-
1
-
-
3543068251
-
Regulog analysis detection of conserved regulatory networks across bacteria: Application to Staphylococcus aureus
-
Alkema WBL, Lenhard B Wasserman WW (2007) Regulog analysis detection of conserved regulatory networks across bacteria: application to Staphylococcus aureus. Genome Res 14 : 1362 1373.
-
(2007)
Genome Res
, vol.14
, pp. 1362-1373
-
-
Alkema, W.B.L.1
Lenhard, B.2
Wasserman, W.W.3
-
2
-
-
0025278259
-
Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences
-
Bucher P (1990) Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. J Mol Biol 212 : 563 578.
-
(1990)
J Mol Biol
, vol.212
, pp. 563-578
-
-
Bucher, P.1
-
3
-
-
0034444676
-
Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli
-
Chilcott GS Hughes KT (2000) Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli. Microbiol Mol Biol Rev 64 : 694 708.
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 694-708
-
-
Chilcott, G.S.1
Hughes, K.T.2
-
4
-
-
0028904426
-
Promoter architecture in the flagellar regulon of Bacillus subtilis: High-level expression of flagellin by the σd RNA polymerase requires an upstream promoter element
-
Fredrick K, Caramori T, Chen Y-F, Galizzi A Helmann JD (1994) Promoter architecture in the flagellar regulon of Bacillus subtilis: high-level expression of flagellin by the σD RNA polymerase requires an upstream promoter element. Proc Natl Acad Sci USA 92 : 2582 2586.
-
(1994)
Proc Natl Acad Sci USA
, vol.92
, pp. 2582-2586
-
-
Fredrick, K.1
Caramori, T.2
Chen, Y.-F.3
Galizzi, A.4
Helmann, J.D.5
-
6
-
-
0023409126
-
DNA sequence analysis suggests that expression of flagellar and chemotaxis genes in Escherichia coli and Salmonella typhimurium is controlled by an alternative σ factor
-
Helmann JD Chamberlin MJ (1987) DNA sequence analysis suggests that expression of flagellar and chemotaxis genes in Escherichia coli and Salmonella typhimurium is controlled by an alternative σ factor. Proc Natl Acad Sci USA 84 : 6422 6424.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 6422-6424
-
-
Helmann, J.D.1
Chamberlin, M.J.2
-
7
-
-
0032826179
-
Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
-
Hertz GZ Stormo GD (1999) Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics 15 : 563 577.
-
(1999)
Bioinformatics
, vol.15
, pp. 563-577
-
-
Hertz, G.Z.1
Stormo, G.D.2
-
8
-
-
0027965333
-
Sequence analysis of the Vibrio cholerae acfD gene reveals the presence of an overlapping reading frame, orfZ, which encodes a protein that shares sequence similarity to the FliA and FliC products of Salmonella
-
Hughes KJ, Everiss KD, Kovach ME Peterson KM (1994) Sequence analysis of the Vibrio cholerae acfD gene reveals the presence of an overlapping reading frame, orfZ, which encodes a protein that shares sequence similarity to the FliA and FliC products of Salmonella. Gene 146 : 79 82.
-
(1994)
Gene
, vol.146
, pp. 79-82
-
-
Hughes, K.J.1
Everiss, K.D.2
Kovach, M.E.3
Peterson, K.M.4
-
9
-
-
0033149857
-
Reevaluation of the promoter structure of the class 3 flagellar operons of Escherichia coli and Salmonella
-
Ide N, Ikebe T Kutsukake K (1999) Reevaluation of the promoter structure of the class 3 flagellar operons of Escherichia coli and Salmonella. Genes Genet Syst 74 : 113 116.
-
(1999)
Genes Genet Syst
, vol.74
, pp. 113-116
-
-
Ide, N.1
Ikebe, T.2
Kutsukake, K.3
-
10
-
-
0031951605
-
Differential regulation of multiple flagellins in Vibrio cholerae
-
Klose KE Mekalanos JJ (1998) Differential regulation of multiple flagellins in Vibrio cholerae. J Bacteriol 180 : 303 316.
-
(1998)
J Bacteriol
, vol.180
, pp. 303-316
-
-
Klose, K.E.1
Mekalanos, J.J.2
-
11
-
-
0022880325
-
Nucleotide sequence of the hag gene encoding flagellin of Escherichia coli
-
Kuwajima G, Asaka J-I, Fujiwara T, Fujiwara T, Node K Kondo E (1986) Nucleotide sequence of the hag gene encoding flagellin of Escherichia coli. J Bacteriol 168 : 1479 1483.
