PCR method for detection and identification of Lactobacillus casei/paracasei bacteriophages in dairy products

International Journal of Food Microbiology

Volumn 124, Issue 2, 2008, Pages 147-153

  Binetti, Ana G ^a   Capra, M Luján ^a   Álvarez, Miguel A ^b   Reinheimer, Jorge A ^a  

^a UNIVERSIDAD NACIONAL DEL LITORAL   (Argentina)

^b DEPARTMENT OF MICROBIOLOGY AND BIOCHEMISTRY OF DAIRY PRODUCTS   (Spain)

Author keywords

Bacteriophages; Lactobacillus casei paracasei; PCR detection; Probiotic lactic acid bacteria

Indexed keywords

ARTICLE; BACTERIUM CONTAMINATION; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; DAIRY PRODUCT; FERMENTATION; LACTOBACILLUS CASEI; LACTOBACILLUS PARACASEI; MILK; NONHUMAN; POLYMERASE CHAIN REACTION;

ANIMALS; BACTERIOPHAGES; CATTLE; COLONY COUNT, MICROBIAL; CONSUMER PRODUCT SAFETY; DAIRY PRODUCTS; DNA, BACTERIAL; FOOD CONTAMINATION; HUMANS; LACTOBACILLUS CASEI; MILK; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; PROBIOTICS; RISK ASSESSMENT; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT;

BACTERIA (MICROORGANISMS); LACTOBACILLUS; LACTOBACILLUS CASEI;

EID: 43549088730     PISSN: 01681605     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2008.03.006     Document Type: Article

References (35)

