-
2
-
-
0030915446
-
Kinetic analysis of pairing and strand exchange catalyzed by RecA-detection by fluorescence energy transfer
-
Bazemore L.R., Takahashi M., and Radding C.M. Kinetic analysis of pairing and strand exchange catalyzed by RecA-detection by fluorescence energy transfer. J. Biol. Chem. 272 (1997) 14672-14682
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 14672-14682
-
-
Bazemore, L.R.1
Takahashi, M.2
Radding, C.M.3
-
3
-
-
0029911725
-
Evidence for the coupling of ATP hydrolysis to the final (extension) phase of RecA protein-mediated DNA strand exchange
-
Bedale W.A., and Cox M.M. Evidence for the coupling of ATP hydrolysis to the final (extension) phase of RecA protein-mediated DNA strand exchange. J. Biol. Chem. 271 (1996) 5725-5732
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 5725-5732
-
-
Bedale, W.A.1
Cox, M.M.2
-
4
-
-
0032865485
-
A molecular model for RecA-promoted strand exchange via parallel triple-stranded helices
-
Bertucat G., Lavery R., and Prevost C. A molecular model for RecA-promoted strand exchange via parallel triple-stranded helices. Biophys. J. 77 (1999) 1562-1576
-
(1999)
Biophys. J.
, vol.77
, pp. 1562-1576
-
-
Bertucat, G.1
Lavery, R.2
Prevost, C.3
-
5
-
-
0020841303
-
Synapsis and the formation of paranemic joints by Escherichia coli RecA-protein
-
Bianchi M., Dasgupta C., and Radding C.M. Synapsis and the formation of paranemic joints by Escherichia coli RecA-protein. Cell 34 (1983) 931-939
-
(1983)
Cell
, vol.34
, pp. 931-939
-
-
Bianchi, M.1
Dasgupta, C.2
Radding, C.M.3
-
6
-
-
0035869215
-
Topological testing of the mechanism of homology search promoted by RecA protein
-
Cai L.P., Marquardt U., Zhang Z.Q., Taisey M.J., and Chen J.H. Topological testing of the mechanism of homology search promoted by RecA protein. Nucleic Acids Res. 29 (2001) 1389-1398
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1389-1398
-
-
Cai, L.P.1
Marquardt, U.2
Zhang, Z.Q.3
Taisey, M.J.4
Chen, J.H.5
-
7
-
-
0019853508
-
Directionality and polarity in RecA protein-promoted branch migration
-
Cox M.M., and Lehman I.R. Directionality and polarity in RecA protein-promoted branch migration. Proc. Natl. Acad. Sci. USA 78 (1981) 6018-6022
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 6018-6022
-
-
Cox, M.M.1
Lehman, I.R.2
-
8
-
-
0020064406
-
Lower fidelity of RecA protein catalyzed homologous pairing with a superhelical substrate
-
Dasgupta C., and Radding C.M. Lower fidelity of RecA protein catalyzed homologous pairing with a superhelical substrate. Nature 295 (1982) 71-73
-
(1982)
Nature
, vol.295
, pp. 71-73
-
-
Dasgupta, C.1
Radding, C.M.2
-
9
-
-
0019120576
-
The topology of homologous pairing promoted by RecA protein
-
Dasgupta C., Shibata T., Cunningham R.P., and Radding C.M. The topology of homologous pairing promoted by RecA protein. Cell 22 (1980) 437-446
-
(1980)
Cell
, vol.22
, pp. 437-446
-
-
Dasgupta, C.1
Shibata, T.2
Cunningham, R.P.3
Radding, C.M.4
-
10
-
-
0030743648
-
Dissociation of non-complementary second DNA from RecA filament without ATP hydrolysis: mechanism of search for homologous DNA
-
Ellouze C., Norden B., and Takahashi M. Dissociation of non-complementary second DNA from RecA filament without ATP hydrolysis: mechanism of search for homologous DNA. J. Biochem. (Tokyo) 121 (1997) 1070-1075
-
(1997)
J. Biochem. (Tokyo)
, vol.121
, pp. 1070-1075
-
-
Ellouze, C.1
Norden, B.2
Takahashi, M.3
-
11
-
-
4644225318
-
Exchange of DNA base pairs that coincides with recognition of homology promoted by E. coli RecA protein
-
Folta-Stogniew E., O'Malley S., Gupta R., Anderson K.S., and Radding C.M. Exchange of DNA base pairs that coincides with recognition of homology promoted by E. coli RecA protein. Mol. Cell 15 (2004) 965-975
-
(2004)
Mol. Cell
, vol.15
, pp. 965-975
-
-
Folta-Stogniew, E.1
O'Malley, S.2
Gupta, R.3
Anderson, K.S.4
Radding, C.M.5
-
13
-
-
33748945703
-
Mechanism of RecA-mediated homologous recombination revisited by single molecule nanomanipulation
-
Fulconis R., Mine J., Bancaud A., Dutreix M., and Viovy J.L. Mechanism of RecA-mediated homologous recombination revisited by single molecule nanomanipulation. EMBO J. 25 (2006) 4293-4304
-
(2006)
EMBO J.