-
(1986)
J Bacteriol
, vol.168
, pp. 1479-1483
-
-
Kuwajima, G.1
Asaka, J.-I.2
Fujiwara, T.3
Fujiwara, T.4
Node, K.5
Kondo, E.6
-
12
-
-
0042170415
-
Flagellin gene fliC of Xanthomonas campestris is upregulated by transcription factor Clp
-
Lee M-C, Weng S-F Tseng Y-H (2003) Flagellin gene fliC of Xanthomonas campestris is upregulated by transcription factor Clp. Biochem Biophys Res Com 307 : 647 652.
-
(2003)
Biochem Biophys Res Com
, vol.307
, pp. 647-652
-
-
Lee, M.-C.1
Weng, S.-F.2
Tseng, Y.-H.3
-
13
-
-
0344237358
-
Computational identification of the SpoOA-phosphate regulon that is essential for the cellular differentiation and development in Gram-positive spore-forming bacteria
-
Liu J, Tan K Stormo GD (2003) Computational identification of the SpoOA-phosphate regulon that is essential for the cellular differentiation and development in Gram-positive spore-forming bacteria. Nucleic Acids Res 31 : 6891 6903.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6891-6903
-
-
Liu, J.1
Tan, K.2
Stormo, G.D.3
-
14
-
-
4844225256
-
Transcription of Proteus mirabilis flaAB
-
Manos J Belas R (2004) Transcription of Proteus mirabilis flaAB. Microbiology 150 : 2857 2863.
-
(2004)
Microbiology
, vol.150
, pp. 2857-2863
-
-
Manos, J.1
Belas, R.2
-
15
-
-
0034828107
-
Polar flagellar motility of the Vibrionaceae
-
McCarter LL (2001) Polar flagellar motility of the Vibrionaceae. Microbiol Mol Biol Rev 65 : 445 462.
-
(2001)
Microbiol Mol Biol Rev
, vol.65
, pp. 445-462
-
-
McCarter, L.L.1
-
16
-
-
0035928603
-
Novel σf-dependent genes of Escherichia coli found using a specified promoter consensus
-
Park K, Choi S, Ko M Park C (2001) Novel σF-dependent genes of Escherichia coli found using a specified promoter consensus. FEMS Microbiol Lett 202 : 243 250.
-
(2001)
FEMS Microbiol Lett
, vol.202
, pp. 243-250
-
-
Park, K.1
Choi, S.2
Ko, M.3
Park, C.4
-
17
-
-
0034744733
-
The novel σ54- and σ28-dependent flagellar gene transcription hierarchy of Vibrio cholerae
-
Prouty MG, Correa NE Klose KE (2001) The novel σ54- and σ28-dependent flagellar gene transcription hierarchy of Vibrio cholerae. Mol Microbiol 39 : 1595 1609.
-
(2001)
Mol Microbiol
, vol.39
, pp. 1595-1609
-
-
Prouty, M.G.1
Correa, N.E.2
Klose, K.E.3
-
18
-
-
20644446065
-
Identification of a bacterial regulatory system for ribonucleotide reductases by phylogenetic profiling
-
Rodionov DA Gelfand MS (2005) Identification of a bacterial regulatory system for ribonucleotide reductases by phylogenetic profiling. Trends Genet 21 : 385 389.
-
(2005)
Trends Genet
, vol.21
, pp. 385-389
-
-
Rodionov, D.A.1
Gelfand, M.S.2
-
19
-
-
0034072450
-
DNA binding sites: Representation and discovery
-
Stormo GD (2000) DNA binding sites: representation and discovery. Bioinformatics 16 : 16 23.
-
(2000)
Bioinformatics
, vol.16
, pp. 16-23
-
-
Stormo, G.D.1
-
20
-
-
0034307951
-
The alternative sigma factor σ28 of the extreme thermophile Aquifex aeolicus restores motility to an Escherichia coli fliA mutant
-
Studholme DJ Buck M (2000) The alternative sigma factor σ28 of the extreme thermophile Aquifex aeolicus restores motility to an Escherichia coli fliA mutant. FEMS Microbiol Lett 191 : 103 107.
-
(2000)
FEMS Microbiol Lett
, vol.191
, pp. 103-107
-
-
Studholme, D.J.1
Buck, M.2
-
21
-
-
0142030043
-
Sigma 28 RNA polymerase regulates hctB, a late developmental gene in Clamydia
-
Yu HH Tan M (2003) Sigma 28 RNA polymerase regulates hctB, a late developmental gene in Clamydia. Mol Microbiol 50 : 577 584.
-
(2003)
Mol Microbiol
, vol.50
, pp. 577-584
-
-
Yu, H.H.1
Tan, M.2
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