Predicting σ28 promoters in eleven Shewanella genomes

FEMS Microbiology Letters

Volumn 283, Issue 2, 2008, Pages 223-230

  Song, Wenjie ^a   Juhn, Frank S ^b   Naiman, Daniel Q ^c   Konstantinidis, Konstantinos T ^d   Gardner, Timothy S ^b   Ward, Mandy J ^a  

^a The Johns Hopkins University   (United States)

^b Boston University   (United States)

^c Johns Hopkins University   (United States)

^d Georgia Institute of Technology   (United States)

Author keywords

28; Promoter prediction; Shewanella

Indexed keywords

SIGMA FACTOR; SIGMA FACTOR 28; BACTERIAL PROTEIN; FLIA PROTEIN, BACTERIA;

ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; CHEMOTAXIS; CONTROLLED STUDY; FALSE POSITIVE RESULT; GENE IDENTIFICATION; GENE LOCUS; GENETIC CORRELATION; GENETIC TRANSCRIPTION; GENOME SIZE; NONHUMAN; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; SHEWANELLA; SHEWANELLA AMAZONENSIS; SHEWANELLA BALTICA; SHEWANELLA DENITRIFICANS; SHEWANELLA FRIGIDIMARINA; SHEWANELLA LOIHICA; SHEWANELLA ONEIDENSIS; SHEWANELLA PUTREFACIENS; ALGORITHM; BINDING SITE; BIOLOGY; GENETICS; METABOLISM;

SHEWANELLA; SHEWANELLA ONEIDENSIS MR-1;

ALGORITHMS; BACTERIAL PROTEINS; BINDING SITES; COMPUTATIONAL BIOLOGY; GENOME, BACTERIAL; PROMOTER REGIONS (GENETICS); SHEWANELLA; SIGMA FACTOR;

EID: 43549084552     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2008.01175.x     Document Type: Article

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