, vol.25
, pp. 4293-4304
-
-
Fulconis, R.1
Mine, J.2
Bancaud, A.3
Dutreix, M.4
Viovy, J.L.5
-
14
-
-
33750296934
-
Direct observation of individual RecA filaments assembling on single DNA molecules
-
Galletto R., Amitani I., Baskin R.J., and Kowalczykowski S.C. Direct observation of individual RecA filaments assembling on single DNA molecules. Nature 443 (2006) 875-878
-
(2006)
Nature
, vol.443
, pp. 875-878
-
-
Galletto, R.1
Amitani, I.2
Baskin, R.J.3
Kowalczykowski, S.C.4
-
15
-
-
0032544186
-
Three mechanistic steps detected by FRET after presynaptic filament formation in homologous recombination. ATP hydrolysis required for release of oligonucleotide heteroduplex product from RecA
-
Gumbs O.H., and Shaner S.L. Three mechanistic steps detected by FRET after presynaptic filament formation in homologous recombination. ATP hydrolysis required for release of oligonucleotide heteroduplex product from RecA. Biochemistry 37 (1998) 11692-11706
-
(1998)
Biochemistry
, vol.37
, pp. 11692-11706
-
-
Gumbs, O.H.1
Shaner, S.L.2
-
16
-
-
0028131478
-
On the role of ATP hydrolysis in RecA protein-mediated DNA strand exchange. 3. Unidirectional branch migration and extensive hybrid DNA formation
-
Jain S.K., Cox M.M., and Inman R.B. On the role of ATP hydrolysis in RecA protein-mediated DNA strand exchange. 3. Unidirectional branch migration and extensive hybrid DNA formation. J. Biol. Chem. 269 (1994) 20653-20661
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 20653-20661
-
-
Jain, S.K.1
Cox, M.M.2
Inman, R.B.3
-
17
-
-
33746713745
-
Real-time observation of RecA filament dynamics with single monomer resolution
-
Joo C., McKinney S.A., Nakamura M., Rasnik I., Myong S., and Ha T. Real-time observation of RecA filament dynamics with single monomer resolution. Cell 126 (2006) 515-527
-
(2006)
Cell
, vol.126
, pp. 515-527
-
-
Joo, C.1
McKinney, S.A.2
Nakamura, M.3
Rasnik, I.4
Myong, S.5
Ha, T.6
-
18
-
-
0021272696
-
Separation of the presynaptic and synaptic phases of homologous pairing promoted by RecA protein
-
Kahn R., and Radding C.M. Separation of the presynaptic and synaptic phases of homologous pairing promoted by RecA protein. J. Biol. Chem. 259 (1984) 7495-7503
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 7495-7503
-
-
Kahn, R.1
Radding, C.M.2
-
20
-
-
0030748859
-
Helical repeat of DNA in the region of homologous pairing
-
Kiianitsa K., and Stasiak A. Helical repeat of DNA in the region of homologous pairing. Proc. Natl. Acad. Sci. USA 94 (1997) 7837-7840
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7837-7840
-
-
Kiianitsa, K.1
Stasiak, A.2
-
21
-
-
0025891414
-
Biochemistry of genetic-recombination: energetics and mechanism of DNA strand exchange
-
Kowalczykowski S.C. Biochemistry of genetic-recombination: energetics and mechanism of DNA strand exchange. Annu. Rev. Biophys. Biophys. Chem. 20 (1991) 539-575
-
(1991)
Annu. Rev. Biophys. Biophys. Chem.
, vol.20
, pp. 539-575
-
-
Kowalczykowski, S.C.1
-
22
-
-
0034161571
-
Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing
-
Mazin A.V., Zaitseva E., Sung P., and Kowalczykowski S.C. Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing. EMBO J. 19 (2000) 1148-1156
-
(2000)
EMBO J.