1. Álvarez M.A., Rodríguez A., and Suárez J.E. Stable expression of the Lactobacillus casei bacteriophage A2 repressor blocks phage propagation during milk fermentation. Journal of Applied Microbiology 86 (1999) 812-816
2. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSIBLAST: a new generation of protein database search programs. Nucleic Acids Research 25 (1997) 3389-3402
3. Binetti A.G., del Río B., Martin M.C., and Álvarez M.A. Detection and characterization of Streptococcus thermophilus bacteriophages based on the antireceptor gene sequence. Applied and Environmental Microbiology 71 (2005) 6096-6103
4. Binetti A.G., and Reinheimer J.A. Thermal and chemical inactivation of indigenous Streptococcus thermophilus bacteriophages isolated from Argentinian dairy plants. Journal of Food Protection 63 (2000) 509-515
5. Brüssow H., Fremont M., Bruttin S., Sidoti A., Constable A.J., and Fryder V. Detection and classification of Streptococcus thermophilus bacteriophages isolated from industrial milk fermentation. Applied and Environmental Microbiology 60 (1994) 4537-4543
6. Capra, M.L. 2007. D. thesis. Universidad Nacional del Litoral, Facultad de Ciencias Biológicas. Santa Fe, Argentina. "Bacteriofagos de Lactobacillus casei/paracasei. Caracterización y estudio de la fago resistencia".
7. Capra M.L., Quiberoni A., Ackermann H.-W., Moineau S., and Reinheimer J.A. Characterization of a new virulent phage (MLC-A) of Lactobacillus paracasei. Journal of Dairy Science. 89 (2006) 2414-2423
8. Capra M.L., Quiberoni A., and Reinheimer J.A. Thermal and chemical resistance of Lactobacillus casei and Lactobacillus paracasei bacteriophages. Letters in Applied Microbiology 38 6 (2004) 499-504
9. Coveney H.M., Fitzgerald G.F., and Daly C. A study of the microbiological status of Irish farmhouse cheeses with emphasis on selected pathogenic and spoilage microorganisms. Journal of Applied Bacteriology 77 (1994) 621-630
10. del Río B., Binetti A.G., Martín M.C., Fernández M.H., Magadán A., and Álvarez M.A. Multiplex PCR for the detection and identification of dairy bacteriophages in milk. Food Microbiology 24 (2007) 75-81
11. Dupont K., Vogensen F.K., and Josephsen J. Detection of lactococcal 936-species bacteriophages in whey by magnetic capture hybridization PCR targeting a variable region of receptor-binding protein genes. Journal of Applied Microbiology 98 (2005) 1001-1009
12. Foley S., Lucchini S., Zwahlen M.C., and Brüssow H. A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus. Virology 250 (1998) 377-387
13. Herrero M., de los Reyes-Gavilán C., Caso J.L., and Suárez J.E. Characterization of f393-A2, a bacteriophage that infects Lactobacillus casei. Microbiology 140 (1994) 2585-2590
14. Hino M., and Ikebe N. Studies on the lactic acid bacteria employed for beverage production II. Isolation and some properties of a bacteriophage infected during the fermentation of lactic acid beverage. Journal of the Agricultural Chemical Society of Japan 39 (1965) 472-476
15. Josephsen J., and Neve H. In: Salminen S., and von Wright A. (Eds). Lactic Acid Bacteria (1998), Marcel Dekker Inc., New York 385-436
16. Labrie S., and Moineau S. Multiplex PCR for detection and identification of lactococcal bacteriophages. Applied and Environmental Microbiology 66 (2000) 987-994
17. Lee, Y.K., Nomoto, K., Salminen, S., Gorbach, S.L. 1999. In: Wiley, J. & Sons (Eds.), Handbook of Probiotics. Wiley-Interscience, New York, pp. 1-22.
18. Lillehaug D. An improved plaque assay for poor plaque-producing temperate lactococcal bacteriophages. Journal of Applied Microbiology 83 (1997) 85-90
19. Lo T.C., Shih T.C., Lin C.F., Chen H.W., and Lin T.H. Complete genomic sequence of the temperate bacteriophage AT3 isolated from Lactobacillus casei ATCC 393. Virology 339 (2005) 42-55
20. Moineau S. Applications of phage resistance in lactic acid bacteria. Antonie van Leeuwenhoek Reviews 76 (1999) 77-382
21. Moineau S., and Lévesque C. In: Kutter E., and Sulakvelidze A. (Eds). Bacteriophages Biology and Applications (2005), CRC Press, Boca Raton, Florida 285-296
22. Nakashima Y., Hasuwa H., Kakita Y., Murata K., Kuroiwa A., Miake F., and Watanabe K. A temperate phage with cohesive ends induced by mitomycin C treatment of Lactobacillus casei. Archives of Virology 143 (1998) 1621-1626
23. Neve H., Berger A., and Heller K.J. A method for detecting and enumerating airborne virulent bacteriophage of dairy starter cultures. Kieler Milchwirtschaftliche Forschungsberichte 47 (1995) 193-207
24. Neviani E.N., Carminati D., and Giraffa G. Selection of some bacteriophage- and lysozyme-resistant variants of Lactobacillus helveticus CNRZ 892. Journal of Dairy Science 75 (1992) 905-913
25. Sambrook J., and Russell D.W. Molecular Cloning: a Laboratory Manual. third ed. (2001), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
26. Séchaud L., Cluzel P.J., Rousseau M., Baumgartner A., and Accolas J.P. Bacteriophages of lactobacilli. Biochimie 70 (1988) 401-410
27. Shimizu-Kadota M., and Tsuchida N. Physical mapping of the virion and the prophage DNAs of a temperate Lactobacillus phage FSW. Journal of General Microbiology 130 (1984) 423-430
28. Suárez V.B., Quiberoni A., Binetti A.G., and Reinheimer J.A. Thermophilic lactic acid bacteria phages isolated from Argentinian dairy industries. Journal of Food Protection 65 (2002) 1597-1604
29. Svensson V., and Christiansson A. Methods for phage monitoring. FIL-IDF Bulletin 263 (1991) 29-39
30. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22 (1994) 4673-4680
31. Tuohimaa A., Riipinen K.-A., Brandt K., and Alatossava T. The genome of the virulent phage Lc-Nu of probiotic Lactobacillus rhamnosus, and comparative genomics with Lactobacillus casei phages. Archives of Virology 151 5 (2006) 947-965
32. Tynnkynen S., Satokary R., Saarela M., Mattila-Sandholm T., and Saxelin M. Comparison of ribotyping, randomly amplified polymorphic DNA analysis, and pulsed-field gel electrophoresis in typing of Lactobacillus rhamnosus and L. casei strains. Applied and Environmental Microbiology 65 (1999) 3908-3914
33. Vinderola C.G., Prosello W., Ghiberto D., and Reinheimer J.A. Viability of probiotic (Bifidobacterium, Lactobacillus acidophilus and Lactobacillus casei) and nonprobiotic microflora in Argentinian Fresco cheese. Journal of Dairy Science 83 (2000) 1905-1911
34. Watanabe K., Takesue S., Jin-Nai K., and Yoshikawa T. Bacteriophage active against the lactic acid beverage-producing bacterium Lactobacillus casei. Applied Microbiology 20 (1970) 409-415
35. Zago M., De Lorentiis A., Carminati D., Comaschi L., and Giraffa G. Detection and identification of Lactobacillus delbrueckii subsp. lactis bacteriophages by PCR. Journal of Dairy Research 73 (2006) 1-8