Genetic differentiation among Hemarthria compressa populations in south China and its genetic relationship with H. japonica

Hereditas

Volumn 145, Issue 2, 2008, Pages 84-91

  Huang, Lin Kai ^a   Zhang, Xin Quan ^a   Ma, Xiao ^a   Liu, Wei ^a   Li, Fang ^a   Zeng, Bing ^a  

^a SICHUAN AGRICULTURAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; PRIMER DNA;

ARTICLE; CHINA; CLONAL VARIATION; CONTROLLED STUDY; GENE AMPLIFICATION; GENE FLOW; GENETIC DISTANCE; GENETIC VARIABILITY; GENOTYPE; GRASS; INTER SIMPLE SEQUENCE REPEAT; MOLECULAR PHYLOGENY; NONHUMAN; POLYMORPHIC LOCUS; POPULATION; SPECIES DIFFERENTIATION;

CHINA; GENETICS, POPULATION; MINISATELLITE REPEATS; PHYLOGENY; POACEAE; VARIATION (GENETICS);

HEMARTHRIA; HEMARTHRIA COMPRESSA; JAPONICA;

EID: 43849102132     PISSN: 00180661     EISSN: 16015223     Source Type: Journal    
DOI: 10.1111/j.0018-0661.2008.02031.x     Document Type: Article

References (37)

