Acad Sci U S A , vol.99 , Issue.23 , pp. 15118-15123
    • Wong, S.K.1    Lazinski, D.2
  • 18
    • 0027483027 scopus 로고
    • Relating structure to function in the hepatitis delta virus antigen
    • Lazinski D., and Taylor J. Relating structure to function in the hepatitis delta virus antigen. J Virol 67 (1993) 2672-2680
    • (1993) J Virol , vol.67 , pp. 2672-2680
    • Lazinski, D.1    Taylor, J.2
  • 19
    • 0028301852 scopus 로고
    • Expression of hepatitis delta virus RNA deletions: cis and trans requirements for self-cleavage, ligation, and RNA packaging
    • Lazinski D., and Taylor J. Expression of hepatitis delta virus RNA deletions: cis and trans requirements for self-cleavage, ligation, and RNA packaging. J Virol 68 (1994) 2879-2888
    • (1994) J Virol , vol.68 , pp. 2879-2888
    • Lazinski, D.1    Taylor, J.2
  • 20
    • 0031799296 scopus 로고    scopus 로고
    • Localization of hepatitis delta virus RNA in the nucleus of human cells
    • Cunha C., Monjardino J., Chang D., Krause S., and Carmo-Fonseca M. Localization of hepatitis delta virus RNA in the nucleus of human cells. RNA 4 (1998) 680-693
    • (1998) RNA , vol.4 , pp. 680-693
    • Cunha, C.1    Monjardino, J.2    Chang, D.3    Krause, S.4    Carmo-Fonseca, M.5
  • 22
    • 0034690931 scopus 로고    scopus 로고
    • Use of mass spectrometry to study signalling pathways
    • Pandey A., Andersen J.S., and Mann M. Use of mass spectrometry to study signalling pathways. Sci STKE 37 (2000) PL1
    • (2000) Sci STKE , vol.37
    • Pandey, A.1    Andersen, J.S.2    Mann, M.3
  • 23
    • 33645698431 scopus 로고    scopus 로고
    • Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: search for novel biomarkers of cystic fibrosis lung disease
    • Roxo-Rosa M., da Costa G., Luider T.M., Scholte B.J., Coelho A.V., Amaral M.D., and Penque D. Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: search for novel biomarkers of cystic fibrosis lung disease. Proteomics 6 7 (2006) 2314-2325
    • (2006) Proteomics , vol.6 , Issue.7 , pp. 2314-2325
    • Roxo-Rosa, M.1    da Costa, G.2    Luider, T.M.3    Scholte, B.J.4    Coelho, A.V.5    Amaral, M.D.6    Penque, D.7
  • 25
    • 0025165230 scopus 로고
    • Cloning and expression of an immunodominant region of the hepatitis delta antigen
    • Saldanha J., Homer E., Goldin P., Thomas H.C., and Monjardino J. Cloning and expression of an immunodominant region of the hepatitis delta antigen. J Gen Virol 71 (1990) 471-475
    • (1990) J Gen Virol , vol.71 , pp. 471-475
    • Saldanha, J.1    Homer, E.2    Goldin, P.3    Thomas, H.C.4    Monjardino, J.5
  • 26
    • 33847782587 scopus 로고    scopus 로고
    • Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry
    • Molina H., Horn D.M., Tang N., Mathivanan S., and Pandey A. Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry. Proc Natl Acad Sci U S A 104 (2007) 2199-4704
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 2199-4704
    • Molina, H.1    Horn, D.M.2    Tang, N.3    Mathivanan, S.4    Pandey, A.5
  • 27
    • 0042804874 scopus 로고    scopus 로고
    • Phosphorylation of human Fen1 by cyclin-dependent kinase modulates its role in replication fork regulation
    • Henneke G., Koundrioukoff S., and Hübscher U. Phosphorylation of human Fen1 by cyclin-dependent kinase modulates its role in replication fork regulation. Oncogene 22 28 (2003) 4301-4313
    • (2003) Oncogene , vol.22 , Issue.28 , pp. 4301-4313
    • Henneke, G.1    Koundrioukoff, S.2    Hübscher, U.3
  • 29
    • 0038333588 scopus 로고    scopus 로고
    • Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides
    • Gevaert K., Goethals M., Martens L., Van Damme J., Staes A., Thomas G.R., et al. Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. Nat Biotechnol 21 (2003) 566-569
    • (2003) Nat Biotechnol , vol.21 , pp. 566-569
    • Gevaert, K.1    Goethals, M.2    Martens, L.3    Van Damme, J.4    Staes, A.5    Thomas, G.R.6
  • 30
    • 0033832421 scopus 로고    scopus 로고
    • Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates
    • Matzke M.A., Mette M.F., and Matzke A.J.M. Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates. Plant Mol Biol 43 (2000) 401-415
    • (2000) Plant Mol Biol , vol.43 , pp. 401-415
    • Matzke, M.A.1    Mette, M.F.2    Matzke, A.J.M.3
  • 31
    • 84984550587 scopus 로고    scopus 로고
    • The double-stranded RNA-activated kinase, PKR, can phosphorylate hepatitis D virus small delta antigen at functional serine and threonine residues
