Anoxybacillus voinovskiensis sp. nov., a moderately thermophilic bacterium from a hot spring in Kamchatka

International Journal of Systematic and Evolutionary Microbiology

Volumn 54, Issue 4, 2004, Pages 1239-1242

  Yumoto, Isao ^a   Hirota, Kikue ^a   Kawahara, Tomoo ^a,b   Nodasaka, Yoshinobu ^c   Okuyama, Hidetoshi ^c   Matsuyama, Hidetoshi ^b   Yokota, Yuji ^a   Nakajima, Kenji ^a   Hoshino, Tamotsu ^a  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b TOKAI UNIVERSITY   (Japan)

^c HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CATALASE; DNA; NITRATE; OXIDOREDUCTASE; RNA 16S; SODIUM CHLORIDE;

AEROBIC BACTERIUM; ANOXYBACILLUS FLAVITHERMUS; ANOXYBACILLUS PUSHCHINOENSIS; ANOXYBACILLUS VOINOVSKIENSIS; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CONTROLLED STUDY; DNA DETERMINATION; DNA DNA HYBRIDIZATION; GRAM POSITIVE BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RNA SEQUENCE; RUSSIAN FEDERATION; SEQUENCE ANALYSIS; TEMPERATURE DEPENDENCE; THERMOPHILIC BACTERIUM;

AEROBIOSIS; ANAEROBIOSIS; BACILLACEAE; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CATALASE; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; GENTIAN VIOLET; GROWTH INHIBITORS; HOT SPRINGS; HYDROGEN SULFIDE; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; MOVEMENT; NITRATES; NUCLEIC ACID HYBRIDIZATION; OXIDATION-REDUCTION; OXIDOREDUCTASES; PHENAZINES; PHYLOGENY; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; RUSSIA; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SODIUM CHLORIDE; TEMPERATURE; WATER MICROBIOLOGY;

ANOXYBACILLUS; ANOXYBACILLUS FLAVITHERMUS; ANOXYBACILLUS PUSHCHINOENSIS; ANOXYBACILLUS VOINOVSKIENSIS; BACTERIA (MICROORGANISMS); POSIBACTERIA;

EID: 4344708161     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.02889-0     Document Type: Article

References (21)

1. Barrow, G. I. & Feltham, R. K. A. (editors) (1993). Cowan and Steel's Manual for the Identification of Medical Bacteria, 3rd edn. Cambridge: Cambridge University Press.
2. Belduz, A. O., Dulger, S. & Demirbag, Z. (2003). Anoxybacillus gonensis sp. nov., a moderately thermophilic, xylose-utilizing, endospore-forming bacterium. Int J Syst Evol Microbiol 53, 1315-1320.
3. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
4. Hanada, S., Hiraishi, A., Shimada, K. & Matsuura, K. (1995). Chloroflexus aggregans sp. nov., a filamentous phototrophic bacterium which forms dense cell aggregates by active gliding movement. Int J Syst Bacteriol 45, 676-681.
5. Hanada, S., Takaichi, S., Matsuura, K. & Nakamura, K. (2002). Roseiflexus castenholzii gen. nov., sp. nov., a thermophilic, filamentous, photosynthetic bacterium that lacks chlorosomes. Int J Syst Evol Microbiol 52, 187-193.
6. Heinen, W., Lauwers, A. M. & Mulders, J. W. M. (1982). Bacillus flavothermus, a newly isolated facultative thermophile. Antonie van Leeuwenhoek 48, 265-272.
7. Hiraishi, A., Umezawa, T., Yamamoto, H., Kato, K. & Yonosuke, M. (1999). Changes in quinone profiles of hot spring microbial mats with a thermal gradient. Appl Environ Microbiol 65, 198-205.
8. Hugh, R. & Leifson, E. (1953). The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram-negative bacteria. J Bacteriol 66, 24-26.
9. Kawasaki, K., Nogi, Y., Hishinuma, M., Nodasaka, Y., Matsuyama, H. & Yumoto, I. (2002). Psychromonas marina sp. nov., a novel halophilic, facultatively psychrophilic bacterium isolated from the coast of the Okhotsk Sea. Int J Syst Evol Microbiol 52, 1455-1459.
10. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
11. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3, 208-218.
12. Nübel, U., Bateson, M. M., Vandieken, V., Wieland, A., Kühl, M. & Ward, D. M. (2002). Microscopic examination of distribution and phenotypic properties of phylogenetically diverse Chloroflexaceae-related bacteria in hot spring microbial mat. Appl Environ Microbiol 68, 4593-4603.
13. Pierson, B. K., Giovannoni, S. J., Stahl, D. A. & Castenholz, R. W. (1985). Heliothrix oregonensis, gen. nov., a phototrophic filamentous gliding bacterium containing bacteriochlorophyll a. Arch Microbiol 142, 164-167.
14. Pikuta, E., Lysenko, A., Chuvilskaya, N., Mendrock, U., Hippe, H., Suzina, N., Nikitin, D., Osipov, G. & Laurinavichius, K. (2000). Anoxybacillus pushchinensis gen. nov., sp. nov., a novel anaerobic bacterium from manure, and description of Anoxybacillus flavithermus comb. nov. Int J Syst Evol Microbiol 50, 2109-2117.
15. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
16. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
17. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
18. Yamamoto, H., Hiraishi, A., Kato, K., Chiura, H. X., Maki, Y. & Shimizu, A. (1998). Phylogenetic evidence for the existence of novel thermophilic bacteria in hot spring sulfur-turf microbial mats in Japan. Appl Environ Microbiol 64, 1680-1687.
19. Yumoto, I., Yamazaki, K., Hishinuma, M., Nodasaka, Y., Inoue, N. & Kawasaki, K. (2000). Identification of facultatively alkaliphilic Bacillus sp. strain YN-2000 and its fatty acid composition and cell-surface aspects depending on culture pH. Extremophiles 4, 285-290.
20. Yumoto, I., Yamazaki, K., Hishinuma, M., Nodasaka, Y., Suemori, A., Nakajima, K., Inoue, N. & Kawasaki, K. (2001). Pseudomonas alcaliphila sp. nov., a novel facultatively psychrophilic alkaliphile isolated from seawater. Int J Syst Evol Microbiol 51, 349-355.
21. Yumoto, I., Nakamura, A., Iwata, H., Kojima, K., Kusumoto, K., Nodasaka, Y. & Matsuyama, H. (2002). Dietzia psychralcaliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons. Int J Syst Evol Microbiol 52, 85-90.