1. Auge H., Neuffer B., Erlinghagen F. et al., (2001). Demographic and random amplified polymorphic DNA analyses reveal high levels of genetic diversity in a clonal violet. Mol. Ecol. 10: 1811-1819.
2. Balloux F., Lehmann L. and DeMeeus T., (2003). The population genetics of clonal and partially clonal diploids. Genetics 164: 1635-1644.
3. Bengtsson B.O., (2003). Genetic variation in organisms with sexual and asexual reproduction. J. Evol. Biol. 16: 189-199.
4. Bornet B. and Branchard M., (2004). Use of ISSR fingerprints to detect microsatellites and genetic diversity in several related Brassica taxa and Arabidopsis thaliana. Hereditas 140: 245-247.
5. Camacho F. J. and Liston A., (2001). Population structure and genetic diversity of Botrychium pumicola (Ophioglossaceae) based on inter-simple sequence repeats (ISSR). Am. J. Bot. 88: 1065-1070.
6. Chen Y.-X., Zhang X.-Q., Yang C.-H. et al., (2005). The study on morphologic diversity of wild Hemarhria compressa from southwest China. Grassland China 27: 77-79.
7. Doyle J., (1991). DNA protocols for plants - CTAB total DNA isolation. In: Molecular techniques in taxonomy, (eds G. M. Hewitt and A. Johnston), Springer, pp. 283-293.
8. Ellstrand N. C. and Roose M. L., (1987). Patterns of genotypic diversity in clonal plant species. Am. J. Bot. 74: 123-131.
9. Excoffier L., Smouse P. E. and Quattro J. M., (1992). Analysis of molecular variance inferred from metric distance among DNA haplotypes: application to human mitochondria DNA restriction sites. Genetics 131: 479-491.
10. Fager E. W., (1972). Diversity: A sampling study. Am. Nat. 106: 293-310.
11. Gupta M., Chyi Y. S, Romero-Severson J. et al., (1994). Amplification of DNA markers from evolutionarily diverse genomesusing single primers of imple-sequence repeats. Theor. Appl. Genet. 89: 998-1006.
12. Hamrick J. L. and Godt M. J. W., (1990). Allozyme diversity in plant species. In: Plant population genetics, breeding, and genetic resources, (eds A. H. D. Brown, M. T. Clegg, A. L. Kahler et al), Sinauer, pp. 43-63.
13. Han Y.-C., Teng C.-Z., Zhong S. et al., (2007). Genetic variation and clonal diversity in populations of Nelumbo nucifera (Nelumbonaceae) in central China detected by ISSR markers. Aquat. Bot. 86: 69-75.
14. Lamote V., Roldan-Ruiz I. and Coart E., (2002). A study of genetic variation in Iris pseudacorus populations using amplified fragment length polymorphisms (AFLPs). Aquat. Bot. 73: 19-31.
15. Li A. and Ge S., (2001). Genetic variation and clonal diversity of Psammochloa villosa (Poaceae) detected by ISSR markers. Ann. Bot. 87: 585-590.
16. Liston A., Wilson B. L., Robinson W. A. et al., (2003). The relative importance of sexual reproduction versus clonal spread in an aridland bunchgrass. Oecologia 137: 216-225.
17. Liu J., Zhang X.-Q., Peng Y. et al., (2006). AFLP analysis about genetic diversity of Hemarthria compressa in southwest region of China. Anhui Agric. Sci. Bull. 12: 46-47.
18. McCue K. A., Buckler E. S. and Holtsford T. P., (1996). A hierarchical view of genetic structure in the rare annual plant Clarkia springvillensis. Conserv. Biol. 10: 1425-1434.
19. Nei M., (1972). Genetic distance between populations. Am. Nat. 106: 282-292.
20. Nei M., (1973). Analysis of gene diversity in subdivided populations. Proc. Natl Acad. Sci. USA 70: 3321-3323.
21. Petros Y., Merker A. and Zeleke H., (2007). Analysis of genetic diversity of Guizotia abyssinica from Ethiopia using inter simple sequence repeat markers. Hereditas 144: 18-24.
22. Rohlf F. J., (1997). NTSYS-pc, numerical taxonomy and multivariate analysis system, ver. 1.8, Applied Biostatistics Inc., New York, NY, USA.
23. Slatkin M. and Barton N. H., (1989). A comparison of three indirect methods for estimating average levels of gene flow. Evolution 43: 1349-1368.
24. Smouse P. E., Long J. C. and Sokal R. R., (1986). Multiple regression and correlation extensions of the Mantel test of matrix correspondence. Syst. Zool. 35: 627-632.
25. Wallace L. E., (2002). Examining the effects of fragmentation on genetic variation in Platanthera leucophaea (Orchidaceae): Inferences from allozyme and random amplified polymorphic DNA markers. Plant Species Biol. 17: 37-49.
26. Wang C. N., Moller M. and Cronk Q. C. B., (2004). Population genetic structure of Titanotrichum oldhamii (Gesneriaceae), a subtropical bulbiliferousplant with mixed sexual and asexual reproduction. Ann. Bot. 93: 201-209.
27. Widén B., Cronberg N. and Widén M., (1994). Genotypic diversity molecular markers and spatial distribution of genets in clonal plants, a literature survey. Folia Geobot. Phytotax. 29: 245-263.
28. Wu Y.-Q. and Du Y., (1992). Research of limpograsses (Hemarhria R. BR.) as forage. J. Sichuan Agric. Univ. 10: 260-265.
29. Wu Y.-Q. and Du Y., (2000). Some reproductive characteristics of Hemarhria compressa. J. Sichuan Agric. Univ. 18: 262-264.
30. Xia L.-Q., Li J.-Q. and Li W., (2002). Genetic diversity of clonal plants. Chin. Bull. Bot. 19: 425-431.
31. Xie G.-W., Wang D.-L., Yuan Y.-M. et al., (2005). Population genetic structure of Monimopetalum chinese (Celastraceae), an endangered endemic species of eastern China. Ann. Bot. 95: 773-777.
32. Yang C.-H., Zhang X.-Q. and Li X.-L., (2004). Hemarhria germplasm resources and breeding. Acta Pratculturae Sin. 13: 7-12.
33. Yang C.-H. and Zhang X.-Q., (2006). Hemarhria compressa: Growth behavior and multipurpose. Acta Pratculturae Sin. 15: 246-248.
34. Yang Y.-F., Li J. and Zheng H., (1997). Vegetative propagation of clonal population of Hemarhria on Songnen Plain of China. Acta Pratculturae Sin. 6: 36-40.
35. Yeh F. C., Yang R. C. and Boyle T., (1999). POPGENE ver. 1.32. Microsoft Windows-based freeware for population genetic analysis Quick user guide. Center Int. For. Res, Univ. of Alberta.
36. Zhang F. M., (2001). DCFA1.1, a program companied with AMOVA to compute the matrix of distance. Lab. of Syst. and Evol. Bot., Inst. of Botany, Chin. Acad. Sci Beijing. (DCFA).
37. Zietldewicz E., Rafalski A. and Labuda D., (1994). Genome fingerprinting by simple sequence repeat (SSR)-anchored polymemse chain reaction amplification. Genomics 20: 176-183.