    • Chen C.W., Tsay Y.G., Wu H.L., Lee C.H., Chen D.S., and Chen P.J. The double-stranded RNA-activated kinase, PKR, can phosphorylate hepatitis D virus small delta antigen at functional serine and threonine residues. J Biol Chem 277 (2002) 33058-33067
    • (2002) J Biol Chem , vol.277 , pp. 33058-33067
    • Chen, C.W.1    Tsay, Y.G.2    Wu, H.L.3    Lee, C.H.4    Chen, D.S.5    Chen, P.J.6
  • 32
    • 0030965882 scopus 로고    scopus 로고
    • Surprising specificity of PKR binding to delta agent genomic RNA
    • Circle D.A., Neel O.D., Robertson H.D., Clarke P.A., and Mathews M.B. Surprising specificity of PKR binding to delta agent genomic RNA. RNA 3 (1997) 438-448
    • (1997) RNA , vol.3 , pp. 438-448
    • Circle, D.A.1    Neel, O.D.2    Robertson, H.D.3    Clarke, P.A.4    Mathews, M.B.5
  • 33
    • 0030013732 scopus 로고    scopus 로고
    • Paradoxical interactions between human delta hepatitis agent RNA and the cellular protein kinase PKR
    • Robertson H.D., Manche L., and Mathews M.B. Paradoxical interactions between human delta hepatitis agent RNA and the cellular protein kinase PKR. J Virol 70 (1996) 5611-5617
    • (1996) J Virol , vol.70 , pp. 5611-5617
    • Robertson, H.D.1    Manche, L.2    Mathews, M.B.3
  • 34
    • 0036232590 scopus 로고    scopus 로고
    • Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA
    • Yamaguchi Y., Inukai N., Narita T., Wada T., and Handa H. Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA. Mol Cell Biol 22 (2002) 2918-2927
    • (2002) Mol Cell Biol , vol.22 , pp. 2918-2927
    • Yamaguchi, Y.1    Inukai, N.2    Narita, T.3    Wada, T.4    Handa, H.5
  • 35
    • 32144459838 scopus 로고    scopus 로고
    • Proteome analysis of human liver carcinoma cells harboring hepatitis C virus subgenomic replicon
    • Fang C., Yi Z., Liu F., Lan S., Wang J., Lu H., et al. Proteome analysis of human liver carcinoma cells harboring hepatitis C virus subgenomic replicon. Proteomics 6 (2006) 519-527
    • (2006) Proteomics , vol.6 , pp. 519-527
    • Fang, C.1    Yi, Z.2    Liu, F.3    Lan, S.4    Wang, J.5    Lu, H.6
  • 36
    • 3943086339 scopus 로고    scopus 로고
    • Flap endonuclease 1: a central component of DNA metabolism
    • Liu Y., Kao H.I., and Bambara R.H. Flap endonuclease 1: a central component of DNA metabolism. Ann Rev Biochem 73 (2004) 589-615
    • (2004) Ann Rev Biochem , vol.73 , pp. 589-615
    • Liu, Y.1    Kao, H.I.2    Bambara, R.H.3
  • 37
    • 33846031596 scopus 로고    scopus 로고
    • CKAP4/p63 is a receptor for the Frizzled-8 protein-related antiproliferative factor from interstitial cystitis patients
    • Conrads T.P., Tocci G.M., Hood B.L., Zhang C.O., Guo L., Koch K.R., et al. CKAP4/p63 is a receptor for the Frizzled-8 protein-related antiproliferative factor from interstitial cystitis patients. J Biol Chem 28 (2006) 37836-37843
    • (2006) J Biol Chem , vol.28 , pp. 37836-37843
    • Conrads, T.P.1    Tocci, G.M.2    Hood, B.L.3    Zhang, C.O.4    Guo, L.5    Koch, K.R.6
  • 38
    • 33745956840 scopus 로고    scopus 로고
    • Synthetic small interfering RNA targeting heat shock protein 105 induces apoptosis of various cancer cells both in vitro and in vivo
    • Hosaka S., Nakatsura T., Tsukamoto H., Hatayama T., Baba H., and Nishimura Y. Synthetic small interfering RNA targeting heat shock protein 105 induces apoptosis of various cancer cells both in vitro and in vivo. Cancer Sci 97 7 (2006) 623-632
    • (2006) Cancer Sci , vol.97 , Issue.7 , pp. 623-632
    • Hosaka, S.1    Nakatsura, T.2    Tsukamoto, H.3    Hatayama, T.4    Baba, H.5    Nishimura, Y.6
  • 39
    • 0033565383 scopus 로고    scopus 로고
    • Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element
    • Loflin P.A., Chen C.Y.A., and Shyu A.B. Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element. Genes Dev 13 (1999) 1884-1897
    • (1999) Genes Dev , vol.13 , pp. 1884-1897
    • Loflin, P.A.1    Chen, C.Y.A.2    Shyu, A.B.3
  • 40
    • 0034806974 scopus 로고    scopus 로고
    • Versatile role for hnRNP D isoforms in the differential regulation of cytoplasmic mRNA turnover
    • Xu N., Chen C., and Shyu A. Versatile role for hnRNP D isoforms in the differential regulation of cytoplasmic mRNA turnover. Mol Cell Biol 21 (2001) 6960-6971
    • (2001) Mol Cell Biol , vol.21 , pp. 6960-6971
    • Xu, N.1    Chen, C.2    Shyu, A.3


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