, vol.19
, pp. 1148-1156
-
-
Mazin, A.V.1
Zaitseva, E.2
Sung, P.3
Kowalczykowski, S.C.4
-
23
-
-
0003435105
-
RecA protein-catalyzed strand assimilation-stimulation by Escherichia-coli single-stranded DNA-binding protein
-
McEntee K., Weinstock G.M., and Lehman I.R. RecA protein-catalyzed strand assimilation-stimulation by Escherichia-coli single-stranded DNA-binding protein. Proc. Natl. Acad. Sci. USA 77 (1980) 857-861
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 857-861
-
-
McEntee, K.1
Weinstock, G.M.2
Lehman, I.R.3
-
24
-
-
0019835729
-
Binding of the RecA protein of Escherichia-coli to single-stranded and double-stranded DNA
-
McEntee K., Weinstock G.M., and Lehman I.R. Binding of the RecA protein of Escherichia-coli to single-stranded and double-stranded DNA. J. Biol. Chem. 256 (1981) 8835-8844
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 8835-8844
-
-
McEntee, K.1
Weinstock, G.M.2
Lehman, I.R.3
-
25
-
-
0025166577
-
Stable DNA heteroduplex formation catalyzed by the Escherichia-coli RecA protein in the absence of ATP hydrolysis
-
Menetski J.P., Bear D.G., and Kowalczykowski S.C. Stable DNA heteroduplex formation catalyzed by the Escherichia-coli RecA protein in the absence of ATP hydrolysis. Proc. Natl. Acad. Sci. USA 87 (1990) 21-25
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 21-25
-
-
Menetski, J.P.1
Bear, D.G.2
Kowalczykowski, S.C.3
-
26
-
-
0021215606
-
Mechanism of the concerted action of RecA protein and helix-destabilizing proteins in homologous recombination
-
Muniyappa K., Shaner S.L., Tsang S.S., and Radding C.M. Mechanism of the concerted action of RecA protein and helix-destabilizing proteins in homologous recombination. Proc. Natl. Acad. Sci. USA 81 (1984) 2757-2761
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 2757-2761
-
-
Muniyappa, K.1
Shaner, S.L.2
Tsang, S.S.3
Radding, C.M.4
-
28
-
-
0004136246
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual. Second Edition (1989), Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual. Second Edition
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
31
-
-
0030024985
-
Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules
-
Smith S.B., Cui Y.J., and Bustamante C. Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules. Science 271 (1996) 795-799
-
(1996)
Science
, vol.271
, pp. 795-799
-
-
Smith, S.B.1
Cui, Y.J.2
Bustamante, C.3
-
32
-
-
0020478259
-
The helicity of DNA in complexes with RecA protein
-
Stasiak A., and Dicapua E. The helicity of DNA in complexes with RecA protein. Nature 299 (1982) 185-186
-
(1982)
Nature
, vol.299
, pp. 185-186
-
-
Stasiak, A.1
Dicapua, E.2
-
34
-
-
17544379313
-
Torque-limited RecA polymerization on dsDNA
-
van der Heijden T., van Noort J., van Leest H., Kanaar R., Wyman C., Dekker N., and Dekker C. Torque-limited RecA polymerization on dsDNA. Nucleic Acids Res. 33 (2005) 2099-2105
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 2099-2105
-
-
van der Heijden, T.1
van Noort, J.2
van Leest, H.3
Kanaar, R.4
Wyman, C.5
Dekker, N.6
Dekker, C.7
-
35
-
-
2342454974
-
Dual architectural roles of HU: formation of flexible hinges and rigid filaments
-
van Noort J., Verbrugge S., Goosen N., Dekker C., and Dame R.T. Dual architectural roles of HU: formation of flexible hinges and rigid filaments. Proc. Natl. Acad. Sci. USA 101 (2004) 6969-6974
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 6969-6974
-
-
van Noort, J.1
Verbrugge, S.2
Goosen, N.3
Dekker, C.4
Dame, R.T.5
-
36
-
-
0031137908
-
The duplex DNA is very underwound in the three-stranded RecA protein-mediated synaptic complex
-
Voloshin O.N., and Camerini-Otero R.D. The duplex DNA is very underwound in the three-stranded RecA protein-mediated synaptic complex. Genes Cells 2 (1997) 303-314
-
(1997)
Genes Cells
, vol.2
, pp. 303-314
-
-
Voloshin, O.N.1
Camerini-Otero, R.D.2
-
37
-
-
0344734266
-
ATP-dependent renaturation of DNA catalyzed by the RecA protein of Escherichia-coli
-
Weinstock G.M., Mcentee K., and Lehman I.R. ATP-dependent renaturation of DNA catalyzed by the RecA protein of Escherichia-coli. Proc. Natl. Acad. Sci. USA 76 (1979) 126-130
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 126-130
-
-
Weinstock, G.M.1
Mcentee, K.2
Lehman, I.R.3
-
38
-
-
0019771908
-
Heteroduplex formation by RecA protein-polarity of strand exchanges
-
West S.C., Cassuto E., and Howard-Flanders P. Heteroduplex formation by RecA protein-polarity of strand exchanges. Proc. Natl. Acad. Sci. USA 78 (1981) 6149-6153
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 6149-6153
-
-
West, S.C.1
Cassuto, E.2
Howard-Flanders, P.3
-
39
-
-
0032524286
-
The role of negative superhelicity and length of homology in the formation of paranemic joints promoted by RecA protein
-
Wong B.C., Chiu S.K., and Chow S.A. The role of negative superhelicity and length of homology in the formation of paranemic joints promoted by RecA protein. J. Biol. Chem. 273 (1998) 12120-12127
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 12120-12127
-
-
Wong, B.C.1
Chiu, S.K.2
Chow, S.A.3
-
40
-
-
4143079350
-
Homologous recombination: down to the wire
-
Wyman C., and Kanaar R. Homologous recombination: down to the wire. Curr. Biol. 14 (2004) R629-R631
-
(2004)
Curr. Biol.
, vol.14
-
-
Wyman, C.1
Kanaar, R.2
-
41
-
-
0036310983
-
Elucidating a key intermediate in homologous DNA strand exchange: structural characterization of the RecA-triple-stranded DNA complex using fluorescence resonance energy transfer
-
Xiao J., and Singleton S.F. Elucidating a key intermediate in homologous DNA strand exchange: structural characterization of the RecA-triple-stranded DNA complex using fluorescence resonance energy transfer. J. Mol. Biol. 320 (2002) 529-558
-
(2002)
J. Mol. Biol.
, vol.320
, pp. 529-558
-
-
Xiao, J.1
Singleton, S.F.2
-
42
-
-
0035902614
-
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA
-
Yu X., Jacobs S.A., West S.C., Ogawa T., and Egelman E.H. Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA. Proc. Natl. Acad. Sci. USA 98 (2001) 8419-8424
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 8419-8424
-
-
Yu, X.1
Jacobs, S.A.2
West, S.C.3
Ogawa, T.4
Egelman, E.H.5
-
43
-
-
1642319679
-
What is the structure of the RecA-DNA filament?
-
Yu X., VanLoock M.S., Yang S., Reese J.T., and Egelman E.H. What is the structure of the RecA-DNA filament?. Curr. Protein Pept. Sci. 5 (2004) 73-79
-
(2004)
Curr. Protein Pept. Sci.
, vol.5
, pp. 73-79
-
-
Yu, X.1
VanLoock, M.S.2
Yang, S.3
Reese, J.T.4
Egelman, E.H.5
-
44
-
-
0030891288
-
DNA strand exchange mediated by the Escherichia coli RecA protein initiates in the minor groove of double-stranded DNA
-
Zhou X.H., and Adzuma K. DNA strand exchange mediated by the Escherichia coli RecA protein initiates in the minor groove of double-stranded DNA. Biochemistry 36 (1997) 4650-4661
-
(1997)
Biochemistry
, vol.36
, pp. 4650-4661
-
-
Zhou, X.H.1
Adzuma, K.2
-
45
-
-
0028310430
-
A parallel DNA triplex as a model for the intermediate in homologous recombination
-
Zhurkin V.B., Raghunathan G., Ulyanov N.B., Camerini-Otero R.D., and Jernigan R.L. A parallel DNA triplex as a model for the intermediate in homologous recombination. J. Mol. Biol. 239 (1994) 181-200
-
(1994)
J. Mol. Biol.
, vol.239
, pp. 181-200
-
-
Zhurkin, V.B.1
Raghunathan, G.2
Ulyanov, N.B.3
Camerini-Otero, R.D.4
Jernigan, R.L.5
|